RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 TSC1Q92574 1164 aa10.28□□□□□ -0.76
CCDC7-210ENST00000545067 IL25Q9H293 177 aa10.28□□□□□ -0.76
CCDC7-210ENST00000545067 SH2B1Q9NRF2 756 aaPredicted RBP10.28□□□□□ -0.76
CCDC7-210ENST00000545067 ZKSCAN5Q9Y2L8 839 aa10.28□□□□□ -0.76
CCDC7-210ENST00000545067 LMTK2Q8IWU2 1503 aa10.28□□□□□ -0.76
CCDC7-210ENST00000545067 TULP1O00294 542 aaPredicted RBP10.27□□□□□ -0.76
CCDC7-210ENST00000545067 IFIT1P09914 478 aaKnown RBP10.27□□□□□ -0.76
CCDC7-210ENST00000545067 GTF2E1P29083 439 aaPredicted RBP10.27□□□□□ -0.76
CCDC7-210ENST00000545067 RAD50Q92878 1312 aa10.27□□□□□ -0.77
CCDC7-210ENST00000545067 STK38Q15208 465 aa10.27□□□□□ -0.77
CCDC7-210ENST00000545067 TPD52L1Q16890 204 aaPredicted RBP10.27□□□□□ -0.77
CCDC7-210ENST00000545067 ISM2Q6H9L7 571 aa10.27□□□□□ -0.77
CCDC7-210ENST00000545067 RUFY3Q7L099 469 aa10.27□□□□□ -0.77
CCDC7-210ENST00000545067 INTS4Q96HW7 963 aaKnown RBP10.27□□□□□ -0.77
CCDC7-210ENST00000545067 PRDM10Q9NQV6 1147 aa10.27□□□□□ -0.77
CCDC7-210ENST00000545067 CNNM1Q9NRU3 951 aa10.27□□□□□ -0.77
CCDC7-210ENST00000545067 IDH1O75874 414 aaKnown RBP10.27□□□□□ -0.77
CCDC7-210ENST00000545067 NEK1Q96PY6 1258 aa10.27□□□□□ -0.77
CCDC7-210ENST00000545067 SEC62Q99442 399 aaKnown RBP10.27□□□□□ -0.77
CCDC7-210ENST00000545067 NLRP1Q9C000 1473 aa10.27□□□□□ -0.77
CCDC7-210ENST00000545067 LARGE1O95461 756 aa10.26□□□□□ -0.77
CCDC7-210ENST00000545067 ZNF496Q96IT1 587 aaPredicted RBP10.26□□□□□ -0.77
CCDC7-210ENST00000545067 DBNDD2Q9BQY9 259 aa10.26□□□□□ -0.77
CCDC7-210ENST00000545067 USP16Q9Y5T5 823 aa10.26□□□□□ -0.77
CCDC7-210ENST00000545067 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.26□□□□□ -0.77
CCDC7-210ENST00000545067 CCDC171Q6TFL3 1326 aa10.26□□□□□ -0.77
CCDC7-210ENST00000545067 ARHGEF10O15013 1369 aa10.26□□□□□ -0.77
CCDC7-210ENST00000545067 CD163L1Q9NR16 1453 aa10.26□□□□□ -0.77
CCDC7-210ENST00000545067 MROH1Q8NDA8 1641 aa10.26□□□□□ -0.77
CCDC7-210ENST00000545067 POLR3DP05423 398 aaPredicted RBP10.26□□□□□ -0.77
CCDC7-210ENST00000545067 Q6ZUG5 572 aa10.26□□□□□ -0.77
CCDC7-210ENST00000545067 VWDEQ8N2E2 1590 aa10.26□□□□□ -0.77
CCDC7-210ENST00000545067 BIN1O00499 593 aa10.26□□□□□ -0.77
CCDC7-210ENST00000545067 GIGYF1O75420 1035 aaPredicted RBP10.26□□□□□ -0.77
CCDC7-210ENST00000545067 ALDH1L1O75891 902 aa10.26□□□□□ -0.77
CCDC7-210ENST00000545067 CCDC158Q5M9N0 1113 aa10.26□□□□□ -0.77
CCDC7-210ENST00000545067 CCDC144CPQ8IYA2 1237 aa10.26□□□□□ -0.77
CCDC7-210ENST00000545067 IFNL2Q8IZJ0 200 aa10.26□□□□□ -0.77
CCDC7-210ENST00000545067 A0A0D9SFI3 127 aa10.25□□□□□ -0.77
CCDC7-210ENST00000545067 RRP9O43818 475 aaKnown RBP10.25□□□□□ -0.77
CCDC7-210ENST00000545067 SMC2O95347 1197 aa10.25□□□□□ -0.77
CCDC7-210ENST00000545067 ME3Q16798 604 aa10.25□□□□□ -0.77
CCDC7-210ENST00000545067 ZNF790Q6PG37 636 aa10.25□□□□□ -0.77
CCDC7-210ENST00000545067 LUZP1Q86V48 1076 aa10.25□□□□□ -0.77
CCDC7-210ENST00000545067 ZNF594Q96JF6 807 aaPredicted RBP10.25□□□□□ -0.77
CCDC7-210ENST00000545067 OSBPL3Q9H4L5 887 aa10.25□□□□□ -0.77
CCDC7-210ENST00000545067 MTMR7Q9Y216 660 aa10.25□□□□□ -0.77
CCDC7-210ENST00000545067 JAK2O60674 1132 aa10.25□□□□□ -0.77
CCDC7-210ENST00000545067 SNRPA1P09661 255 aaKnown RBP10.25□□□□□ -0.77
CCDC7-210ENST00000545067 C16orf45Q96MC5 204 aaPredicted RBP10.25□□□□□ -0.77
CCDC7-210ENST00000545067 DDX21Q9NR30 783 aaKnown RBP eCLIP10.25□□□□□ -0.77
CCDC7-210ENST00000545067 PIK3C2BO00750 1634 aa10.25□□□□□ -0.77
CCDC7-210ENST00000545067 MYO3AQ8NEV4 1616 aa10.25□□□□□ -0.77
CCDC7-210ENST00000545067 SIRT1Q96EB6 747 aa10.25□□□□□ -0.77
CCDC7-210ENST00000545067 KIF24Q5T7B8 1368 aa10.25□□□□□ -0.77
CCDC7-210ENST00000545067 CDC37L1Q7L3B6 337 aa10.24□□□□□ -0.77
CCDC7-210ENST00000545067 ERCC4Q92889 916 aaPredicted RBP10.24□□□□□ -0.77
CCDC7-210ENST00000545067 CPSF1Q10570 1443 aaKnown RBP10.24□□□□□ -0.77
CCDC7-210ENST00000545067 FRMPD1Q5SYB0 1578 aa10.24□□□□□ -0.77
CCDC7-210ENST00000545067 TTC41PQ6P2S7 1318 aa10.24□□□□□ -0.77
CCDC7-210ENST00000545067 CPLX2Q6PUV4 134 aaKnown RBP10.24□□□□□ -0.77
CCDC7-210ENST00000545067 HOMER1Q86YM7 354 aa10.24□□□□□ -0.77
CCDC7-210ENST00000545067 CCAR2Q8N163 923 aaKnown RBP10.24□□□□□ -0.77
CCDC7-210ENST00000545067 SCAND2PQ9GZW5 306 aaPredicted RBP10.24□□□□□ -0.77
CCDC7-210ENST00000545067 NCOA5Q9HCD5 579 aaKnown RBP10.24□□□□□ -0.77
CCDC7-210ENST00000545067 KIAA1210Q9ULL0 1709 aa10.24□□□□□ -0.77
CCDC7-210ENST00000545067 MED14O60244 1454 aa10.24□□□□□ -0.77
CCDC7-210ENST00000545067 SLC27A2O14975 620 aa10.24□□□□□ -0.77
CCDC7-210ENST00000545067 ZNF165P49910 485 aa10.24□□□□□ -0.77
CCDC7-210ENST00000545067 TPM4P67936 248 aa10.24□□□□□ -0.77
CCDC7-210ENST00000545067 APOBRQ0VD83 1088 aa10.24□□□□□ -0.77
CCDC7-210ENST00000545067 KRT32Q14532 448 aa10.24□□□□□ -0.77
CCDC7-210ENST00000545067 ANO6Q4KMQ2 910 aa10.24□□□□□ -0.77
CCDC7-210ENST00000545067 DNAJC25Q9H1X3 360 aa10.24□□□□□ -0.77
CCDC7-210ENST00000545067 DIP2CQ9Y2E4 1556 aa10.24□□□□□ -0.77
CCDC7-210ENST00000545067 OFD1O75665 1012 aa10.23□□□□□ -0.77
CCDC7-210ENST00000545067 TRIM29Q14134 588 aa10.23□□□□□ -0.77
CCDC7-210ENST00000545067 TRMT1Q9NXH9 659 aaKnown RBP10.23□□□□□ -0.77
CCDC7-210ENST00000545067 AK9Q5TCS8 1911 aa10.23□□□□□ -0.77
CCDC7-210ENST00000545067 A1BGP04217 495 aa10.23□□□□□ -0.77
CCDC7-210ENST00000545067 SLFNL1Q499Z3 407 aa10.23□□□□□ -0.77
CCDC7-210ENST00000545067 LSG1Q9H089 658 aaKnown RBP10.23□□□□□ -0.77
CCDC7-210ENST00000545067 TPCN1Q9ULQ1 816 aa10.23□□□□□ -0.77
CCDC7-210ENST00000545067 LRRFIP1Q32MZ4 808 aaKnown RBP10.23□□□□□ -0.77
CCDC7-210ENST00000545067 METTL24Q5JXM2 366 aa10.23□□□□□ -0.77
CCDC7-210ENST00000545067 VPS53Q5VIR6 699 aa10.23□□□□□ -0.77
CCDC7-210ENST00000545067 STAP2Q9UGK3 403 aa10.23□□□□□ -0.77
CCDC7-210ENST00000545067 DEPDC5O75140 1603 aa10.23□□□□□ -0.77
CCDC7-210ENST00000545067 COL3A1P02461 1466 aaPredicted RBP10.23□□□□□ -0.77
CCDC7-210ENST00000545067 ZC3H13Q5T200 1668 aaKnown RBP10.23□□□□□ -0.77
CCDC7-210ENST00000545067 NOLC1Q14978 699 aaKnown RBP eCLIP10.23□□□□□ -0.77
CCDC7-210ENST00000545067 OTUD7BQ6GQQ9 843 aa10.23□□□□□ -0.77
CCDC7-210ENST00000545067 CCDC186Q7Z3E2 898 aa10.23□□□□□ -0.77
CCDC7-210ENST00000545067 FAM177A1Q8N128 213 aaPredicted RBP10.23□□□□□ -0.77
CCDC7-210ENST00000545067 PI4K2BQ8TCG2 481 aa10.23□□□□□ -0.77
CCDC7-210ENST00000545067 CFAP45Q9UL16 551 aa10.23□□□□□ -0.77
CCDC7-210ENST00000545067 NOL7Q9UMY1 257 aaKnown RBP10.23□□□□□ -0.77
CCDC7-210ENST00000545067 CFAP74Q9C0B2 1584 aa10.22□□□□□ -0.77
CCDC7-210ENST00000545067 ATP10DQ9P241 1426 aa10.22□□□□□ -0.77
CCDC7-210ENST00000545067 PES1O00541 588 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms