RNA–Protein interactions for RNA: ENST00000544377.1

SLC3A2-221, Transcript of solute carrier family 3 member 2, humanhuman

TSL 4

Gene SLC3A2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-221ENST00000544377 PHAXQ9H814 394 aaKnown RBP21.5■■□□□ 1.03
SLC3A2-221ENST00000544377 TCIRG1Q13488 830 aa21.49■■□□□ 1.03
SLC3A2-221ENST00000544377 CCDC30Q5VVM6 783 aa21.49■■□□□ 1.03
SLC3A2-221ENST00000544377 DICER1Q9UPY3 1922 aaKnown RBP21.49■■□□□ 1.03
SLC3A2-221ENST00000544377 GOLGA2Q08379 1002 aa21.48■■□□□ 1.03
SLC3A2-221ENST00000544377 RIC3Q7Z5B4 369 aa21.48■■□□□ 1.03
SLC3A2-221ENST00000544377 NLRP10Q86W26 655 aa21.48■■□□□ 1.03
SLC3A2-221ENST00000544377 ATP5J2-PTCD1G3V325 749 aa21.47■■□□□ 1.03
SLC3A2-221ENST00000544377 NFKBIEO00221 500 aa21.47■■□□□ 1.03
SLC3A2-221ENST00000544377 LMNB1P20700 586 aa21.47■■□□□ 1.03
SLC3A2-221ENST00000544377 ALDH1B1P30837 517 aa21.47■■□□□ 1.03
SLC3A2-221ENST00000544377 TWISTNBQ3B726 338 aaPredicted RBP21.47■■□□□ 1.03
SLC3A2-221ENST00000544377 TRMT112Q9UI30 125 aaKnown RBP21.47■■□□□ 1.03
SLC3A2-221ENST00000544377 IL16Q14005 1332 aa21.47■■□□□ 1.03
SLC3A2-221ENST00000544377 KLRG2A4D1S0 409 aaPredicted RBP21.46■■□□□ 1.03
SLC3A2-221ENST00000544377 NLRP3Q96P20 1036 aa21.46■■□□□ 1.03
SLC3A2-221ENST00000544377 STK31Q9BXU1 1019 aa21.46■■□□□ 1.03
SLC3A2-221ENST00000544377 FANCIQ9NVI1 1328 aa21.46■■□□□ 1.03
SLC3A2-221ENST00000544377 PRELPP51888 382 aa21.45■■□□□ 1.02
SLC3A2-221ENST00000544377 NCBP3Q53F19 620 aaKnown RBP21.45■■□□□ 1.02
SLC3A2-221ENST00000544377 SOGA3Q5TF21 947 aa21.45■■□□□ 1.02
SLC3A2-221ENST00000544377 WDR63Q8IWG1 891 aa21.45■■□□□ 1.02
SLC3A2-221ENST00000544377 CHMP4AQ9BY43 222 aa21.45■■□□□ 1.02
SLC3A2-221ENST00000544377 TAOK3Q9H2K8 898 aa21.45■■□□□ 1.02
SLC3A2-221ENST00000544377 DDX60Q8IY21 1712 aaKnown RBP21.44■■□□□ 1.02
SLC3A2-221ENST00000544377 C1QTNF8P60827 252 aa21.44■■□□□ 1.02
SLC3A2-221ENST00000544377 CCDC93Q567U6 631 aa21.44■■□□□ 1.02
SLC3A2-221ENST00000544377 OLFM4Q6UX06 510 aa21.44■■□□□ 1.02
SLC3A2-221ENST00000544377 SYNE4Q8N205 404 aa21.44■■□□□ 1.02
SLC3A2-221ENST00000544377 RIC1Q4ADV7 1423 aa21.44■■□□□ 1.02
SLC3A2-221ENST00000544377 TAF1P21675 1872 aa21.43■■□□□ 1.02
SLC3A2-221ENST00000544377 HCLS1P14317 486 aaPredicted RBP21.43■■□□□ 1.02
SLC3A2-221ENST00000544377 CRY2Q49AN0 593 aa21.43■■□□□ 1.02
SLC3A2-221ENST00000544377 RTL5Q5HYW3 569 aaPredicted RBP21.43■■□□□ 1.02
SLC3A2-221ENST00000544377 C3orf67Q6ZVT6 689 aa21.43■■□□□ 1.02
SLC3A2-221ENST00000544377 RBM17Q96I25 401 aaKnown RBP21.43■■□□□ 1.02
SLC3A2-221ENST00000544377 MYD88Q99836 296 aa21.43■■□□□ 1.02
SLC3A2-221ENST00000544377 DDX58O95786 925 aaKnown RBP21.42■■□□□ 1.02
SLC3A2-221ENST00000544377 SH3TC1Q8TE82 1336 aa21.42■■□□□ 1.02
SLC3A2-221ENST00000544377 NMRK2Q9NPI5 230 aa21.42■■□□□ 1.02
SLC3A2-221ENST00000544377 CACNA1FO60840 1977 aa21.41■■□□□ 1.02
SLC3A2-221ENST00000544377 RNF123Q5XPI4 1314 aa21.41■■□□□ 1.02
SLC3A2-221ENST00000544377 KDM2BQ8NHM5 1336 aa21.41■■□□□ 1.02
SLC3A2-221ENST00000544377 EXOSC9Q06265 439 aaKnown RBP21.41■■□□□ 1.02
SLC3A2-221ENST00000544377 ISCA1Q9BUE6 129 aa21.41■■□□□ 1.02
SLC3A2-221ENST00000544377 FAM89AQ96GI7 184 aa21.4■■□□□ 1.02
SLC3A2-221ENST00000544377 SLC10A5Q5PT55 438 aa21.39■■□□□ 1.01
SLC3A2-221ENST00000544377 C7orf43Q8WVR3 580 aa21.39■■□□□ 1.01
SLC3A2-221ENST00000544377 MYH16Q9H6N6 1097 aa21.39■■□□□ 1.01
SLC3A2-221ENST00000544377 SPINK5Q9NQ38 1064 aaPredicted RBP21.39■■□□□ 1.01
SLC3A2-221ENST00000544377 LTBP3Q9NS15 1303 aa21.38■■□□□ 1.01
SLC3A2-221ENST00000544377 KIF3CO14782 793 aa21.38■■□□□ 1.01
SLC3A2-221ENST00000544377 PPEF1O14829 653 aaPredicted RBP21.38■■□□□ 1.01
SLC3A2-221ENST00000544377 SLC4A2P04920 1241 aa21.38■■□□□ 1.01
SLC3A2-221ENST00000544377 CRAMP1Q96RY5 1269 aa21.38■■□□□ 1.01
SLC3A2-221ENST00000544377 MAP3K2Q9Y2U5 619 aa21.38■■□□□ 1.01
SLC3A2-221ENST00000544377 HOXA10P31260 410 aaPredicted RBP21.37■■□□□ 1.01
SLC3A2-221ENST00000544377 FKBP4Q02790 459 aaKnown RBP eCLIP21.37■■□□□ 1.01
SLC3A2-221ENST00000544377 G2E3Q7L622 706 aa21.37■■□□□ 1.01
SLC3A2-221ENST00000544377 C16orf71Q8IYS4 520 aaPredicted RBP21.37■■□□□ 1.01
SLC3A2-221ENST00000544377 RTKN2Q8IZC4 609 aa21.37■■□□□ 1.01
SLC3A2-221ENST00000544377 RRAGCQ9HB90 399 aa21.37■■□□□ 1.01
SLC3A2-221ENST00000544377 ZNF277Q9NRM2 450 aaPredicted RBP21.37■■□□□ 1.01
SLC3A2-221ENST00000544377 ZC3H4Q9UPT8 1303 aaKnown RBP21.36■■□□□ 1.01
SLC3A2-221ENST00000544377 TMX4Q9H1E5 349 aaPredicted RBP21.36■■□□□ 1.01
SLC3A2-221ENST00000544377 ABCC4O15439 1325 aa21.35■■□□□ 1.01
SLC3A2-221ENST00000544377 PI4KAP2A4QPH2 592 aa21.35■■□□□ 1.01
SLC3A2-221ENST00000544377 DDX46Q7L014 1031 aaKnown RBP21.35■■□□□ 1.01
SLC3A2-221ENST00000544377 SLC51AQ86UW1 340 aa21.35■■□□□ 1.01
SLC3A2-221ENST00000544377 PI4KAP1Q8N8J0 262 aa21.35■■□□□ 1.01
SLC3A2-221ENST00000544377 JARID2Q92833 1246 aaPredicted RBP21.35■■□□□ 1.01
SLC3A2-221ENST00000544377 METTL22Q9BUU2 404 aaPredicted RBP21.35■■□□□ 1.01
SLC3A2-221ENST00000544377 IRS4O14654 1257 aaPredicted RBP21.34■■□□□ 1.01
SLC3A2-221ENST00000544377 VAMP4O75379 141 aa21.34■■□□□ 1.01
SLC3A2-221ENST00000544377 DPY19L2Q6NUT2 758 aa21.34■■□□□ 1.01
SLC3A2-221ENST00000544377 KSR2Q6VAB6 950 aa21.34■■□□□ 1.01
SLC3A2-221ENST00000544377 GLTPD2A6NH11 291 aa21.33■■□□□ 1.01
SLC3A2-221ENST00000544377 CCER2I3L3R5 266 aa21.33■■□□□ 1.01
SLC3A2-221ENST00000544377 NEXNQ0ZGT2 675 aa21.33■■□□□ 1.01
SLC3A2-221ENST00000544377 CWC25Q9NXE8 425 aaPredicted RBP21.33■■□□□ 1.01
SLC3A2-221ENST00000544377 MYH3P11055 1940 aa21.32■■□□□ 1
SLC3A2-221ENST00000544377 TRIM28Q13263 835 aaKnown RBP21.32■■□□□ 1
SLC3A2-221ENST00000544377 FKBP5Q13451 457 aaPredicted RBP21.32■■□□□ 1
SLC3A2-221ENST00000544377 CC2D2BQ6DHV5 1058 aa21.32■■□□□ 1
SLC3A2-221ENST00000544377 ZBTB38Q8NAP3 1195 aaPredicted RBP21.32■■□□□ 1
SLC3A2-221ENST00000544377 CCDC191Q8NCU4 936 aa21.32■■□□□ 1
SLC3A2-221ENST00000544377 IARSP41252 1262 aaKnown RBP21.31■■□□□ 1
SLC3A2-221ENST00000544377 FLIIQ13045 1269 aa21.31■■□□□ 1
SLC3A2-221ENST00000544377 GRAPQ13588 217 aa21.3■■□□□ 1
SLC3A2-221ENST00000544377 DIEXFQ68CQ4 756 aaKnown RBP21.3■■□□□ 1
SLC3A2-221ENST00000544377 GRAPLQ8TC17 118 aaPredicted RBP21.3■■□□□ 1
SLC3A2-221ENST00000544377 SPEF2Q9C093 1822 aa21.29■■□□□ 1
SLC3A2-221ENST00000544377 TOMM70O94826 608 aa21.29■■□□□ 1
SLC3A2-221ENST00000544377 DDNO94850 711 aaPredicted RBP21.29■■□□□ 1
SLC3A2-221ENST00000544377 CWF19L2Q2TBE0 894 aaKnown RBP21.29■■□□□ 1
SLC3A2-221ENST00000544377 ATP6V0A2Q9Y487 856 aa21.29■■□□□ 1
SLC3A2-221ENST00000544377 WDR90Q96KV7 1748 aa21.29■■□□□ 1
SLC3A2-221ENST00000544377 ZNF521Q96K83 1311 aa21.29■■□□□ 1
SLC3A2-221ENST00000544377 BBOX1O75936 387 aa21.28■■□□□ 1
SLC3A2-221ENST00000544377 PCCAP05165 728 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 1264 ms