RNA–Protein interactions for RNA: ENST00000546279.5

LMO3-233, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-233ENST00000546279 RNF181Q9P0P0 153 aa13.69□□□□□ -0.22
LMO3-233ENST00000546279 PARP3Q9Y6F1 533 aa13.69□□□□□ -0.22
LMO3-233ENST00000546279 MAP3K15Q6ZN16 1313 aa13.68□□□□□ -0.22
LMO3-233ENST00000546279 A0A087WZG4 1122 aa13.68□□□□□ -0.22
LMO3-233ENST00000546279 TM4SF1P30408 202 aa13.68□□□□□ -0.22
LMO3-233ENST00000546279 DALRD3Q5D0E6 543 aaKnown RBP13.68□□□□□ -0.22
LMO3-233ENST00000546279 LAMB2P55268 1798 aa13.68□□□□□ -0.22
LMO3-233ENST00000546279 DDX60Q8IY21 1712 aaKnown RBP13.67□□□□□ -0.22
LMO3-233ENST00000546279 ZC3H4Q9UPT8 1303 aaKnown RBP13.67□□□□□ -0.22
LMO3-233ENST00000546279 ERVV-1B6SEH8 477 aa13.67□□□□□ -0.22
LMO3-233ENST00000546279 SLC34A2O95436 690 aa13.67□□□□□ -0.22
LMO3-233ENST00000546279 BRCA1P38398 1863 aaKnown RBP13.66□□□□□ -0.22
LMO3-233ENST00000546279 RFC4P35249 363 aa13.66□□□□□ -0.22
LMO3-233ENST00000546279 DDR1Q08345 913 aa13.66□□□□□ -0.22
LMO3-233ENST00000546279 FLIIQ13045 1269 aa13.66□□□□□ -0.22
LMO3-233ENST00000546279 TNRC6CQ9HCJ0 1690 aaKnown RBP13.66□□□□□ -0.22
LMO3-233ENST00000546279 DLEC1Q9Y238 1755 aa13.66□□□□□ -0.22
LMO3-233ENST00000546279 COL11A2P13942 1736 aaPredicted RBP13.65□□□□□ -0.22
LMO3-233ENST00000546279 BCAR3O75815 825 aa13.65□□□□□ -0.22
LMO3-233ENST00000546279 VEGFAP15692 232 aaPredicted RBP13.65□□□□□ -0.22
LMO3-233ENST00000546279 KCNA3P22001 575 aa13.65□□□□□ -0.22
LMO3-233ENST00000546279 CLEC4GQ6UXB4 293 aa13.65□□□□□ -0.22
LMO3-233ENST00000546279 GIGYF2Q6Y7W6 1299 aaKnown RBP13.65□□□□□ -0.22
LMO3-233ENST00000546279 ZNF34Q8IZ26 560 aa13.65□□□□□ -0.22
LMO3-233ENST00000546279 PLBD2Q8NHP8 589 aa13.65□□□□□ -0.22
LMO3-233ENST00000546279 BCL2L13Q9BXK5 485 aa13.65□□□□□ -0.22
LMO3-233ENST00000546279 CHMP4AQ9BY43 222 aa13.65□□□□□ -0.22
LMO3-233ENST00000546279 UBN2Q6ZU65 1347 aa13.64□□□□□ -0.23
LMO3-233ENST00000546279 PCNTO95613 3336 aa13.64□□□□□ -0.23
LMO3-233ENST00000546279 AIMP1Q12904 312 aaKnown RBP13.64□□□□□ -0.23
LMO3-233ENST00000546279 NFIXQ14938 502 aa13.64□□□□□ -0.23
LMO3-233ENST00000546279 TBC1D9BQ66K14 1250 aa13.64□□□□□ -0.23
LMO3-233ENST00000546279 ISCA1Q9BUE6 129 aa13.64□□□□□ -0.23
LMO3-233ENST00000546279 STK31Q9BXU1 1019 aa13.64□□□□□ -0.23
LMO3-233ENST00000546279 ZBTB3Q9H5J0 574 aa13.64□□□□□ -0.23
LMO3-233ENST00000546279 ZNF330Q9Y3S2 320 aaPredicted RBP13.64□□□□□ -0.23
LMO3-233ENST00000546279 MYH3P11055 1940 aa13.63□□□□□ -0.23
LMO3-233ENST00000546279 POLRMTO00411 1230 aaKnown RBP13.63□□□□□ -0.23
LMO3-233ENST00000546279 KSR2Q6VAB6 950 aa13.63□□□□□ -0.23
LMO3-233ENST00000546279 ANKRD13DQ6ZTN6 518 aa13.63□□□□□ -0.23
LMO3-233ENST00000546279 ARFGEF1Q9Y6D6 1849 aa13.62□□□□□ -0.23
LMO3-233ENST00000546279 IBTKQ9P2D0 1353 aaPredicted RBP13.62□□□□□ -0.23
LMO3-233ENST00000546279 PI4KAP2A4QPH2 592 aa13.62□□□□□ -0.23
LMO3-233ENST00000546279 ZPR1O75312 459 aa13.62□□□□□ -0.23
LMO3-233ENST00000546279 IGKV5-2P06315 115 aa13.62□□□□□ -0.23
LMO3-233ENST00000546279 PI4KAP1Q8N8J0 262 aa13.62□□□□□ -0.23
LMO3-233ENST00000546279 SMC4Q9NTJ3 1288 aa13.62□□□□□ -0.23
LMO3-233ENST00000546279 TNNQ9UQP3 1299 aa13.62□□□□□ -0.23
LMO3-233ENST00000546279 CARMIL3Q8ND23 1372 aa13.61□□□□□ -0.23
LMO3-233ENST00000546279 GLTPD2A6NH11 291 aa13.61□□□□□ -0.23
LMO3-233ENST00000546279 TRIM28Q13263 835 aaKnown RBP13.61□□□□□ -0.23
LMO3-233ENST00000546279 TCIRG1Q13488 830 aa13.61□□□□□ -0.23
LMO3-233ENST00000546279 KIF6Q6ZMV9 814 aa13.61□□□□□ -0.23
LMO3-233ENST00000546279 METTL22Q9BUU2 404 aaPredicted RBP13.61□□□□□ -0.23
LMO3-233ENST00000546279 PCDH10Q9P2E7 1040 aa13.61□□□□□ -0.23
LMO3-233ENST00000546279 F6X3S4 739 aa13.6□□□□□ -0.23
LMO3-233ENST00000546279 LMNB1P20700 586 aa13.6□□□□□ -0.23
LMO3-233ENST00000546279 NLRP10Q86W26 655 aa13.6□□□□□ -0.23
LMO3-233ENST00000546279 PRDM10Q9NQV6 1147 aa13.6□□□□□ -0.23
LMO3-233ENST00000546279 MAP3K2Q9Y2U5 619 aa13.6□□□□□ -0.23
LMO3-233ENST00000546279 PTPRCP08575 1304 aa13.6□□□□□ -0.23
LMO3-233ENST00000546279 COL4A1P02462 1669 aa13.59□□□□□ -0.23
LMO3-233ENST00000546279 TAF1P21675 1872 aa13.59□□□□□ -0.23
LMO3-233ENST00000546279 RIC1Q4ADV7 1423 aa13.59□□□□□ -0.23
LMO3-233ENST00000546279 NTSR2O95665 410 aa13.59□□□□□ -0.23
LMO3-233ENST00000546279 BEND3Q5T5X7 828 aa13.59□□□□□ -0.23
LMO3-233ENST00000546279 ARHGAP45Q92619 1136 aa13.59□□□□□ -0.23
LMO3-233ENST00000546279 RCAN3Q9UKA8 241 aa13.59□□□□□ -0.23
LMO3-233ENST00000546279 NOB1Q9ULX3 412 aaKnown RBP13.59□□□□□ -0.23
LMO3-233ENST00000546279 ABCC4O15439 1325 aa13.59□□□□□ -0.23
LMO3-233ENST00000546279 ABCC12Q96J65 1359 aa13.58□□□□□ -0.23
LMO3-233ENST00000546279 FKBP5Q13451 457 aaPredicted RBP13.58□□□□□ -0.24
LMO3-233ENST00000546279 SUSD4Q5VX71 490 aa13.58□□□□□ -0.24
LMO3-233ENST00000546279 PRR5LQ6MZQ0 368 aa13.58□□□□□ -0.24
LMO3-233ENST00000546279 DPY19L2Q6NUT2 758 aa13.58□□□□□ -0.24
LMO3-233ENST00000546279 DNAAF4Q8WXU2 420 aa13.58□□□□□ -0.24
LMO3-233ENST00000546279 CREBZFQ9NS37 354 aa13.58□□□□□ -0.24
LMO3-233ENST00000546279 RNF123Q5XPI4 1314 aa13.58□□□□□ -0.24
LMO3-233ENST00000546279 TRIM27P14373 513 aa13.57□□□□□ -0.24
LMO3-233ENST00000546279 GPTP24298 496 aa13.57□□□□□ -0.24
LMO3-233ENST00000546279 CASP7P55210 303 aa13.57□□□□□ -0.24
LMO3-233ENST00000546279 NIP7Q9Y221 180 aaKnown RBP eCLIP13.57□□□□□ -0.24
LMO3-233ENST00000546279 ZNF652Q9Y2D9 606 aa13.57□□□□□ -0.24
LMO3-233ENST00000546279 KIF16BQ96L93 1317 aa13.57□□□□□ -0.24
LMO3-233ENST00000546279 CACNA1SQ13698 1873 aa13.57□□□□□ -0.24
LMO3-233ENST00000546279 NEURL1BA8MQ27 555 aa13.56□□□□□ -0.24
LMO3-233ENST00000546279 ATP5J2-PTCD1G3V325 749 aa13.56□□□□□ -0.24
LMO3-233ENST00000546279 DDX58O95786 925 aaKnown RBP13.56□□□□□ -0.24
LMO3-233ENST00000546279 SERPINB2P05120 415 aa13.56□□□□□ -0.24
LMO3-233ENST00000546279 RLBP1P12271 317 aa13.56□□□□□ -0.24
LMO3-233ENST00000546279 CHRNA5P30532 468 aa13.56□□□□□ -0.24
LMO3-233ENST00000546279 CWF19L2Q2TBE0 894 aaKnown RBP13.56□□□□□ -0.24
LMO3-233ENST00000546279 HSP90AB3PQ58FF7 597 aa13.56□□□□□ -0.24
LMO3-233ENST00000546279 BICDL1Q6ZP65 573 aa13.56□□□□□ -0.24
LMO3-233ENST00000546279 RIC3Q7Z5B4 369 aa13.56□□□□□ -0.24
LMO3-233ENST00000546279 SYNE4Q8N205 404 aa13.56□□□□□ -0.24
LMO3-233ENST00000546279 AIDAQ96BJ3 306 aa13.56□□□□□ -0.24
LMO3-233ENST00000546279 MYD88Q99836 296 aa13.56□□□□□ -0.24
LMO3-233ENST00000546279 CTCFP49711 727 aaPredicted RBP13.55□□□□□ -0.24
LMO3-233ENST00000546279 PARP10Q53GL7 1025 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms