RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 HOXB4P17483 251 aaPredicted RBP5.34□□□□□ -1.55
CUL3-215ENST00000546102 ATP4AP20648 1035 aa5.34□□□□□ -1.55
CUL3-215ENST00000546102 RASA1P20936 1047 aa5.34□□□□□ -1.55
CUL3-215ENST00000546102 TNP2Q05952 138 aa5.34□□□□□ -1.55
CUL3-215ENST00000546102 DOC2BQ14184 412 aa5.34□□□□□ -1.55
CUL3-215ENST00000546102 LARP1Q6PKG0 1096 aaKnown RBP5.34□□□□□ -1.55
CUL3-215ENST00000546102 PHTF2Q8N3S3 785 aa5.34□□□□□ -1.55
CUL3-215ENST00000546102 FAM200AQ8TCP9 573 aa5.34□□□□□ -1.55
CUL3-215ENST00000546102 GIPC2Q8TF65 315 aa5.34□□□□□ -1.55
CUL3-215ENST00000546102 DNAAF2Q9NVR5 837 aaKnown RBP5.34□□□□□ -1.55
CUL3-215ENST00000546102 MARK1Q9P0L2 795 aa5.34□□□□□ -1.55
CUL3-215ENST00000546102 BIN2Q9UBW5 565 aaPredicted RBP5.34□□□□□ -1.55
CUL3-215ENST00000546102 SERTAD1Q9UHV2 236 aa5.34□□□□□ -1.55
CUL3-215ENST00000546102 BACH1O14867 736 aa5.33□□□□□ -1.56
CUL3-215ENST00000546102 FAM157BP0CG42 384 aa5.33□□□□□ -1.56
CUL3-215ENST00000546102 ATP2B4P23634 1241 aa5.33□□□□□ -1.56
CUL3-215ENST00000546102 SCNN1AP37088 669 aa5.33□□□□□ -1.56
CUL3-215ENST00000546102 SCNN1DP51172 638 aa5.33□□□□□ -1.56
CUL3-215ENST00000546102 PCBP4P57723 403 aaKnown RBP5.33□□□□□ -1.56
CUL3-215ENST00000546102 FAM69CQ0P6D2 419 aa5.33□□□□□ -1.56
CUL3-215ENST00000546102 PTK7Q13308 1070 aa5.33□□□□□ -1.56
CUL3-215ENST00000546102 NCOA4Q13772 614 aa5.33□□□□□ -1.56
CUL3-215ENST00000546102 TSGA10IPQ3SY00 556 aa5.33□□□□□ -1.56
CUL3-215ENST00000546102 ZNF468Q5VIY5 522 aaPredicted RBP5.33□□□□□ -1.56
CUL3-215ENST00000546102 PLPP7Q8NBV4 271 aa5.33□□□□□ -1.56
CUL3-215ENST00000546102 CLP1Q92989 425 aaKnown RBP5.33□□□□□ -1.56
CUL3-215ENST00000546102 PLVAPQ9BX97 442 aa5.33□□□□□ -1.56
CUL3-215ENST00000546102 CFTRP13569 1480 aa5.32□□□□□ -1.56
CUL3-215ENST00000546102 SCO2A0A1W2PP80 73 aa5.32□□□□□ -1.56
CUL3-215ENST00000546102 A6NJY4 79 aa5.32□□□□□ -1.56
CUL3-215ENST00000546102 CDK2AP1O14519 115 aa5.32□□□□□ -1.56
CUL3-215ENST00000546102 HMGB1P09429 215 aaKnown RBP5.32□□□□□ -1.56
CUL3-215ENST00000546102 NEUROD1Q13562 356 aa5.32□□□□□ -1.56
CUL3-215ENST00000546102 LAMC2Q13753 1193 aa5.32□□□□□ -1.56
CUL3-215ENST00000546102 ZMYM1Q5SVZ6 1142 aa5.32□□□□□ -1.56
CUL3-215ENST00000546102 FCHSD1Q86WN1 690 aa5.32□□□□□ -1.56
CUL3-215ENST00000546102 ABCC8Q09428 1581 aa5.31□□□□□ -1.56
CUL3-215ENST00000546102 LAMC3Q9Y6N6 1575 aa5.31□□□□□ -1.56
CUL3-215ENST00000546102 ELOA3CA0A087WX78 387 aaPredicted RBP5.31□□□□□ -1.56
CUL3-215ENST00000546102 ANKRD33BA6NCL7 494 aa5.31□□□□□ -1.56
CUL3-215ENST00000546102 ELOA3DA6NLF2 546 aaPredicted RBP5.31□□□□□ -1.56
CUL3-215ENST00000546102 HSP90B1P14625 803 aaKnown RBP5.31□□□□□ -1.56
CUL3-215ENST00000546102 TCF3P15923 654 aa5.31□□□□□ -1.56
CUL3-215ENST00000546102 PSME1Q06323 249 aa5.31□□□□□ -1.56
CUL3-215ENST00000546102 DPYDQ12882 1025 aa5.31□□□□□ -1.56
CUL3-215ENST00000546102 EML3Q32P44 896 aa5.31□□□□□ -1.56
CUL3-215ENST00000546102 ELOA3BQ3SY89 546 aa5.31□□□□□ -1.56
CUL3-215ENST00000546102 ANKMY2Q8IV38 441 aa5.31□□□□□ -1.56
CUL3-215ENST00000546102 ELOA3Q8NG57 546 aa5.31□□□□□ -1.56
CUL3-215ENST00000546102 NACC1Q96RE7 527 aa5.31□□□□□ -1.56
CUL3-215ENST00000546102 ZIC5Q96T25 663 aa5.31□□□□□ -1.56
CUL3-215ENST00000546102 WRNQ14191 1432 aaPredicted RBP eCLIP5.31□□□□□ -1.56
CUL3-215ENST00000546102 SAMD5Q5TGI4 173 aa5.3□□□□□ -1.56
CUL3-215ENST00000546102 SYT9Q86SS6 491 aa5.3□□□□□ -1.56
CUL3-215ENST00000546102 NPAS4Q8IUM7 802 aa5.3□□□□□ -1.56
CUL3-215ENST00000546102 ZNF594Q96JF6 807 aaPredicted RBP5.3□□□□□ -1.56
CUL3-215ENST00000546102 PUS7Q96PZ0 661 aaKnown RBP5.3□□□□□ -1.56
CUL3-215ENST00000546102 CHIC2Q9UKJ5 165 aa5.3□□□□□ -1.56
CUL3-215ENST00000546102 CHMP3Q9Y3E7 222 aa5.3□□□□□ -1.56
CUL3-215ENST00000546102 CADPSQ9ULU8 1353 aa5.29□□□□□ -1.56
CUL3-215ENST00000546102 TRIM28Q13263 835 aaKnown RBP5.29□□□□□ -1.56
CUL3-215ENST00000546102 MTFR1Q15390 333 aa5.29□□□□□ -1.56
CUL3-215ENST00000546102 TRIM11Q96F44 468 aa5.29□□□□□ -1.56
CUL3-215ENST00000546102 PSMG3-AS1Q96PY0 264 aa5.29□□□□□ -1.56
CUL3-215ENST00000546102 SLC4A9Q96Q91 983 aa5.29□□□□□ -1.56
CUL3-215ENST00000546102 KLF15Q9UIH9 416 aa5.29□□□□□ -1.56
CUL3-215ENST00000546102 ZNF232Q9UNY5 417 aa5.29□□□□□ -1.56
CUL3-215ENST00000546102 NOD1Q9Y239 953 aa5.29□□□□□ -1.56
CUL3-215ENST00000546102 BIVM-ERCC5R4GMW8 1640 aa5.29□□□□□ -1.56
CUL3-215ENST00000546102 TOP2BQ02880 1626 aa5.28□□□□□ -1.56
CUL3-215ENST00000546102 TMEM229AB2RXF0 380 aa5.28□□□□□ -1.56
CUL3-215ENST00000546102 LZTS3O60299 673 aaPredicted RBP5.28□□□□□ -1.56
CUL3-215ENST00000546102 PRMT3O60678 531 aa5.28□□□□□ -1.56
CUL3-215ENST00000546102 ABL1P00519 1130 aa5.28□□□□□ -1.56
CUL3-215ENST00000546102 ZNF211Q13398 564 aaPredicted RBP5.28□□□□□ -1.56
CUL3-215ENST00000546102 SWI5Q1ZZU3 235 aa5.28□□□□□ -1.56
CUL3-215ENST00000546102 ZNF326Q5BKZ1 582 aaKnown RBP5.28□□□□□ -1.56
CUL3-215ENST00000546102 OGFOD1Q8N543 542 aa5.28□□□□□ -1.56
CUL3-215ENST00000546102 SYNJ1O43426 1573 aa5.28□□□□□ -1.56
CUL3-215ENST00000546102 H3BRB1 525 aa5.27□□□□□ -1.57
CUL3-215ENST00000546102 M0R082 166 aa5.27□□□□□ -1.57
CUL3-215ENST00000546102 SIN3BO75182 1162 aa5.27□□□□□ -1.57
CUL3-215ENST00000546102 CDK11BP21127 795 aaKnown RBP5.27□□□□□ -1.57
CUL3-215ENST00000546102 CLDN10P78369 228 aa5.27□□□□□ -1.57
CUL3-215ENST00000546102 FAM177A1Q8N128 213 aaPredicted RBP5.27□□□□□ -1.57
CUL3-215ENST00000546102 ZNF417Q8TAU3 575 aa5.27□□□□□ -1.57
CUL3-215ENST00000546102 ZNF587Q96SQ5 575 aaPredicted RBP5.27□□□□□ -1.57
CUL3-215ENST00000546102 TUT1Q9H6E5 874 aaKnown RBP5.27□□□□□ -1.57
CUL3-215ENST00000546102 ANO2Q9NQ90 1003 aa5.27□□□□□ -1.57
CUL3-215ENST00000546102 IQSEC3Q9UPP2 1182 aaPredicted RBP5.27□□□□□ -1.57
CUL3-215ENST00000546102 CDK11AQ9UQ88 783 aaPredicted RBP5.27□□□□□ -1.57
CUL3-215ENST00000546102 GPC6Q9Y625 555 aaPredicted RBP5.27□□□□□ -1.57
CUL3-215ENST00000546102 PARP3Q9Y6F1 533 aa5.27□□□□□ -1.57
CUL3-215ENST00000546102 EEA1Q15075 1411 aa5.26□□□□□ -1.57
CUL3-215ENST00000546102 EFSO43281 561 aa5.26□□□□□ -1.57
CUL3-215ENST00000546102 TAGLNQ01995 201 aaKnown RBP5.26□□□□□ -1.57
CUL3-215ENST00000546102 LRRC69Q6ZNQ3 347 aa5.26□□□□□ -1.57
CUL3-215ENST00000546102 NBPF11Q86T75 865 aa5.26□□□□□ -1.57
CUL3-215ENST00000546102 RHPN1Q8TCX5 695 aa5.26□□□□□ -1.57
CUL3-215ENST00000546102 L3MBTL2Q969R5 705 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms