RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 TRIM28Q13263 835 aaKnown RBP18.34■□□□□ 0.53
TNFRSF1A-216ENST00000543995 BEND3Q5T5X7 828 aa18.34■□□□□ 0.53
TNFRSF1A-216ENST00000543995 CLUAP1Q96AJ1 413 aa18.34■□□□□ 0.53
TNFRSF1A-216ENST00000543995 SRCIN1Q9C0H9 1055 aa18.34■□□□□ 0.53
TNFRSF1A-216ENST00000543995 TRMT112Q9UI30 125 aaKnown RBP18.34■□□□□ 0.53
TNFRSF1A-216ENST00000543995 LRP5O75197 1615 aa18.34■□□□□ 0.53
TNFRSF1A-216ENST00000543995 PXDNLA1KZ92 1463 aa18.33■□□□□ 0.53
TNFRSF1A-216ENST00000543995 PRR5LQ6MZQ0 368 aa18.33■□□□□ 0.53
TNFRSF1A-216ENST00000543995 NUTM1Q86Y26 1132 aa18.33■□□□□ 0.53
TNFRSF1A-216ENST00000543995 CCDC24Q8N4L8 307 aa18.33■□□□□ 0.53
TNFRSF1A-216ENST00000543995 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.33■□□□□ 0.53
TNFRSF1A-216ENST00000543995 IBTKQ9P2D0 1353 aaPredicted RBP18.33■□□□□ 0.53
TNFRSF1A-216ENST00000543995 NTSR2O95665 410 aa18.33■□□□□ 0.52
TNFRSF1A-216ENST00000543995 RTL5Q5HYW3 569 aaPredicted RBP18.33■□□□□ 0.52
TNFRSF1A-216ENST00000543995 FTSJ3Q8IY81 847 aaKnown RBP18.33■□□□□ 0.52
TNFRSF1A-216ENST00000543995 TNNQ9UQP3 1299 aa18.33■□□□□ 0.52
TNFRSF1A-216ENST00000543995 CCT4P50991 539 aaKnown RBP18.32■□□□□ 0.52
TNFRSF1A-216ENST00000543995 ERFEQ4G0M1 354 aa18.32■□□□□ 0.52
TNFRSF1A-216ENST00000543995 N4BP2Q86UW6 1770 aaPredicted RBP18.31■□□□□ 0.52
TNFRSF1A-216ENST00000543995 SH3TC1Q8TE82 1336 aa18.31■□□□□ 0.52
TNFRSF1A-216ENST00000543995 PLIN1O60240 522 aa18.31■□□□□ 0.52
TNFRSF1A-216ENST00000543995 ALDH1L1O75891 902 aa18.31■□□□□ 0.52
TNFRSF1A-216ENST00000543995 GCKRQ14397 625 aa18.31■□□□□ 0.52
TNFRSF1A-216ENST00000543995 FAM89AQ96GI7 184 aa18.31■□□□□ 0.52
TNFRSF1A-216ENST00000543995 ABCC4O15439 1325 aa18.3■□□□□ 0.52
TNFRSF1A-216ENST00000543995 RNF123Q5XPI4 1314 aa18.3■□□□□ 0.52
TNFRSF1A-216ENST00000543995 DZIP1LQ8IYY4 767 aaKnown RBP18.3■□□□□ 0.52
TNFRSF1A-216ENST00000543995 ZBTB38Q8NAP3 1195 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF1A-216ENST00000543995 C9orf78Q9NZ63 289 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF1A-216ENST00000543995 KIF13BQ9NQT8 1826 aa18.29■□□□□ 0.52
TNFRSF1A-216ENST00000543995 MS4A1P11836 297 aa18.29■□□□□ 0.52
TNFRSF1A-216ENST00000543995 JARID2Q92833 1246 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF1A-216ENST00000543995 C10orf71Q711Q0 1435 aa18.29■□□□□ 0.52
TNFRSF1A-216ENST00000543995 PCCAP05165 728 aaPredicted RBP18.28■□□□□ 0.52
TNFRSF1A-216ENST00000543995 UBE3BQ7Z3V4 1068 aa18.28■□□□□ 0.52
TNFRSF1A-216ENST00000543995 SYNE4Q8N205 404 aa18.28■□□□□ 0.52
TNFRSF1A-216ENST00000543995 FHDC1Q9C0D6 1143 aaPredicted RBP18.28■□□□□ 0.52
TNFRSF1A-216ENST00000543995 CD2APQ9Y5K6 639 aa18.28■□□□□ 0.52
TNFRSF1A-216ENST00000543995 ANKRD31Q8N7Z5 1873 aa18.28■□□□□ 0.52
TNFRSF1A-216ENST00000543995 ABCC12Q96J65 1359 aa18.28■□□□□ 0.52
TNFRSF1A-216ENST00000543995 BRIP1Q9BX63 1249 aa18.28■□□□□ 0.52
TNFRSF1A-216ENST00000543995 GRM8O00222 908 aa18.27■□□□□ 0.51
TNFRSF1A-216ENST00000543995 IRS4O14654 1257 aaPredicted RBP18.27■□□□□ 0.51
TNFRSF1A-216ENST00000543995 PDE6BP35913 854 aa18.27■□□□□ 0.51
TNFRSF1A-216ENST00000543995 RRP1P56182 461 aaKnown RBP18.27■□□□□ 0.51
TNFRSF1A-216ENST00000543995 INTS3Q68E01 1043 aaKnown RBP18.27■□□□□ 0.51
TNFRSF1A-216ENST00000543995 TMEM57Q8N5G2 664 aa18.27■□□□□ 0.51
TNFRSF1A-216ENST00000543995 DDX60Q8IY21 1712 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-216ENST00000543995 H7C1W4 665 aa18.26■□□□□ 0.51
TNFRSF1A-216ENST00000543995 HCLS1P14317 486 aaPredicted RBP18.26■□□□□ 0.51
TNFRSF1A-216ENST00000543995 HSP90B1P14625 803 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-216ENST00000543995 ITPRIPQ8IWB1 547 aa18.26■□□□□ 0.51
TNFRSF1A-216ENST00000543995 PANK1Q8TE04 598 aa18.26■□□□□ 0.51
TNFRSF1A-216ENST00000543995 TNRC6CQ9HCJ0 1690 aaKnown RBP18.25■□□□□ 0.51
TNFRSF1A-216ENST00000543995 RLBP1P12271 317 aa18.25■□□□□ 0.51
TNFRSF1A-216ENST00000543995 SLC10A5Q5PT55 438 aa18.25■□□□□ 0.51
TNFRSF1A-216ENST00000543995 NLRP3Q96P20 1036 aa18.25■□□□□ 0.51
TNFRSF1A-216ENST00000543995 LAMB2P55268 1798 aa18.25■□□□□ 0.51
TNFRSF1A-216ENST00000543995 CDHR2Q9BYE9 1310 aa18.25■□□□□ 0.51
TNFRSF1A-216ENST00000543995 CENPBP07199 599 aaPredicted RBP18.24■□□□□ 0.51
TNFRSF1A-216ENST00000543995 SUPT16HQ9Y5B9 1047 aaKnown RBP18.24■□□□□ 0.51
TNFRSF1A-216ENST00000543995 H0YIN7 160 aa18.23■□□□□ 0.51
TNFRSF1A-216ENST00000543995 PDE8AO60658 829 aa18.23■□□□□ 0.51
TNFRSF1A-216ENST00000543995 NBPF7P0C2Y1 421 aaPredicted RBP18.23■□□□□ 0.51
TNFRSF1A-216ENST00000543995 TGFB2P61812 414 aa18.23■□□□□ 0.51
TNFRSF1A-216ENST00000543995 C2CD5Q86YS7 1000 aa18.23■□□□□ 0.51
TNFRSF1A-216ENST00000543995 SYT17Q9BSW7 474 aa18.23■□□□□ 0.51
TNFRSF1A-216ENST00000543995 USP44Q9H0E7 712 aa18.23■□□□□ 0.51
TNFRSF1A-216ENST00000543995 RIC1Q4ADV7 1423 aa18.23■□□□□ 0.51
TNFRSF1A-216ENST00000543995 MYH3P11055 1940 aa18.23■□□□□ 0.51
TNFRSF1A-216ENST00000543995 CHRNA5P30532 468 aa18.23■□□□□ 0.51
TNFRSF1A-216ENST00000543995 CASP7P55210 303 aa18.23■□□□□ 0.51
TNFRSF1A-216ENST00000543995 PDE3AQ14432 1141 aa18.23■□□□□ 0.51
TNFRSF1A-216ENST00000543995 A0A0G2JLW4 131 aa18.22■□□□□ 0.51
TNFRSF1A-216ENST00000543995 C20orf194Q5TEA3 1177 aa18.22■□□□□ 0.51
TNFRSF1A-216ENST00000543995 NLGN2Q8NFZ4 835 aa18.22■□□□□ 0.51
TNFRSF1A-216ENST00000543995 RPGRQ92834 1020 aaKnown RBP18.22■□□□□ 0.51
TNFRSF1A-216ENST00000543995 PDZRN3Q9UPQ7 1066 aa18.22■□□□□ 0.51
TNFRSF1A-216ENST00000543995 COL11A2P13942 1736 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF1A-216ENST00000543995 UBTFL1P0CB47 393 aaPredicted RBP18.21■□□□□ 0.51
TNFRSF1A-216ENST00000543995 DPEP1P16444 411 aa18.21■□□□□ 0.51
TNFRSF1A-216ENST00000543995 C3orf67Q6ZVT6 689 aa18.21■□□□□ 0.51
TNFRSF1A-216ENST00000543995 ZNF622Q969S3 477 aaKnown RBP eCLIP18.21■□□□□ 0.51
TNFRSF1A-216ENST00000543995 COG6Q9Y2V7 657 aa18.21■□□□□ 0.51
TNFRSF1A-216ENST00000543995 UTYO14607 1347 aa18.21■□□□□ 0.51
TNFRSF1A-216ENST00000543995 KIAA1551Q9HCM1 1747 aa18.21■□□□□ 0.5
TNFRSF1A-216ENST00000543995 MVPQ14764 893 aaKnown RBP18.2■□□□□ 0.5
TNFRSF1A-216ENST00000543995 MEIS3Q99687 375 aa18.2■□□□□ 0.5
TNFRSF1A-216ENST00000543995 DLEC1Q9Y238 1755 aa18.2■□□□□ 0.5
TNFRSF1A-216ENST00000543995 GNAI3P08754 354 aa18.19■□□□□ 0.5
TNFRSF1A-216ENST00000543995 SRGNP10124 158 aa18.19■□□□□ 0.5
TNFRSF1A-216ENST00000543995 PLA2G12BQ9BX93 195 aa18.19■□□□□ 0.5
TNFRSF1A-216ENST00000543995 HDAC5Q9UQL6 1122 aa18.19■□□□□ 0.5
TNFRSF1A-216ENST00000543995 CACNA1SQ13698 1873 aa18.19■□□□□ 0.5
TNFRSF1A-216ENST00000543995 KLRG2A4D1S0 409 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF1A-216ENST00000543995 NPR1P16066 1061 aa18.18■□□□□ 0.5
TNFRSF1A-216ENST00000543995 CTSWP56202 376 aa18.18■□□□□ 0.5
TNFRSF1A-216ENST00000543995 CRY2Q49AN0 593 aa18.18■□□□□ 0.5
TNFRSF1A-216ENST00000543995 MASTLQ96GX5 879 aa18.18■□□□□ 0.5
TNFRSF1A-216ENST00000543995 SUCLG2Q96I99 432 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms