RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 NUTM1Q86Y26 1132 aa12.76□□□□□ -0.37
C2CD3-220ENST00000544293 MIS18AQ9NYP9 233 aa12.76□□□□□ -0.37
C2CD3-220ENST00000544293 ABCC12Q96J65 1359 aa12.76□□□□□ -0.37
C2CD3-220ENST00000544293 DICER1Q9UPY3 1922 aaKnown RBP12.76□□□□□ -0.37
C2CD3-220ENST00000544293 NPC1L1Q9UHC9 1359 aa12.75□□□□□ -0.37
C2CD3-220ENST00000544293 CNGB1Q14028 1251 aaPredicted RBP12.74□□□□□ -0.37
C2CD3-220ENST00000544293 NPM2Q86SE8 214 aaKnown RBP12.74□□□□□ -0.37
C2CD3-220ENST00000544293 CAPNS2Q96L46 248 aa12.74□□□□□ -0.37
C2CD3-220ENST00000544293 GPR101Q96P66 508 aaPredicted RBP12.74□□□□□ -0.37
C2CD3-220ENST00000544293 ABT1Q9ULW3 272 aaKnown RBP12.74□□□□□ -0.37
C2CD3-220ENST00000544293 ZNF652Q9Y2D9 606 aa12.74□□□□□ -0.37
C2CD3-220ENST00000544293 UBN2Q6ZU65 1347 aa12.73□□□□□ -0.37
C2CD3-220ENST00000544293 AOC2O75106 756 aa12.73□□□□□ -0.37
C2CD3-220ENST00000544293 TTLL7Q6ZT98 887 aa12.73□□□□□ -0.37
C2CD3-220ENST00000544293 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
C2CD3-220ENST00000544293 GJA3Q9Y6H8 435 aa12.73□□□□□ -0.37
C2CD3-220ENST00000544293 TLL2Q9Y6L7 1015 aa12.73□□□□□ -0.37
C2CD3-220ENST00000544293 LTBP1Q14766 1721 aa12.73□□□□□ -0.37
C2CD3-220ENST00000544293 SUSD4Q5VX71 490 aa12.72□□□□□ -0.37
C2CD3-220ENST00000544293 JDP2Q8WYK2 163 aa12.72□□□□□ -0.37
C2CD3-220ENST00000544293 SCN4AP35499 1836 aa12.72□□□□□ -0.37
C2CD3-220ENST00000544293 CCDC85CA6NKD9 419 aa12.71□□□□□ -0.37
C2CD3-220ENST00000544293 ERVV-1B6SEH8 477 aa12.71□□□□□ -0.37
C2CD3-220ENST00000544293 HIRAP54198 1017 aaPredicted RBP12.71□□□□□ -0.37
C2CD3-220ENST00000544293 EIF6P56537 245 aaKnown RBP12.71□□□□□ -0.37
C2CD3-220ENST00000544293 CC2D2BQ6DHV5 1058 aa12.71□□□□□ -0.37
C2CD3-220ENST00000544293 USP50Q70EL3 339 aaPredicted RBP12.71□□□□□ -0.37
C2CD3-220ENST00000544293 ZNF34Q8IZ26 560 aa12.71□□□□□ -0.37
C2CD3-220ENST00000544293 NGEFQ8N5V2 710 aa12.71□□□□□ -0.37
C2CD3-220ENST00000544293 ZIC5Q96T25 663 aa12.71□□□□□ -0.37
C2CD3-220ENST00000544293 PGAP2Q9UHJ9 254 aa12.71□□□□□ -0.37
C2CD3-220ENST00000544293 SIPA1L3O60292 1781 aaPredicted RBP12.71□□□□□ -0.38
C2CD3-220ENST00000544293 VIRMAQ69YN4 1812 aaKnown RBP12.7□□□□□ -0.38
C2CD3-220ENST00000544293 HTATSF1O43719 755 aaKnown RBP12.7□□□□□ -0.38
C2CD3-220ENST00000544293 CXCL9Q07325 125 aa12.7□□□□□ -0.38
C2CD3-220ENST00000544293 TAF7Q15545 349 aaPredicted RBP12.7□□□□□ -0.38
C2CD3-220ENST00000544293 LRP10Q7Z4F1 713 aa12.7□□□□□ -0.38
C2CD3-220ENST00000544293 SAPCD2Q86UD0 394 aa12.7□□□□□ -0.38
C2CD3-220ENST00000544293 LARGE2Q8N3Y3 721 aa12.7□□□□□ -0.38
C2CD3-220ENST00000544293 CRAMP1Q96RY5 1269 aa12.7□□□□□ -0.38
C2CD3-220ENST00000544293 MAP3K15Q6ZN16 1313 aa12.69□□□□□ -0.38
C2CD3-220ENST00000544293 TCERG1O14776 1098 aaKnown RBP12.69□□□□□ -0.38
C2CD3-220ENST00000544293 NTSR2O95665 410 aa12.69□□□□□ -0.38
C2CD3-220ENST00000544293 GPTP24298 496 aa12.69□□□□□ -0.38
C2CD3-220ENST00000544293 GTF2E1P29083 439 aaPredicted RBP12.69□□□□□ -0.38
C2CD3-220ENST00000544293 MAP2K2P36507 400 aa12.69□□□□□ -0.38
C2CD3-220ENST00000544293 DLK2Q6UY11 383 aa12.69□□□□□ -0.38
C2CD3-220ENST00000544293 GPRC5DQ9NZD1 345 aa12.69□□□□□ -0.38
C2CD3-220ENST00000544293 CACNA1SQ13698 1873 aa12.69□□□□□ -0.38
C2CD3-220ENST00000544293 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
C2CD3-220ENST00000544293 U2AF1L5P0DN76 240 aaPredicted RBP12.68□□□□□ -0.38
C2CD3-220ENST00000544293 ECE1P42892 770 aa12.68□□□□□ -0.38
C2CD3-220ENST00000544293 EIF4A1P60842 406 aaKnown RBP12.68□□□□□ -0.38
C2CD3-220ENST00000544293 U2AF1Q01081 240 aaKnown RBP eCLIP12.68□□□□□ -0.38
C2CD3-220ENST00000544293 MLLT1Q03111 559 aaPredicted RBP12.68□□□□□ -0.38
C2CD3-220ENST00000544293 GRM1Q13255 1194 aa12.68□□□□□ -0.38
C2CD3-220ENST00000544293 SLC10A5Q5PT55 438 aa12.68□□□□□ -0.38
C2CD3-220ENST00000544293 RTF1Q92541 710 aaKnown RBP12.68□□□□□ -0.38
C2CD3-220ENST00000544293 GLIS2Q9BZE0 524 aaPredicted RBP12.68□□□□□ -0.38
C2CD3-220ENST00000544293 MCOLN1Q9GZU1 580 aa12.68□□□□□ -0.38
C2CD3-220ENST00000544293 BCORQ6W2J9 1755 aa12.68□□□□□ -0.38
C2CD3-220ENST00000544293 ARFGEF2Q9Y6D5 1785 aa12.67□□□□□ -0.38
C2CD3-220ENST00000544293 SHTN1A0MZ66 631 aa12.67□□□□□ -0.38
C2CD3-220ENST00000544293 PPEF1O14829 653 aaPredicted RBP12.67□□□□□ -0.38
C2CD3-220ENST00000544293 LMOD1P29536 600 aaPredicted RBP12.67□□□□□ -0.38
C2CD3-220ENST00000544293 PPP2R1AP30153 589 aa12.67□□□□□ -0.38
C2CD3-220ENST00000544293 AOC3Q16853 763 aa12.67□□□□□ -0.38
C2CD3-220ENST00000544293 RTFDC1Q9BY42 306 aaPredicted RBP12.67□□□□□ -0.38
C2CD3-220ENST00000544293 NYXQ9GZU5 481 aa12.67□□□□□ -0.38
C2CD3-220ENST00000544293 RRP7AQ9Y3A4 280 aaKnown RBP12.67□□□□□ -0.38
C2CD3-220ENST00000544293 RIC1Q4ADV7 1423 aa12.67□□□□□ -0.38
C2CD3-220ENST00000544293 CELF2O95319 508 aaKnown RBP12.66□□□□□ -0.38
C2CD3-220ENST00000544293 PDIA6Q15084 440 aa12.66□□□□□ -0.38
C2CD3-220ENST00000544293 GRIPAP1Q4V328 841 aa12.66□□□□□ -0.38
C2CD3-220ENST00000544293 PAXIP1Q6ZW49 1069 aaPredicted RBP12.66□□□□□ -0.38
C2CD3-220ENST00000544293 RPGRQ92834 1020 aaKnown RBP12.66□□□□□ -0.38
C2CD3-220ENST00000544293 RBM17Q96I25 401 aaKnown RBP12.66□□□□□ -0.38
C2CD3-220ENST00000544293 ZBTB3Q9H5J0 574 aa12.66□□□□□ -0.38
C2CD3-220ENST00000544293 ADARB2Q9NS39 739 aaKnown RBP12.66□□□□□ -0.38
C2CD3-220ENST00000544293 ATP6V0A2Q9Y487 856 aa12.66□□□□□ -0.38
C2CD3-220ENST00000544293 YDJCA8MPS7 323 aa12.65□□□□□ -0.38
C2CD3-220ENST00000544293 PPIP5K2O43314 1243 aa12.65□□□□□ -0.38
C2CD3-220ENST00000544293 GMPSP49915 693 aaPredicted RBP12.65□□□□□ -0.38
C2CD3-220ENST00000544293 NIM1KQ8IY84 436 aa12.65□□□□□ -0.38
C2CD3-220ENST00000544293 TRPM4Q8TD43 1214 aa12.65□□□□□ -0.38
C2CD3-220ENST00000544293 HHIPL1Q96JK4 782 aa12.65□□□□□ -0.38
C2CD3-220ENST00000544293 PLEKHF1Q96S99 279 aa12.65□□□□□ -0.38
C2CD3-220ENST00000544293 THUMPD2Q9BTF0 503 aaKnown RBP12.65□□□□□ -0.38
C2CD3-220ENST00000544293 ZNRF3Q9ULT6 936 aa12.65□□□□□ -0.38
C2CD3-220ENST00000544293 IBTKQ9P2D0 1353 aaPredicted RBP12.65□□□□□ -0.38
C2CD3-220ENST00000544293 THSD7BQ9C0I4 1608 aa12.64□□□□□ -0.39
C2CD3-220ENST00000544293 MYL6BP14649 208 aa12.64□□□□□ -0.39
C2CD3-220ENST00000544293 GIGYF2Q6Y7W6 1299 aaKnown RBP12.64□□□□□ -0.39
C2CD3-220ENST00000544293 VPS33BQ9H267 617 aa12.64□□□□□ -0.39
C2CD3-220ENST00000544293 NUDCQ9Y266 331 aa12.64□□□□□ -0.39
C2CD3-220ENST00000544293 ABCC4O15439 1325 aa12.63□□□□□ -0.39
C2CD3-220ENST00000544293 BRPF1P55201 1214 aaPredicted RBP12.63□□□□□ -0.39
C2CD3-220ENST00000544293 PROSER3Q2NL68 480 aa12.63□□□□□ -0.39
C2CD3-220ENST00000544293 CIAPIN1Q6FI81 312 aa12.63□□□□□ -0.39
C2CD3-220ENST00000544293 BEGAINQ9BUH8 593 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms