RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 TCF3P15923 654 aa6.05□□□□□ -1.44
SCFD1-207ENST00000544052 RHOQP17081 205 aa6.05□□□□□ -1.44
SCFD1-207ENST00000544052 ATP4AP20648 1035 aa6.05□□□□□ -1.44
SCFD1-207ENST00000544052 NBPF10Q6P3W6 841 aaKnown RBP6.05□□□□□ -1.44
SCFD1-207ENST00000544052 ZSCAN1Q8NBB4 408 aa6.05□□□□□ -1.44
SCFD1-207ENST00000544052 ALKBH8Q96BT7 664 aaKnown RBP6.05□□□□□ -1.44
SCFD1-207ENST00000544052 DUSP9Q99956 384 aaKnown RBP6.05□□□□□ -1.44
SCFD1-207ENST00000544052 BACH2Q9BYV9 841 aa6.05□□□□□ -1.44
SCFD1-207ENST00000544052 ORC1Q13415 861 aa6.04□□□□□ -1.44
SCFD1-207ENST00000544052 BICDL1Q6ZP65 573 aa6.04□□□□□ -1.44
SCFD1-207ENST00000544052 PARP2Q9UGN5 583 aa6.04□□□□□ -1.44
SCFD1-207ENST00000544052 DMGDHQ9UI17 866 aaKnown RBP6.04□□□□□ -1.44
SCFD1-207ENST00000544052 FIGNL2A6NMB9 653 aa6.03□□□□□ -1.44
SCFD1-207ENST00000544052 TGFBR3LH3BV60 316 aa6.03□□□□□ -1.44
SCFD1-207ENST00000544052 VAMP1P23763 118 aa6.03□□□□□ -1.44
SCFD1-207ENST00000544052 USP5P45974 858 aa6.03□□□□□ -1.44
SCFD1-207ENST00000544052 ZDHHC3Q9NYG2 299 aa6.03□□□□□ -1.44
SCFD1-207ENST00000544052 ERBB4Q15303 1308 aa6.03□□□□□ -1.44
SCFD1-207ENST00000544052 PNMA6FA0A0J9YX94 578 aa6.03□□□□□ -1.44
SCFD1-207ENST00000544052 TATP17735 454 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-207ENST00000544052 MRPL58Q14197 206 aaKnown RBP6.03□□□□□ -1.44
SCFD1-207ENST00000544052 ARSJQ5FYB0 599 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-207ENST00000544052 LYSMD3Q7Z3D4 306 aa6.03□□□□□ -1.44
SCFD1-207ENST00000544052 PRPF40AO75400 957 aaKnown RBP6.02□□□□□ -1.45
SCFD1-207ENST00000544052 IDH3AP50213 366 aa6.02□□□□□ -1.45
SCFD1-207ENST00000544052 XPCQ01831 940 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-207ENST00000544052 LRRC69Q6ZNQ3 347 aa6.02□□□□□ -1.45
SCFD1-207ENST00000544052 TTLL8A6PVC2 850 aa6.02□□□□□ -1.45
SCFD1-207ENST00000544052 LORP23490 312 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-207ENST00000544052 ENOX2Q16206 610 aaKnown RBP6.02□□□□□ -1.45
SCFD1-207ENST00000544052 LDLRAD1Q5T700 205 aa6.02□□□□□ -1.45
SCFD1-207ENST00000544052 ZIC5Q96T25 663 aa6.02□□□□□ -1.45
SCFD1-207ENST00000544052 CFHR5Q9BXR6 569 aa6.02□□□□□ -1.45
SCFD1-207ENST00000544052 TIMMDC1Q9NPL8 285 aa6.02□□□□□ -1.45
SCFD1-207ENST00000544052 BTLAQ7Z6A9 289 aa6.01□□□□□ -1.45
SCFD1-207ENST00000544052 SOBPA7XYQ1 873 aa6□□□□□ -1.45
SCFD1-207ENST00000544052 PCSK2P16519 638 aa6□□□□□ -1.45
SCFD1-207ENST00000544052 MSX1P28360 303 aa6□□□□□ -1.45
SCFD1-207ENST00000544052 INPP5BP32019 993 aa6□□□□□ -1.45
SCFD1-207ENST00000544052 TRIP4Q15650 581 aaPredicted RBP6□□□□□ -1.45
SCFD1-207ENST00000544052 C9orf131Q5VYM1 1079 aa6□□□□□ -1.45
SCFD1-207ENST00000544052 CMTR1Q8N1G2 835 aaKnown RBP6□□□□□ -1.45
SCFD1-207ENST00000544052 PIK3R5Q8WYR1 880 aa6□□□□□ -1.45
SCFD1-207ENST00000544052 GPAMQ9HCL2 828 aa6□□□□□ -1.45
SCFD1-207ENST00000544052 EIF1AYO14602 144 aaKnown RBP6□□□□□ -1.45
SCFD1-207ENST00000544052 MAN1A2O60476 641 aa6□□□□□ -1.45
SCFD1-207ENST00000544052 VSIG8P0DPA2 414 aa6□□□□□ -1.45
SCFD1-207ENST00000544052 GRNP28799 593 aaKnown RBP6□□□□□ -1.45
SCFD1-207ENST00000544052 ATP2B2Q01814 1243 aa6□□□□□ -1.45
SCFD1-207ENST00000544052 IER5Q5VY09 327 aa6□□□□□ -1.45
SCFD1-207ENST00000544052 TTC16Q8NEE8 873 aa6□□□□□ -1.45
SCFD1-207ENST00000544052 MRS2Q9HD23 443 aa6□□□□□ -1.45
SCFD1-207ENST00000544052 FOXD3Q9UJU5 478 aaPredicted RBP6□□□□□ -1.45
SCFD1-207ENST00000544052 RTCBQ9Y3I0 505 aaKnown RBP6□□□□□ -1.45
SCFD1-207ENST00000544052 SOS2Q07890 1332 aaPredicted RBP6□□□□□ -1.45
SCFD1-207ENST00000544052 A0A1B0GTH6 734 aa5.99□□□□□ -1.45
SCFD1-207ENST00000544052 DAB2P98082 770 aa5.99□□□□□ -1.45
SCFD1-207ENST00000544052 HIF1AQ16665 826 aa5.99□□□□□ -1.45
SCFD1-207ENST00000544052 WDR44Q5JSH3 913 aa5.99□□□□□ -1.45
SCFD1-207ENST00000544052 TMC4Q7Z404 712 aa5.99□□□□□ -1.45
SCFD1-207ENST00000544052 CSRNP1Q96S65 589 aa5.99□□□□□ -1.45
SCFD1-207ENST00000544052 NEUROD4Q9HD90 331 aa5.99□□□□□ -1.45
SCFD1-207ENST00000544052 KCNMB2Q9Y691 235 aa5.99□□□□□ -1.45
SCFD1-207ENST00000544052 A0A1W2PNR3 127 aa5.98□□□□□ -1.45
SCFD1-207ENST00000544052 SORBS3O60504 671 aa5.98□□□□□ -1.45
SCFD1-207ENST00000544052 ARSDP51689 593 aa5.98□□□□□ -1.45
SCFD1-207ENST00000544052 PSMD2Q13200 908 aa5.98□□□□□ -1.45
SCFD1-207ENST00000544052 USPL1Q5W0Q7 1092 aa5.98□□□□□ -1.45
SCFD1-207ENST00000544052 RUBCNLQ9H714 662 aa5.98□□□□□ -1.45
SCFD1-207ENST00000544052 FAM13BQ9NYF5 915 aa5.98□□□□□ -1.45
SCFD1-207ENST00000544052 ANKIB1Q9P2G1 1089 aa5.98□□□□□ -1.45
SCFD1-207ENST00000544052 TNFRSF21O75509 655 aa5.98□□□□□ -1.45
SCFD1-207ENST00000544052 TMEM87AQ8NBN3 555 aa5.98□□□□□ -1.45
SCFD1-207ENST00000544052 DNMT3LQ9UJW3 386 aa5.98□□□□□ -1.45
SCFD1-207ENST00000544052 UBAP1LF5GYI3 381 aa5.97□□□□□ -1.45
SCFD1-207ENST00000544052 TYRO3Q06418 890 aa5.97□□□□□ -1.45
SCFD1-207ENST00000544052 ALG1LQ6GMV1 187 aa5.97□□□□□ -1.45
SCFD1-207ENST00000544052 PI16Q6UXB8 463 aa5.97□□□□□ -1.45
SCFD1-207ENST00000544052 GAS2L1Q99501 681 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-207ENST00000544052 BCL11AQ9H165 835 aa5.97□□□□□ -1.45
SCFD1-207ENST00000544052 TMEM63CQ9P1W3 806 aa5.97□□□□□ -1.45
SCFD1-207ENST00000544052 VTI1BQ9UEU0 232 aa5.97□□□□□ -1.45
SCFD1-207ENST00000544052 GPC6Q9Y625 555 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-207ENST00000544052 IRS1P35568 1242 aa5.97□□□□□ -1.45
SCFD1-207ENST00000544052 ZNF438Q7Z4V0 828 aa5.97□□□□□ -1.45
SCFD1-207ENST00000544052 CEP63Q96MT8 703 aa5.97□□□□□ -1.45
SCFD1-207ENST00000544052 USP35Q9P2H5 1018 aa5.97□□□□□ -1.45
SCFD1-207ENST00000544052 LOC105371045A0A1W2PR82 267 aa5.96□□□□□ -1.46
SCFD1-207ENST00000544052 CPNE3O75131 537 aaKnown RBP5.96□□□□□ -1.46
SCFD1-207ENST00000544052 RPLP1P05386 114 aaKnown RBP5.96□□□□□ -1.46
SCFD1-207ENST00000544052 GNA15P30679 374 aa5.96□□□□□ -1.46
SCFD1-207ENST00000544052 FGD1P98174 961 aa5.96□□□□□ -1.46
SCFD1-207ENST00000544052 HDLBPQ00341 1268 aaKnown RBP5.96□□□□□ -1.46
SCFD1-207ENST00000544052 ZCCHC2Q9C0B9 1178 aaKnown RBP5.96□□□□□ -1.46
SCFD1-207ENST00000544052 GJA3Q9Y6H8 435 aa5.96□□□□□ -1.46
SCFD1-207ENST00000544052 SENP3-EIF4A1A0A087X0R7 540 aa5.95□□□□□ -1.46
SCFD1-207ENST00000544052 PPFIA3O75145 1194 aa5.95□□□□□ -1.46
SCFD1-207ENST00000544052 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.95□□□□□ -1.46
SCFD1-207ENST00000544052 EPS8L3Q8TE67 593 aaKnown RBP5.95□□□□□ -1.46
SCFD1-207ENST00000544052 ELP3Q9H9T3 547 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 202.7 ms