RNA–Protein interactions for RNA: ENST00000544151.1

LDHB-210, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-210ENST00000544151 KIF3CO14782 793 aa20.31■□□□□ 0.84
LDHB-210ENST00000544151 PARP10Q53GL7 1025 aa20.31■□□□□ 0.84
LDHB-210ENST00000544151 HSP90AB3PQ58FF7 597 aa20.3■□□□□ 0.84
LDHB-210ENST00000544151 SOGA3Q5TF21 947 aa20.3■□□□□ 0.84
LDHB-210ENST00000544151 PPP1R42Q7Z4L9 355 aa20.3■□□□□ 0.84
LDHB-210ENST00000544151 TAOK3Q9H2K8 898 aa20.3■□□□□ 0.84
LDHB-210ENST00000544151 NMRK2Q9NPI5 230 aa20.3■□□□□ 0.84
LDHB-210ENST00000544151 DBF4Q9UBU7 674 aaPredicted RBP20.3■□□□□ 0.84
LDHB-210ENST00000544151 KDM2BQ8NHM5 1336 aa20.29■□□□□ 0.84
LDHB-210ENST00000544151 DDX60Q8IY21 1712 aaKnown RBP20.29■□□□□ 0.84
LDHB-210ENST00000544151 ELL2O00472 640 aaPredicted RBP20.28■□□□□ 0.84
LDHB-210ENST00000544151 SLC4A2P04920 1241 aa20.28■□□□□ 0.84
LDHB-210ENST00000544151 CRY2Q49AN0 593 aa20.28■□□□□ 0.84
LDHB-210ENST00000544151 CCDC93Q567U6 631 aa20.28■□□□□ 0.84
LDHB-210ENST00000544151 LTBP3Q9NS15 1303 aa20.27■□□□□ 0.84
LDHB-210ENST00000544151 RPGRQ92834 1020 aaKnown RBP20.27■□□□□ 0.84
LDHB-210ENST00000544151 UTP14AQ9BVJ6 771 aaKnown RBP20.27■□□□□ 0.84
LDHB-210ENST00000544151 ALDH1B1P30837 517 aa20.26■□□□□ 0.83
LDHB-210ENST00000544151 CCDC27Q2M243 656 aa20.26■□□□□ 0.83
LDHB-210ENST00000544151 TSR2Q969E8 191 aaKnown RBP20.26■□□□□ 0.83
LDHB-210ENST00000544151 HYPKQ9NX55 129 aa20.26■□□□□ 0.83
LDHB-210ENST00000544151 OLFM4Q6UX06 510 aa20.25■□□□□ 0.83
LDHB-210ENST00000544151 NLRP10Q86W26 655 aa20.25■□□□□ 0.83
LDHB-210ENST00000544151 WWC1Q8IX03 1113 aa20.25■□□□□ 0.83
LDHB-210ENST00000544151 C7orf43Q8WVR3 580 aa20.25■□□□□ 0.83
LDHB-210ENST00000544151 RNF123Q5XPI4 1314 aa20.25■□□□□ 0.83
LDHB-210ENST00000544151 WDR90Q96KV7 1748 aa20.24■□□□□ 0.83
LDHB-210ENST00000544151 TCIRG1Q13488 830 aa20.24■□□□□ 0.83
LDHB-210ENST00000544151 C3orf67Q6ZVT6 689 aa20.24■□□□□ 0.83
LDHB-210ENST00000544151 PLBD2Q8NHP8 589 aa20.24■□□□□ 0.83
LDHB-210ENST00000544151 TAF1P21675 1872 aa20.23■□□□□ 0.83
LDHB-210ENST00000544151 ANKRD13DQ6ZTN6 518 aa20.23■□□□□ 0.83
LDHB-210ENST00000544151 C8orf58Q8NAV2 365 aa20.23■□□□□ 0.83
LDHB-210ENST00000544151 GLTPD2A6NH11 291 aa20.22■□□□□ 0.83
LDHB-210ENST00000544151 TOMM70O94826 608 aa20.22■□□□□ 0.83
LDHB-210ENST00000544151 C16orf71Q8IYS4 520 aaPredicted RBP20.22■□□□□ 0.83
LDHB-210ENST00000544151 ZNF428Q96B54 188 aa20.22■□□□□ 0.83
LDHB-210ENST00000544151 RBM17Q96I25 401 aaKnown RBP20.22■□□□□ 0.83
LDHB-210ENST00000544151 NLRP3Q96P20 1036 aa20.22■□□□□ 0.83
LDHB-210ENST00000544151 RRAGCQ9HB90 399 aa20.22■□□□□ 0.83
LDHB-210ENST00000544151 TRMT112Q9UI30 125 aaKnown RBP20.22■□□□□ 0.83
LDHB-210ENST00000544151 SNED1Q8TER0 1413 aa20.21■□□□□ 0.83
LDHB-210ENST00000544151 FKBP4Q02790 459 aaKnown RBP eCLIP20.21■□□□□ 0.83
LDHB-210ENST00000544151 GOLGA2Q08379 1002 aa20.21■□□□□ 0.83
LDHB-210ENST00000544151 FAM9BQ8IZU0 186 aa20.21■□□□□ 0.83
LDHB-210ENST00000544151 PHAXQ9H814 394 aaKnown RBP20.21■□□□□ 0.83
LDHB-210ENST00000544151 SALL2Q9Y467 1007 aaPredicted RBP20.21■□□□□ 0.83
LDHB-210ENST00000544151 SH3TC1Q8TE82 1336 aa20.21■□□□□ 0.83
LDHB-210ENST00000544151 PPEF1O14829 653 aaPredicted RBP20.2■□□□□ 0.82
LDHB-210ENST00000544151 HOXA10P31260 410 aaPredicted RBP20.2■□□□□ 0.82
LDHB-210ENST00000544151 RTKN2Q8IZC4 609 aa20.2■□□□□ 0.82
LDHB-210ENST00000544151 TSPYL6Q8N831 410 aa20.2■□□□□ 0.82
LDHB-210ENST00000544151 IL16Q14005 1332 aa20.2■□□□□ 0.82
LDHB-210ENST00000544151 CACNA1FO60840 1977 aa20.19■□□□□ 0.82
LDHB-210ENST00000544151 ATP5J2-PTCD1G3V325 749 aa20.19■□□□□ 0.82
LDHB-210ENST00000544151 HCLS1P14317 486 aaPredicted RBP20.19■□□□□ 0.82
LDHB-210ENST00000544151 CCDC30Q5VVM6 783 aa20.19■□□□□ 0.82
LDHB-210ENST00000544151 ZNF277Q9NRM2 450 aaPredicted RBP20.19■□□□□ 0.82
LDHB-210ENST00000544151 ABCC4O15439 1325 aa20.19■□□□□ 0.82
LDHB-210ENST00000544151 TCERG1O14776 1098 aaKnown RBP20.18■□□□□ 0.82
LDHB-210ENST00000544151 HSPA6P17066 643 aa20.18■□□□□ 0.82
LDHB-210ENST00000544151 SLC10A5Q5PT55 438 aa20.18■□□□□ 0.82
LDHB-210ENST00000544151 DPY19L2Q6NUT2 758 aa20.18■□□□□ 0.82
LDHB-210ENST00000544151 RIC3Q7Z5B4 369 aa20.18■□□□□ 0.82
LDHB-210ENST00000544151 SYNE4Q8N205 404 aa20.18■□□□□ 0.82
LDHB-210ENST00000544151 CRAMP1Q96RY5 1269 aa20.18■□□□□ 0.82
LDHB-210ENST00000544151 ISCA1Q9BUE6 129 aa20.18■□□□□ 0.82
LDHB-210ENST00000544151 FOXD4L1Q9NU39 408 aa20.18■□□□□ 0.82
LDHB-210ENST00000544151 LRRC37AA6NMS7 1700 aa20.17■□□□□ 0.82
LDHB-210ENST00000544151 SLC51AQ86UW1 340 aa20.17■□□□□ 0.82
LDHB-210ENST00000544151 RBM46Q8TBY0 533 aaKnown RBP20.17■□□□□ 0.82
LDHB-210ENST00000544151 CHMP4AQ9BY43 222 aa20.17■□□□□ 0.82
LDHB-210ENST00000544151 FANCIQ9NVI1 1328 aa20.17■□□□□ 0.82
LDHB-210ENST00000544151 TWISTNBQ3B726 338 aaPredicted RBP20.16■□□□□ 0.82
LDHB-210ENST00000544151 SCN4AP35499 1836 aa20.16■□□□□ 0.82
LDHB-210ENST00000544151 IARSP41252 1262 aaKnown RBP20.15■□□□□ 0.82
LDHB-210ENST00000544151 CC2D2BQ6DHV5 1058 aa20.15■□□□□ 0.82
LDHB-210ENST00000544151 PSMD1Q99460 953 aa20.15■□□□□ 0.82
LDHB-210ENST00000544151 MYD88Q99836 296 aa20.15■□□□□ 0.82
LDHB-210ENST00000544151 STK31Q9BXU1 1019 aa20.15■□□□□ 0.82
LDHB-210ENST00000544151 MYH3P11055 1940 aa20.15■□□□□ 0.82
LDHB-210ENST00000544151 COL4A5P29400 1685 aa20.14■□□□□ 0.81
LDHB-210ENST00000544151 DDX58O95786 925 aaKnown RBP20.14■□□□□ 0.81
LDHB-210ENST00000544151 VEGFAP15692 232 aaPredicted RBP20.14■□□□□ 0.81
LDHB-210ENST00000544151 RTL5Q5HYW3 569 aaPredicted RBP20.14■□□□□ 0.81
LDHB-210ENST00000544151 FAM89AQ96GI7 184 aa20.14■□□□□ 0.81
LDHB-210ENST00000544151 CEP350Q5VT06 3117 aa20.14■□□□□ 0.81
LDHB-210ENST00000544151 TMX4Q9H1E5 349 aaPredicted RBP20.13■□□□□ 0.81
LDHB-210ENST00000544151 ZNF541Q9H0D2 1346 aa20.12■□□□□ 0.81
LDHB-210ENST00000544151 DDNO94850 711 aaPredicted RBP20.12■□□□□ 0.81
LDHB-210ENST00000544151 DDX46Q7L014 1031 aaKnown RBP20.12■□□□□ 0.81
LDHB-210ENST00000544151 WDR63Q8IWG1 891 aa20.12■□□□□ 0.81
LDHB-210ENST00000544151 COL4A1P02462 1669 aa20.12■□□□□ 0.81
LDHB-210ENST00000544151 TRIM28Q13263 835 aaKnown RBP20.11■□□□□ 0.81
LDHB-210ENST00000544151 GRIPAP1Q4V328 841 aa20.11■□□□□ 0.81
LDHB-210ENST00000544151 ATP6V0A2Q9Y487 856 aa20.11■□□□□ 0.81
LDHB-210ENST00000544151 POTECB2RU33 542 aa20.1■□□□□ 0.81
LDHB-210ENST00000544151 FSTL1Q12841 308 aa20.1■□□□□ 0.81
LDHB-210ENST00000544151 GRAPQ13588 217 aa20.1■□□□□ 0.81
LDHB-210ENST00000544151 SMC1BQ8NDV3 1235 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms