RNA–Protein interactions for RNA: ENST00000545367.5

NPIPB4-221, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-221ENST00000545367 CAPNS2Q96L46 248 aa11.71□□□□□ -0.53
NPIPB4-221ENST00000545367 BEGAINQ9BUH8 593 aa11.71□□□□□ -0.53
NPIPB4-221ENST00000545367 LGR6Q9HBX8 967 aa11.71□□□□□ -0.53
NPIPB4-221ENST00000545367 A0A087WZG4 1122 aa11.7□□□□□ -0.54
NPIPB4-221ENST00000545367 RNMTO43148 476 aaKnown RBP11.7□□□□□ -0.54
NPIPB4-221ENST00000545367 ECM2O94769 699 aaPredicted RBP11.7□□□□□ -0.54
NPIPB4-221ENST00000545367 SRGNP10124 158 aa11.7□□□□□ -0.54
NPIPB4-221ENST00000545367 RGS19P49795 217 aa11.7□□□□□ -0.54
NPIPB4-221ENST00000545367 FKBP4Q02790 459 aaKnown RBP eCLIP11.7□□□□□ -0.54
NPIPB4-221ENST00000545367 CYP4F22Q6NT55 531 aa11.7□□□□□ -0.54
NPIPB4-221ENST00000545367 OLFM4Q6UX06 510 aa11.7□□□□□ -0.54
NPIPB4-221ENST00000545367 TBC1D2BQ9UPU7 963 aa11.7□□□□□ -0.54
NPIPB4-221ENST00000545367 FMR1Q06787 632 aaKnown RBP eCLIP11.69□□□□□ -0.54
NPIPB4-221ENST00000545367 IFNL1Q8IU54 200 aa11.69□□□□□ -0.54
NPIPB4-221ENST00000545367 MASTLQ96GX5 879 aa11.69□□□□□ -0.54
NPIPB4-221ENST00000545367 HEG1Q9ULI3 1381 aa11.68□□□□□ -0.54
NPIPB4-221ENST00000545367 STARD3NLO95772 234 aa11.68□□□□□ -0.54
NPIPB4-221ENST00000545367 ECE1P42892 770 aa11.68□□□□□ -0.54
NPIPB4-221ENST00000545367 PNMA8AQ86V59 439 aaPredicted RBP11.68□□□□□ -0.54
NPIPB4-221ENST00000545367 TTC5Q8N0Z6 440 aa11.68□□□□□ -0.54
NPIPB4-221ENST00000545367 MCOLN1Q9GZU1 580 aa11.68□□□□□ -0.54
NPIPB4-221ENST00000545367 DDX21Q9NR30 783 aaKnown RBP eCLIP11.68□□□□□ -0.54
NPIPB4-221ENST00000545367 SNED1Q8TER0 1413 aa11.68□□□□□ -0.54
NPIPB4-221ENST00000545367 AKAP11Q9UKA4 1901 aa11.67□□□□□ -0.54
NPIPB4-221ENST00000545367 AOC2O75106 756 aa11.67□□□□□ -0.54
NPIPB4-221ENST00000545367 HMOX1P09601 288 aa11.67□□□□□ -0.54
NPIPB4-221ENST00000545367 TIE1P35590 1138 aa11.67□□□□□ -0.54
NPIPB4-221ENST00000545367 IARSP41252 1262 aaKnown RBP11.67□□□□□ -0.54
NPIPB4-221ENST00000545367 SETDB2Q96T68 719 aa11.67□□□□□ -0.54
NPIPB4-221ENST00000545367 NUP98P52948 1817 aa11.67□□□□□ -0.54
NPIPB4-221ENST00000545367 TRAF5O00463 557 aa11.66□□□□□ -0.54
NPIPB4-221ENST00000545367 CAMTA2O94983 1202 aa11.66□□□□□ -0.54
NPIPB4-221ENST00000545367 IL13P35225 146 aa11.66□□□□□ -0.54
NPIPB4-221ENST00000545367 ZNF496Q96IT1 587 aaPredicted RBP11.66□□□□□ -0.54
NPIPB4-221ENST00000545367 GPR101Q96P66 508 aaPredicted RBP11.66□□□□□ -0.54
NPIPB4-221ENST00000545367 GJA3Q9Y6H8 435 aa11.66□□□□□ -0.54
NPIPB4-221ENST00000545367 LMOD1P29536 600 aaPredicted RBP11.65□□□□□ -0.54
NPIPB4-221ENST00000545367 MORC1Q86VD1 984 aa11.65□□□□□ -0.54
NPIPB4-221ENST00000545367 NBPF5PQ86XG9 351 aaPredicted RBP11.65□□□□□ -0.54
NPIPB4-221ENST00000545367 GPC2Q8N158 579 aa11.65□□□□□ -0.54
NPIPB4-221ENST00000545367 SPRYD3Q8NCJ5 442 aa11.65□□□□□ -0.54
NPIPB4-221ENST00000545367 C7orf43Q8WVR3 580 aa11.65□□□□□ -0.54
NPIPB4-221ENST00000545367 NPR1P16066 1061 aa11.64□□□□□ -0.55
NPIPB4-221ENST00000545367 IL6STP40189 918 aaPredicted RBP11.64□□□□□ -0.55
NPIPB4-221ENST00000545367 PIP4K2AP48426 406 aaPredicted RBP11.64□□□□□ -0.55
NPIPB4-221ENST00000545367 DGKZQ13574 1117 aa11.64□□□□□ -0.55
NPIPB4-221ENST00000545367 MTHFSDQ2M296 383 aaKnown RBP11.64□□□□□ -0.55
NPIPB4-221ENST00000545367 DCBLD2Q96PD2 775 aa11.64□□□□□ -0.55
NPIPB4-221ENST00000545367 ABCC12Q96J65 1359 aa11.64□□□□□ -0.55
NPIPB4-221ENST00000545367 LAMB2P55268 1798 aa11.64□□□□□ -0.55
NPIPB4-221ENST00000545367 FZD9O00144 591 aa11.63□□□□□ -0.55
NPIPB4-221ENST00000545367 A1BGP04217 495 aa11.63□□□□□ -0.55
NPIPB4-221ENST00000545367 SCNN1DP51172 638 aa11.63□□□□□ -0.55
NPIPB4-221ENST00000545367 SOX10P56693 466 aa11.63□□□□□ -0.55
NPIPB4-221ENST00000545367 NPM2Q86SE8 214 aaKnown RBP11.63□□□□□ -0.55
NPIPB4-221ENST00000545367 DZIP3Q86Y13 1208 aaKnown RBP11.63□□□□□ -0.55
NPIPB4-221ENST00000545367 TLL2Q9Y6L7 1015 aa11.63□□□□□ -0.55
NPIPB4-221ENST00000545367 FAM177BA6PVY3 158 aa11.62□□□□□ -0.55
NPIPB4-221ENST00000545367 RIOK3O14730 519 aaKnown RBP11.62□□□□□ -0.55
NPIPB4-221ENST00000545367 EIF6P56537 245 aaKnown RBP11.62□□□□□ -0.55
NPIPB4-221ENST00000545367 ASTLQ6HA08 431 aaPredicted RBP11.62□□□□□ -0.55
NPIPB4-221ENST00000545367 RTKN2Q8IZC4 609 aa11.62□□□□□ -0.55
NPIPB4-221ENST00000545367 SYNE4Q8N205 404 aa11.62□□□□□ -0.55
NPIPB4-221ENST00000545367 PANK3Q9H999 370 aa11.62□□□□□ -0.55
NPIPB4-221ENST00000545367 COL3A1P02461 1466 aaPredicted RBP11.62□□□□□ -0.55
NPIPB4-221ENST00000545367 CA12O43570 354 aa11.61□□□□□ -0.55
NPIPB4-221ENST00000545367 EPS15P42566 896 aa11.61□□□□□ -0.55
NPIPB4-221ENST00000545367 CST9Q5W186 159 aa11.61□□□□□ -0.55
NPIPB4-221ENST00000545367 ZNF790Q6PG37 636 aa11.61□□□□□ -0.55
NPIPB4-221ENST00000545367 SLC51AQ86UW1 340 aa11.61□□□□□ -0.55
NPIPB4-221ENST00000545367 JDP2Q8WYK2 163 aa11.61□□□□□ -0.55
NPIPB4-221ENST00000545367 PCDHB8Q9UN66 801 aa11.61□□□□□ -0.55
NPIPB4-221ENST00000545367 ANKRD36CQ5JPF3 1778 aa11.6□□□□□ -0.55
NPIPB4-221ENST00000545367 BRPF1P55201 1214 aaPredicted RBP11.6□□□□□ -0.55
NPIPB4-221ENST00000545367 TEFQ10587 303 aa11.6□□□□□ -0.55
NPIPB4-221ENST00000545367 PDAP1Q13442 181 aaKnown RBP11.6□□□□□ -0.55
NPIPB4-221ENST00000545367 CIAPIN1Q6FI81 312 aa11.6□□□□□ -0.55
NPIPB4-221ENST00000545367 RNF25Q96BH1 459 aaPredicted RBP11.6□□□□□ -0.55
NPIPB4-221ENST00000545367 FMNL2Q96PY5 1086 aa11.6□□□□□ -0.55
NPIPB4-221ENST00000545367 ZNF408Q9H9D4 720 aa11.6□□□□□ -0.55
NPIPB4-221ENST00000545367 TSHZ2Q9NRE2 1034 aa11.6□□□□□ -0.55
NPIPB4-221ENST00000545367 ZNF652Q9Y2D9 606 aa11.6□□□□□ -0.55
NPIPB4-221ENST00000545367 DDX60Q8IY21 1712 aaKnown RBP11.6□□□□□ -0.55
NPIPB4-221ENST00000545367 RIC1Q4ADV7 1423 aa11.6□□□□□ -0.55
NPIPB4-221ENST00000545367 KDM3BQ7LBC6 1761 aa11.59□□□□□ -0.55
NPIPB4-221ENST00000545367 CELF2O95319 508 aaKnown RBP11.59□□□□□ -0.55
NPIPB4-221ENST00000545367 MAP2K2P36507 400 aa11.59□□□□□ -0.55
NPIPB4-221ENST00000545367 PSMD1Q99460 953 aa11.59□□□□□ -0.55
NPIPB4-221ENST00000545367 POLR2AP24928 1970 aaKnown RBP11.58□□□□□ -0.56
NPIPB4-221ENST00000545367 RGL2O15211 777 aa11.58□□□□□ -0.56
NPIPB4-221ENST00000545367 SAPCD2Q86UD0 394 aa11.58□□□□□ -0.56
NPIPB4-221ENST00000545367 LARGE2Q8N3Y3 721 aa11.58□□□□□ -0.56
NPIPB4-221ENST00000545367 TEX13AQ9BXU3 409 aaPredicted RBP11.58□□□□□ -0.56
NPIPB4-221ENST00000545367 GLIS2Q9BZE0 524 aaPredicted RBP11.58□□□□□ -0.56
NPIPB4-221ENST00000545367 BMP2KQ9NSY1 1161 aaPredicted RBP11.58□□□□□ -0.56
NPIPB4-221ENST00000545367 NIP7Q9Y221 180 aaKnown RBP eCLIP11.58□□□□□ -0.56
NPIPB4-221ENST00000545367 KLRG2A4D1S0 409 aaPredicted RBP11.57□□□□□ -0.56
NPIPB4-221ENST00000545367 ATMINO43313 823 aaPredicted RBP11.57□□□□□ -0.56
NPIPB4-221ENST00000545367 PRPF38BQ5VTL8 546 aaKnown RBP11.57□□□□□ -0.56
NPIPB4-221ENST00000545367 USP50Q70EL3 339 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms