RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 CNKSR1Q969H4 720 aa22.21■■□□□ 1.15
CD9-211ENST00000546073 ISCA1Q9BUE6 129 aa22.21■■□□□ 1.15
CD9-211ENST00000546073 BCORQ6W2J9 1755 aa22.2■■□□□ 1.14
CD9-211ENST00000546073 CHRNA5P30532 468 aa22.2■■□□□ 1.14
CD9-211ENST00000546073 ALDH1B1P30837 517 aa22.2■■□□□ 1.14
CD9-211ENST00000546073 ERFEQ4G0M1 354 aa22.2■■□□□ 1.14
CD9-211ENST00000546073 G2E3Q7L622 706 aa22.2■■□□□ 1.14
CD9-211ENST00000546073 TTLL6Q8N841 843 aa22.2■■□□□ 1.14
CD9-211ENST00000546073 MASTLQ96GX5 879 aa22.2■■□□□ 1.14
CD9-211ENST00000546073 UBN2Q6ZU65 1347 aa22.2■■□□□ 1.14
CD9-211ENST00000546073 IPO8O15397 1037 aaKnown RBP22.19■■□□□ 1.14
CD9-211ENST00000546073 NTSR2O95665 410 aa22.19■■□□□ 1.14
CD9-211ENST00000546073 NPR1P16066 1061 aa22.19■■□□□ 1.14
CD9-211ENST00000546073 SLC4A10Q6U841 1118 aa22.19■■□□□ 1.14
CD9-211ENST00000546073 SSH1Q8WYL5 1049 aa22.19■■□□□ 1.14
CD9-211ENST00000546073 STYK1Q6J9G0 422 aa22.18■■□□□ 1.14
CD9-211ENST00000546073 MRPL50Q8N5N7 158 aaKnown RBP22.18■■□□□ 1.14
CD9-211ENST00000546073 ZBTB38Q8NAP3 1195 aaPredicted RBP22.18■■□□□ 1.14
CD9-211ENST00000546073 RBM17Q96I25 401 aaKnown RBP22.18■■□□□ 1.14
CD9-211ENST00000546073 BCL2L13Q9BXK5 485 aa22.18■■□□□ 1.14
CD9-211ENST00000546073 WWC3Q9ULE0 1092 aa22.18■■□□□ 1.14
CD9-211ENST00000546073 KIF16BQ96L93 1317 aa22.17■■□□□ 1.14
CD9-211ENST00000546073 LINS1Q8NG48 757 aa22.17■■□□□ 1.14
CD9-211ENST00000546073 YTHDC1Q96MU7 727 aaKnown RBP22.17■■□□□ 1.14
CD9-211ENST00000546073 API5Q9BZZ5 524 aaKnown RBP22.16■■□□□ 1.14
CD9-211ENST00000546073 PXDNLA1KZ92 1463 aa22.15■■□□□ 1.14
CD9-211ENST00000546073 SRGNP10124 158 aa22.15■■□□□ 1.14
CD9-211ENST00000546073 SLC10A5Q5PT55 438 aa22.15■■□□□ 1.14
CD9-211ENST00000546073 SOGA3Q5TF21 947 aa22.15■■□□□ 1.14
CD9-211ENST00000546073 FAM89AQ96GI7 184 aa22.15■■□□□ 1.14
CD9-211ENST00000546073 SRCAPQ6ZRS2 3230 aa22.15■■□□□ 1.14
CD9-211ENST00000546073 IRS4O14654 1257 aaPredicted RBP22.14■■□□□ 1.13
CD9-211ENST00000546073 PCCAP05165 728 aaPredicted RBP22.14■■□□□ 1.13
CD9-211ENST00000546073 RARSP54136 660 aaKnown RBP22.14■■□□□ 1.13
CD9-211ENST00000546073 RTL5Q5HYW3 569 aaPredicted RBP22.14■■□□□ 1.13
CD9-211ENST00000546073 DDX46Q7L014 1031 aaKnown RBP22.14■■□□□ 1.13
CD9-211ENST00000546073 SRCIN1Q9C0H9 1055 aa22.14■■□□□ 1.13
CD9-211ENST00000546073 C9orf78Q9NZ63 289 aaPredicted RBP22.14■■□□□ 1.13
CD9-211ENST00000546073 ADCY9O60503 1353 aa22.13■■□□□ 1.13
CD9-211ENST00000546073 NEURL1BA8MQ27 555 aa22.13■■□□□ 1.13
CD9-211ENST00000546073 NUP98P52948 1817 aa22.13■■□□□ 1.13
CD9-211ENST00000546073 F6X3S4 739 aa22.12■■□□□ 1.13
CD9-211ENST00000546073 ALDH1L1O75891 902 aa22.12■■□□□ 1.13
CD9-211ENST00000546073 HCLS1P14317 486 aaPredicted RBP22.12■■□□□ 1.13
CD9-211ENST00000546073 ARHGAP27Q6ZUM4 889 aa22.12■■□□□ 1.13
CD9-211ENST00000546073 KLRG2A4D1S0 409 aaPredicted RBP22.11■■□□□ 1.13
CD9-211ENST00000546073 KCNA3P22001 575 aa22.11■■□□□ 1.13
CD9-211ENST00000546073 CWF19L2Q2TBE0 894 aaKnown RBP22.11■■□□□ 1.13
CD9-211ENST00000546073 FRAT1Q92837 279 aaPredicted RBP22.11■■□□□ 1.13
CD9-211ENST00000546073 NOB1Q9ULX3 412 aaKnown RBP22.11■■□□□ 1.13
CD9-211ENST00000546073 HDAC5Q9UQL6 1122 aa22.11■■□□□ 1.13
CD9-211ENST00000546073 PDE8AO60658 829 aa22.1■■□□□ 1.13
CD9-211ENST00000546073 BRPF1P55201 1214 aaPredicted RBP22.1■■□□□ 1.13
CD9-211ENST00000546073 GCKRQ14397 625 aa22.1■■□□□ 1.13
CD9-211ENST00000546073 NRXN2Q9P2S2 1712 aa22.1■■□□□ 1.13
CD9-211ENST00000546073 RIC1Q4ADV7 1423 aa22.09■■□□□ 1.13
CD9-211ENST00000546073 IGKV5-2P06315 115 aa22.09■■□□□ 1.13
CD9-211ENST00000546073 CCDC152Q4G0S7 254 aa22.09■■□□□ 1.13
CD9-211ENST00000546073 ARHGAP45Q92619 1136 aa22.09■■□□□ 1.13
CD9-211ENST00000546073 AFDNP55196 1824 aaKnown RBP22.08■■□□□ 1.13
CD9-211ENST00000546073 YBX3P16989 372 aaKnown RBP eCLIP22.08■■□□□ 1.13
CD9-211ENST00000546073 CCT4P50991 539 aaKnown RBP22.08■■□□□ 1.13
CD9-211ENST00000546073 CRY2Q49AN0 593 aa22.08■■□□□ 1.13
CD9-211ENST00000546073 BEND3Q5T5X7 828 aa22.08■■□□□ 1.13
CD9-211ENST00000546073 UBE3BQ7Z3V4 1068 aa22.08■■□□□ 1.13
CD9-211ENST00000546073 CRAMP1Q96RY5 1269 aa22.08■■□□□ 1.13
CD9-211ENST00000546073 ZNF219Q9P2Y4 722 aaPredicted RBP22.08■■□□□ 1.13
CD9-211ENST00000546073 ABCC12Q96J65 1359 aa22.08■■□□□ 1.12
CD9-211ENST00000546073 CACNA1FO60840 1977 aa22.07■■□□□ 1.12
CD9-211ENST00000546073 GRIPAP1Q4V328 841 aa22.07■■□□□ 1.12
CD9-211ENST00000546073 PRPF40BQ6NWY9 871 aaKnown RBP22.07■■□□□ 1.12
CD9-211ENST00000546073 CDHR2Q9BYE9 1310 aa22.06■■□□□ 1.12
CD9-211ENST00000546073 BBOX1O75936 387 aa22.06■■□□□ 1.12
CD9-211ENST00000546073 MS4A1P11836 297 aa22.06■■□□□ 1.12
CD9-211ENST00000546073 CC2D2BQ6DHV5 1058 aa22.06■■□□□ 1.12
CD9-211ENST00000546073 KIF13BQ9NQT8 1826 aa22.06■■□□□ 1.12
CD9-211ENST00000546073 C21orf2O43822 256 aa22.05■■□□□ 1.12
CD9-211ENST00000546073 HOXA10P31260 410 aaPredicted RBP22.05■■□□□ 1.12
CD9-211ENST00000546073 SF3B3Q15393 1217 aaKnown RBP22.05■■□□□ 1.12
CD9-211ENST00000546073 ZKSCAN2Q63HK3 967 aa22.05■■□□□ 1.12
CD9-211ENST00000546073 TMC4Q7Z404 712 aa22.05■■□□□ 1.12
CD9-211ENST00000546073 SYNE4Q8N205 404 aa22.05■■□□□ 1.12
CD9-211ENST00000546073 ARFGEF2Q9Y6D5 1785 aa22.04■■□□□ 1.12
CD9-211ENST00000546073 H7C1W4 665 aa22.04■■□□□ 1.12
CD9-211ENST00000546073 GRM8O00222 908 aa22.04■■□□□ 1.12
CD9-211ENST00000546073 CCDC93Q567U6 631 aa22.04■■□□□ 1.12
CD9-211ENST00000546073 FTSJ3Q8IY81 847 aaKnown RBP22.04■■□□□ 1.12
CD9-211ENST00000546073 RTKN2Q8IZC4 609 aa22.04■■□□□ 1.12
CD9-211ENST00000546073 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.04■■□□□ 1.12
CD9-211ENST00000546073 ANKRD36CQ5JPF3 1778 aa22.03■■□□□ 1.12
CD9-211ENST00000546073 PPEF1O14829 653 aaPredicted RBP22.03■■□□□ 1.12
CD9-211ENST00000546073 JARID2Q92833 1246 aaPredicted RBP22.03■■□□□ 1.12
CD9-211ENST00000546073 CDC5LQ99459 802 aaKnown RBP22.03■■□□□ 1.12
CD9-211ENST00000546073 BCAR3O75815 825 aa22.02■■□□□ 1.12
CD9-211ENST00000546073 GRAPQ13588 217 aa22.02■■□□□ 1.12
CD9-211ENST00000546073 ATF7IPQ6VMQ6 1270 aa22.02■■□□□ 1.12
CD9-211ENST00000546073 GRAPLQ8TC17 118 aaPredicted RBP22.02■■□□□ 1.12
CD9-211ENST00000546073 CHMP3Q9Y3E7 222 aa22.02■■□□□ 1.12
CD9-211ENST00000546073 CTSWP56202 376 aa22.01■■□□□ 1.11
CD9-211ENST00000546073 RCAN3Q9UKA8 241 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms