RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 ERFEQ4G0M1 354 aa26.44■■□□□ 1.82
SCARB1-211ENST00000546215 BRIP1Q9BX63 1249 aa26.44■■□□□ 1.82
SCARB1-211ENST00000546215 KIF16BQ96L93 1317 aa26.44■■□□□ 1.82
SCARB1-211ENST00000546215 GTF2E1P29083 439 aaPredicted RBP26.43■■□□□ 1.82
SCARB1-211ENST00000546215 CWF19L2Q2TBE0 894 aaKnown RBP26.43■■□□□ 1.82
SCARB1-211ENST00000546215 TRMT112Q9UI30 125 aaKnown RBP26.43■■□□□ 1.82
SCARB1-211ENST00000546215 NEURL1BA8MQ27 555 aa26.42■■□□□ 1.82
SCARB1-211ENST00000546215 TGFB2P61812 414 aa26.42■■□□□ 1.82
SCARB1-211ENST00000546215 BEND3Q5T5X7 828 aa26.42■■□□□ 1.82
SCARB1-211ENST00000546215 RNF123Q5XPI4 1314 aa26.42■■□□□ 1.82
SCARB1-211ENST00000546215 ANKRD31Q8N7Z5 1873 aa26.42■■□□□ 1.82
SCARB1-211ENST00000546215 LINS1Q8NG48 757 aa26.42■■□□□ 1.82
SCARB1-211ENST00000546215 CWC25Q9NXE8 425 aaPredicted RBP26.42■■□□□ 1.82
SCARB1-211ENST00000546215 ARHGAP45Q92619 1136 aa26.41■■□□□ 1.82
SCARB1-211ENST00000546215 ABCC12Q96J65 1359 aa26.41■■□□□ 1.82
SCARB1-211ENST00000546215 SLC4A10Q6U841 1118 aa26.41■■□□□ 1.82
SCARB1-211ENST00000546215 SYNE4Q8N205 404 aa26.41■■□□□ 1.82
SCARB1-211ENST00000546215 KIAA1551Q9HCM1 1747 aa26.4■■□□□ 1.82
SCARB1-211ENST00000546215 SH3TC1Q8TE82 1336 aa26.4■■□□□ 1.82
SCARB1-211ENST00000546215 PXDNLA1KZ92 1463 aa26.39■■□□□ 1.82
SCARB1-211ENST00000546215 SLC10A5Q5PT55 438 aa26.39■■□□□ 1.82
SCARB1-211ENST00000546215 ZBTB38Q8NAP3 1195 aaPredicted RBP26.39■■□□□ 1.82
SCARB1-211ENST00000546215 FAM89AQ96GI7 184 aa26.39■■□□□ 1.82
SCARB1-211ENST00000546215 RCAN3Q9UKA8 241 aa26.39■■□□□ 1.82
SCARB1-211ENST00000546215 A0A0G2JLW4 131 aa26.38■■□□□ 1.81
SCARB1-211ENST00000546215 PDE6BP35913 854 aa26.38■■□□□ 1.81
SCARB1-211ENST00000546215 API5Q9BZZ5 524 aaKnown RBP26.38■■□□□ 1.81
SCARB1-211ENST00000546215 N4BP2Q86UW6 1770 aaPredicted RBP26.38■■□□□ 1.81
SCARB1-211ENST00000546215 KLRG2A4D1S0 409 aaPredicted RBP26.37■■□□□ 1.81
SCARB1-211ENST00000546215 IPO8O15397 1037 aaKnown RBP26.37■■□□□ 1.81
SCARB1-211ENST00000546215 DPEP1P16444 411 aa26.37■■□□□ 1.81
SCARB1-211ENST00000546215 KCNA3P22001 575 aa26.37■■□□□ 1.81
SCARB1-211ENST00000546215 GCKRQ14397 625 aa26.37■■□□□ 1.81
SCARB1-211ENST00000546215 FRAT1Q92837 279 aaPredicted RBP26.37■■□□□ 1.81
SCARB1-211ENST00000546215 RIC1Q4ADV7 1423 aa26.37■■□□□ 1.81
SCARB1-211ENST00000546215 PCCAP05165 728 aaPredicted RBP26.37■■□□□ 1.81
SCARB1-211ENST00000546215 CHRNA5P30532 468 aa26.37■■□□□ 1.81
SCARB1-211ENST00000546215 RTL5Q5HYW3 569 aaPredicted RBP26.37■■□□□ 1.81
SCARB1-211ENST00000546215 SRCIN1Q9C0H9 1055 aa26.36■■□□□ 1.81
SCARB1-211ENST00000546215 ALDH1L1O75891 902 aa26.35■■□□□ 1.81
SCARB1-211ENST00000546215 TRIM27P14373 513 aa26.35■■□□□ 1.81
SCARB1-211ENST00000546215 ATF7IPQ6VMQ6 1270 aa26.35■■□□□ 1.81
SCARB1-211ENST00000546215 C2CD5Q86YS7 1000 aa26.35■■□□□ 1.81
SCARB1-211ENST00000546215 PDZRN3Q9UPQ7 1066 aa26.35■■□□□ 1.81
SCARB1-211ENST00000546215 TNRC6CQ9HCJ0 1690 aaKnown RBP26.34■■□□□ 1.81
SCARB1-211ENST00000546215 HCLS1P14317 486 aaPredicted RBP26.34■■□□□ 1.81
SCARB1-211ENST00000546215 JARID2Q92833 1246 aaPredicted RBP26.34■■□□□ 1.81
SCARB1-211ENST00000546215 H0YIN7 160 aa26.33■■□□□ 1.81
SCARB1-211ENST00000546215 H7C1W4 665 aa26.33■■□□□ 1.81
SCARB1-211ENST00000546215 ZKSCAN2Q63HK3 967 aa26.33■■□□□ 1.81
SCARB1-211ENST00000546215 IRS4O14654 1257 aaPredicted RBP26.33■■□□□ 1.8
SCARB1-211ENST00000546215 SRGNP10124 158 aa26.33■■□□□ 1.8
SCARB1-211ENST00000546215 CRY2Q49AN0 593 aa26.33■■□□□ 1.8
SCARB1-211ENST00000546215 C3orf67Q6ZVT6 689 aa26.33■■□□□ 1.8
SCARB1-211ENST00000546215 NLRP3Q96P20 1036 aa26.33■■□□□ 1.8
SCARB1-211ENST00000546215 TNNQ9UQP3 1299 aa26.33■■□□□ 1.8
SCARB1-211ENST00000546215 COL11A2P13942 1736 aaPredicted RBP26.32■■□□□ 1.8
SCARB1-211ENST00000546215 DDX60Q8IY21 1712 aaKnown RBP26.32■■□□□ 1.8
SCARB1-211ENST00000546215 ABCC4O15439 1325 aa26.31■■□□□ 1.8
SCARB1-211ENST00000546215 UTRNP46939 3433 aa26.31■■□□□ 1.8
SCARB1-211ENST00000546215 CASP7P55210 303 aa26.31■■□□□ 1.8
SCARB1-211ENST00000546215 CDHR2Q9BYE9 1310 aa26.31■■□□□ 1.8
SCARB1-211ENST00000546215 BRCA1P38398 1863 aaKnown RBP26.3■■□□□ 1.8
SCARB1-211ENST00000546215 UBE3BQ7Z3V4 1068 aa26.3■■□□□ 1.8
SCARB1-211ENST00000546215 DLEC1Q9Y238 1755 aa26.29■■□□□ 1.8
SCARB1-211ENST00000546215 CCT4P50991 539 aaKnown RBP26.29■■□□□ 1.8
SCARB1-211ENST00000546215 GRM8O00222 908 aa26.29■■□□□ 1.8
SCARB1-211ENST00000546215 CLUAP1Q96AJ1 413 aa26.29■■□□□ 1.8
SCARB1-211ENST00000546215 MASTLQ96GX5 879 aa26.29■■□□□ 1.8
SCARB1-211ENST00000546215 PIM2Q9P1W9 311 aa26.29■■□□□ 1.8
SCARB1-211ENST00000546215 LAMB2P55268 1798 aa26.28■■□□□ 1.8
SCARB1-211ENST00000546215 NPR1P16066 1061 aa26.28■■□□□ 1.8
SCARB1-211ENST00000546215 INTS3Q68E01 1043 aaKnown RBP26.28■■□□□ 1.8
SCARB1-211ENST00000546215 HSP90B1P14625 803 aaKnown RBP26.27■■□□□ 1.8
SCARB1-211ENST00000546215 STYK1Q6J9G0 422 aa26.27■■□□□ 1.8
SCARB1-211ENST00000546215 ZNF622Q969S3 477 aaKnown RBP eCLIP26.27■■□□□ 1.81e-7■□□□□ 9.5
SCARB1-211ENST00000546215 C9orf78Q9NZ63 289 aaPredicted RBP26.27■■□□□ 1.8
SCARB1-211ENST00000546215 WWC3Q9ULE0 1092 aa26.27■■□□□ 1.8
SCARB1-211ENST00000546215 PDE8AO60658 829 aa26.26■■□□□ 1.79
SCARB1-211ENST00000546215 HOXA10P31260 410 aaPredicted RBP26.25■■□□□ 1.79
SCARB1-211ENST00000546215 SF3B3Q15393 1217 aaKnown RBP26.25■■□□□ 1.79
SCARB1-211ENST00000546215 USP44Q9H0E7 712 aa26.25■■□□□ 1.79
SCARB1-211ENST00000546215 UTYO14607 1347 aa26.25■■□□□ 1.79
SCARB1-211ENST00000546215 NBPF7P0C2Y1 421 aaPredicted RBP26.24■■□□□ 1.79
SCARB1-211ENST00000546215 RPGRQ92834 1020 aaKnown RBP26.24■■□□□ 1.79
SCARB1-211ENST00000546215 PLA2G12BQ9BX93 195 aa26.24■■□□□ 1.79
SCARB1-211ENST00000546215 DALRD3Q5D0E6 543 aaKnown RBP26.24■■□□□ 1.79
SCARB1-211ENST00000546215 DZIP1LQ8IYY4 767 aaKnown RBP26.24■■□□□ 1.79
SCARB1-211ENST00000546215 TTLL6Q8N841 843 aa26.24■■□□□ 1.79
SCARB1-211ENST00000546215 PLIN1O60240 522 aa26.23■■□□□ 1.79
SCARB1-211ENST00000546215 RLBP1P12271 317 aa26.23■■□□□ 1.79
SCARB1-211ENST00000546215 TMEM57Q8N5G2 664 aa26.23■■□□□ 1.79
SCARB1-211ENST00000546215 CNKSR1Q969H4 720 aa26.23■■□□□ 1.79
SCARB1-211ENST00000546215 YBX3P16989 372 aaKnown RBP eCLIP26.22■■□□□ 1.791e-6■□□□□ 8
SCARB1-211ENST00000546215 BCS1LQ9Y276 419 aa26.22■■□□□ 1.79
SCARB1-211ENST00000546215 CTSWP56202 376 aa26.21■■□□□ 1.79
SCARB1-211ENST00000546215 FTSJ3Q8IY81 847 aaKnown RBP26.21■■□□□ 1.79
SCARB1-211ENST00000546215 ALDH1B1P30837 517 aa26.2■■□□□ 1.79
SCARB1-211ENST00000546215 PELP1Q8IZL8 1130 aaKnown RBP26.2■■□□□ 1.79
SCARB1-211ENST00000546215 TTLL11Q8NHH1 800 aa26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms