RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 SNRPA1P09661 255 aaKnown RBP9.67□□□□□ -0.86
CPSF7-224ENST00000544990 CANXP27824 592 aaKnown RBP9.67□□□□□ -0.86
CPSF7-224ENST00000544990 TMPOP42166 694 aaKnown RBP9.67□□□□□ -0.86
CPSF7-224ENST00000544990 HIC1Q14526 733 aa9.67□□□□□ -0.86
CPSF7-224ENST00000544990 DOK7Q18PE1 504 aa9.67□□□□□ -0.86
CPSF7-224ENST00000544990 CCDC146Q8IYE0 955 aa9.67□□□□□ -0.86
CPSF7-224ENST00000544990 C4AP0C0L4 1744 aa9.67□□□□□ -0.86
CPSF7-224ENST00000544990 SOS1Q07889 1333 aaPredicted RBP9.66□□□□□ -0.86
CPSF7-224ENST00000544990 MMP10P09238 476 aa9.66□□□□□ -0.86
CPSF7-224ENST00000544990 GYS1P13807 737 aa9.66□□□□□ -0.86
CPSF7-224ENST00000544990 ZBTB1Q9Y2K1 713 aa9.66□□□□□ -0.86
CPSF7-224ENST00000544990 CD2APQ9Y5K6 639 aa9.66□□□□□ -0.86
CPSF7-224ENST00000544990 COL15A1P39059 1388 aa9.65□□□□□ -0.86
CPSF7-224ENST00000544990 USP42Q9H9J4 1324 aaKnown RBP9.65□□□□□ -0.86
CPSF7-224ENST00000544990 IL6STP40189 918 aaPredicted RBP9.65□□□□□ -0.86
CPSF7-224ENST00000544990 THUMPD2Q9BTF0 503 aaKnown RBP9.65□□□□□ -0.86
CPSF7-224ENST00000544990 BABAM1Q9NWV8 329 aa9.65□□□□□ -0.86
CPSF7-224ENST00000544990 MIS18AQ9NYP9 233 aa9.65□□□□□ -0.86
CPSF7-224ENST00000544990 NARFQ9UHQ1 456 aa9.65□□□□□ -0.86
CPSF7-224ENST00000544990 GTF3C3Q9Y5Q9 886 aa9.65□□□□□ -0.86
CPSF7-224ENST00000544990 PARP3Q9Y6F1 533 aa9.65□□□□□ -0.86
CPSF7-224ENST00000544990 MAP3K7O43318 606 aa9.64□□□□□ -0.87
CPSF7-224ENST00000544990 A1BGP04217 495 aa9.64□□□□□ -0.87
CPSF7-224ENST00000544990 EIF5P55010 431 aaKnown RBP9.64□□□□□ -0.87
CPSF7-224ENST00000544990 MAP2K5Q13163 448 aa9.64□□□□□ -0.87
CPSF7-224ENST00000544990 GPR162Q16538 588 aa9.64□□□□□ -0.87
CPSF7-224ENST00000544990 USPL1Q5W0Q7 1092 aa9.64□□□□□ -0.87
CPSF7-224ENST00000544990 SLAIN1Q8ND83 568 aa9.64□□□□□ -0.87
CPSF7-224ENST00000544990 SRP68Q9UHB9 627 aaKnown RBP9.64□□□□□ -0.87
CPSF7-224ENST00000544990 RRP7AQ9Y3A4 280 aaKnown RBP9.64□□□□□ -0.87
CPSF7-224ENST00000544990 ZNF330Q9Y3S2 320 aaPredicted RBP9.64□□□□□ -0.87
CPSF7-224ENST00000544990 USP16Q9Y5T5 823 aa9.64□□□□□ -0.87
CPSF7-224ENST00000544990 KDM3BQ7LBC6 1761 aa9.64□□□□□ -0.87
CPSF7-224ENST00000544990 TRIM66O15016 1216 aa9.63□□□□□ -0.87
CPSF7-224ENST00000544990 EIF4A1P60842 406 aaKnown RBP9.63□□□□□ -0.87
CPSF7-224ENST00000544990 TYW1BQ6NUM6 668 aa9.63□□□□□ -0.87
CPSF7-224ENST00000544990 NLGN2Q8NFZ4 835 aa9.63□□□□□ -0.87
CPSF7-224ENST00000544990 FBXW7Q969H0 707 aa9.63□□□□□ -0.87
CPSF7-224ENST00000544990 MRS2Q9HD23 443 aa9.63□□□□□ -0.87
CPSF7-224ENST00000544990 TSPYL4Q9UJ04 414 aa9.63□□□□□ -0.87
CPSF7-224ENST00000544990 PRAMEF22A3QJZ6 481 aa9.62□□□□□ -0.87
CPSF7-224ENST00000544990 GPR37O15354 613 aa9.62□□□□□ -0.87
CPSF7-224ENST00000544990 GIGYF1O75420 1035 aaPredicted RBP9.62□□□□□ -0.87
CPSF7-224ENST00000544990 ERICH6Q7L0X2 663 aa9.62□□□□□ -0.87
CPSF7-224ENST00000544990 ZNF710Q8N1W2 664 aa9.62□□□□□ -0.87
CPSF7-224ENST00000544990 LAMB4A4D0S4 1761 aa9.61□□□□□ -0.87
CPSF7-224ENST00000544990 APAF1O14727 1248 aa9.61□□□□□ -0.87
CPSF7-224ENST00000544990 IRF6O14896 467 aa9.61□□□□□ -0.87
CPSF7-224ENST00000544990 TM4SF1P30408 202 aa9.61□□□□□ -0.87
CPSF7-224ENST00000544990 TGFB2P61812 414 aa9.61□□□□□ -0.87
CPSF7-224ENST00000544990 CALD1Q05682 793 aaKnown RBP9.61□□□□□ -0.87
CPSF7-224ENST00000544990 CCDC184Q52MB2 194 aa9.61□□□□□ -0.87
CPSF7-224ENST00000544990 DZIP3Q86Y13 1208 aaKnown RBP9.61□□□□□ -0.87
CPSF7-224ENST00000544990 TBC1D2BQ9UPU7 963 aa9.61□□□□□ -0.87
CPSF7-224ENST00000544990 LAS1LQ9Y4W2 734 aaKnown RBP9.61□□□□□ -0.87
CPSF7-224ENST00000544990 KIF13BQ9NQT8 1826 aa9.61□□□□□ -0.87
CPSF7-224ENST00000544990 GRIN3BO60391 1043 aa9.6□□□□□ -0.87
CPSF7-224ENST00000544990 PDE4DQ08499 809 aa9.6□□□□□ -0.87
CPSF7-224ENST00000544990 PTGDRQ13258 359 aa9.6□□□□□ -0.87
CPSF7-224ENST00000544990 ZSWIM6Q9HCJ5 1215 aa9.6□□□□□ -0.87
CPSF7-224ENST00000544990 CHD4Q14839 1912 aa9.6□□□□□ -0.87
CPSF7-224ENST00000544990 POLRMTO00411 1230 aaKnown RBP9.59□□□□□ -0.87
CPSF7-224ENST00000544990 CHL1O00533 1208 aa9.59□□□□□ -0.87
CPSF7-224ENST00000544990 SERPINB2P05120 415 aa9.59□□□□□ -0.87
CPSF7-224ENST00000544990 PIP4K2AP48426 406 aaPredicted RBP9.59□□□□□ -0.87
CPSF7-224ENST00000544990 DDR1Q08345 913 aa9.59□□□□□ -0.87
CPSF7-224ENST00000544990 NFIXQ14938 502 aa9.59□□□□□ -0.87
CPSF7-224ENST00000544990 CLEC4GQ6UXB4 293 aa9.59□□□□□ -0.87
CPSF7-224ENST00000544990 BICDL1Q6ZP65 573 aa9.59□□□□□ -0.87
CPSF7-224ENST00000544990 BCL2L12Q9HB09 334 aa9.59□□□□□ -0.87
CPSF7-224ENST00000544990 ZNF652Q9Y2D9 606 aa9.59□□□□□ -0.87
CPSF7-224ENST00000544990 PCDHGA10Q9Y5H3 936 aa9.59□□□□□ -0.87
CPSF7-224ENST00000544990 ERBB4Q15303 1308 aa9.58□□□□□ -0.88
CPSF7-224ENST00000544990 C10orf71Q711Q0 1435 aa9.58□□□□□ -0.88
CPSF7-224ENST00000544990 NBPF26B4DH59 902 aa9.58□□□□□ -0.88
CPSF7-224ENST00000544990 CAMTA2O94983 1202 aa9.58□□□□□ -0.88
CPSF7-224ENST00000544990 EIF2S2P20042 333 aaKnown RBP9.58□□□□□ -0.88
CPSF7-224ENST00000544990 YY1P25490 414 aa9.58□□□□□ -0.88
CPSF7-224ENST00000544990 NBPF10Q6P3W6 841 aaKnown RBP9.58□□□□□ -0.88
CPSF7-224ENST00000544990 NBPF15Q8N660 670 aa9.58□□□□□ -0.88
CPSF7-224ENST00000544990 CCDC102AQ96A19 550 aa9.58□□□□□ -0.88
CPSF7-224ENST00000544990 SETDB2Q96T68 719 aa9.58□□□□□ -0.88
CPSF7-224ENST00000544990 AFDNP55196 1824 aaKnown RBP9.58□□□□□ -0.88
CPSF7-224ENST00000544990 SCN7AQ01118 1682 aa9.58□□□□□ -0.88
CPSF7-224ENST00000544990 N4BP2Q86UW6 1770 aaPredicted RBP9.58□□□□□ -0.88
CPSF7-224ENST00000544990 A0A0G2JLW4 131 aa9.57□□□□□ -0.88
CPSF7-224ENST00000544990 SNPHO15079 494 aa9.57□□□□□ -0.88
CPSF7-224ENST00000544990 NPHP1O15259 732 aa9.57□□□□□ -0.88
CPSF7-224ENST00000544990 MYL6BP14649 208 aa9.57□□□□□ -0.88
CPSF7-224ENST00000544990 GNAI1P63096 354 aa9.57□□□□□ -0.88
CPSF7-224ENST00000544990 TBC1D9BQ66K14 1250 aa9.57□□□□□ -0.88
CPSF7-224ENST00000544990 NGEFQ8N5V2 710 aa9.57□□□□□ -0.88
CPSF7-224ENST00000544990 IFT57Q9NWB7 429 aa9.57□□□□□ -0.88
CPSF7-224ENST00000544990 BCORQ6W2J9 1755 aa9.57□□□□□ -0.88
CPSF7-224ENST00000544990 PXDNLA1KZ92 1463 aa9.56□□□□□ -0.88
CPSF7-224ENST00000544990 CARMIL3Q8ND23 1372 aa9.56□□□□□ -0.88
CPSF7-224ENST00000544990 DPEP1P16444 411 aa9.56□□□□□ -0.88
CPSF7-224ENST00000544990 YBX3P16989 372 aaKnown RBP eCLIP9.56□□□□□ -0.883e-7■■□□□ 12.8
CPSF7-224ENST00000544990 CCDC27Q2M243 656 aa9.56□□□□□ -0.88
CPSF7-224ENST00000544990 ARSIQ5FYB1 569 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms