RNA–Protein interactions for RNA: ENST00000543991.1

SMCO2-206, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-206ENST00000543991 RIMBP3CA6NJZ7 1639 aa10.4□□□□□ -0.75
SMCO2-206ENST00000543991 RIMBP3BA6NNM3 1639 aa10.4□□□□□ -0.75
SMCO2-206ENST00000543991 RIMBP3Q9UFD9 1639 aa10.4□□□□□ -0.75
SMCO2-206ENST00000543991 TCF3P15923 654 aa10.39□□□□□ -0.75
SMCO2-206ENST00000543991 IDH3AP50213 366 aa10.39□□□□□ -0.75
SMCO2-206ENST00000543991 C8orf34Q49A92 452 aa10.39□□□□□ -0.75
SMCO2-206ENST00000543991 GGNBP2Q9H3C7 697 aa10.39□□□□□ -0.75
SMCO2-206ENST00000543991 SOS2Q07890 1332 aaPredicted RBP10.38□□□□□ -0.75
SMCO2-206ENST00000543991 NEFLP07196 543 aa10.38□□□□□ -0.75
SMCO2-206ENST00000543991 RHOQP17081 205 aa10.38□□□□□ -0.75
SMCO2-206ENST00000543991 MSX1P28360 303 aa10.38□□□□□ -0.75
SMCO2-206ENST00000543991 XPCQ01831 940 aaPredicted RBP10.38□□□□□ -0.75
SMCO2-206ENST00000543991 ARSJQ5FYB0 599 aaPredicted RBP10.38□□□□□ -0.75
SMCO2-206ENST00000543991 DUSP9Q99956 384 aaKnown RBP10.38□□□□□ -0.75
SMCO2-206ENST00000543991 PARP2Q9UGN5 583 aa10.38□□□□□ -0.75
SMCO2-206ENST00000543991 MRC2Q9UBG0 1479 aa10.37□□□□□ -0.75
SMCO2-206ENST00000543991 PNMA6FA0A0J9YX94 578 aa10.37□□□□□ -0.75
SMCO2-206ENST00000543991 RECKO95980 971 aa10.37□□□□□ -0.75
SMCO2-206ENST00000543991 INPP5BP32019 993 aa10.37□□□□□ -0.75
SMCO2-206ENST00000543991 ARSDP51689 593 aa10.37□□□□□ -0.75
SMCO2-206ENST00000543991 MRPL58Q14197 206 aaKnown RBP10.37□□□□□ -0.75
SMCO2-206ENST00000543991 ALG1LQ6GMV1 187 aa10.37□□□□□ -0.75
SMCO2-206ENST00000543991 BTLAQ7Z6A9 289 aa10.37□□□□□ -0.75
SMCO2-206ENST00000543991 WWC3Q9ULE0 1092 aa10.37□□□□□ -0.75
SMCO2-206ENST00000543991 KIF21AQ7Z4S6 1674 aa10.37□□□□□ -0.75
SMCO2-206ENST00000543991 ITGAEP38570 1179 aa10.36□□□□□ -0.75
SMCO2-206ENST00000543991 SMCPP49901 116 aaPredicted RBP10.36□□□□□ -0.75
SMCO2-206ENST00000543991 LRRC69Q6ZNQ3 347 aa10.36□□□□□ -0.75
SMCO2-206ENST00000543991 CSRNP1Q96S65 589 aa10.36□□□□□ -0.75
SMCO2-206ENST00000543991 WDR62O43379 1518 aa10.35□□□□□ -0.75
SMCO2-206ENST00000543991 FIGNL2A6NMB9 653 aa10.35□□□□□ -0.75
SMCO2-206ENST00000543991 BMP1P13497 986 aa10.35□□□□□ -0.75
SMCO2-206ENST00000543991 CTC1Q2NKJ3 1217 aa10.35□□□□□ -0.75
SMCO2-206ENST00000543991 TSNAXIP1Q2TAA8 658 aa10.35□□□□□ -0.75
SMCO2-206ENST00000543991 TMC4Q7Z404 712 aa10.35□□□□□ -0.75
SMCO2-206ENST00000543991 TRIM46Q7Z4K8 759 aa10.35□□□□□ -0.75
SMCO2-206ENST00000543991 SETDB2Q96T68 719 aa10.35□□□□□ -0.75
SMCO2-206ENST00000543991 FNDC3AQ9Y2H6 1198 aaKnown RBP10.35□□□□□ -0.75
SMCO2-206ENST00000543991 A0A1W2PNR3 127 aa10.34□□□□□ -0.75
SMCO2-206ENST00000543991 A6NHS1 94 aa10.34□□□□□ -0.75
SMCO2-206ENST00000543991 DAB2P98082 770 aa10.34□□□□□ -0.75
SMCO2-206ENST00000543991 CYB5RLQ6IPT4 315 aa10.34□□□□□ -0.75
SMCO2-206ENST00000543991 XKR5Q6UX68 686 aa10.34□□□□□ -0.75
SMCO2-206ENST00000543991 DNAJC25Q9H1X3 360 aa10.34□□□□□ -0.75
SMCO2-206ENST00000543991 RTCBQ9Y3I0 505 aaKnown RBP10.34□□□□□ -0.75
SMCO2-206ENST00000543991 ARHGEF11O15085 1522 aa10.33□□□□□ -0.76
SMCO2-206ENST00000543991 EIF1AYO14602 144 aaKnown RBP10.33□□□□□ -0.76
SMCO2-206ENST00000543991 DGAT1O75907 488 aa10.33□□□□□ -0.76
SMCO2-206ENST00000543991 ORC1Q13415 861 aa10.33□□□□□ -0.76
SMCO2-206ENST00000543991 FBF1Q8TES7 1133 aa10.33□□□□□ -0.76
SMCO2-206ENST00000543991 BACH2Q9BYV9 841 aa10.33□□□□□ -0.76
SMCO2-206ENST00000543991 CRISPLD1Q9H336 500 aa10.33□□□□□ -0.76
SMCO2-206ENST00000543991 MRS2Q9HD23 443 aa10.33□□□□□ -0.76
SMCO2-206ENST00000543991 DYRK1BQ9Y463 629 aa10.33□□□□□ -0.76
SMCO2-206ENST00000543991 GJA3Q9Y6H8 435 aa10.33□□□□□ -0.76
SMCO2-206ENST00000543991 BAZ1BQ9UIG0 1483 aaKnown RBP10.33□□□□□ -0.76
SMCO2-206ENST00000543991 PSMD2Q13200 908 aa10.32□□□□□ -0.76
SMCO2-206ENST00000543991 CMTR1Q8N1G2 835 aaKnown RBP10.32□□□□□ -0.76
SMCO2-206ENST00000543991 ZFP42Q96MM3 310 aa10.32□□□□□ -0.76
SMCO2-206ENST00000543991 FAM161BQ96MY7 647 aa10.32□□□□□ -0.76
SMCO2-206ENST00000543991 RNF19AQ9NV58 838 aa10.32□□□□□ -0.76
SMCO2-206ENST00000543991 USP20Q9Y2K6 914 aa10.32□□□□□ -0.76
SMCO2-206ENST00000543991 SORBS3O60504 671 aa10.31□□□□□ -0.76
SMCO2-206ENST00000543991 F11P03951 625 aa10.31□□□□□ -0.76
SMCO2-206ENST00000543991 EPB42P16452 691 aa10.31□□□□□ -0.76
SMCO2-206ENST00000543991 PDE12Q6L8Q7 609 aaKnown RBP10.31□□□□□ -0.76
SMCO2-206ENST00000543991 CFHR5Q9BXR6 569 aa10.31□□□□□ -0.76
SMCO2-206ENST00000543991 KCNMB2Q9Y691 235 aa10.31□□□□□ -0.76
SMCO2-206ENST00000543991 UBAP1LF5GYI3 381 aa10.3□□□□□ -0.76
SMCO2-206ENST00000543991 CPNE3O75131 537 aaKnown RBP10.3□□□□□ -0.76
SMCO2-206ENST00000543991 TYRO3Q06418 890 aa10.3□□□□□ -0.76
SMCO2-206ENST00000543991 TRIP4Q15650 581 aaPredicted RBP10.3□□□□□ -0.76
SMCO2-206ENST00000543991 PKDCCQ504Y2 493 aa10.3□□□□□ -0.76
SMCO2-206ENST00000543991 ZNF438Q7Z4V0 828 aa10.3□□□□□ -0.76
SMCO2-206ENST00000543991 NLRP8Q86W28 1048 aa10.3□□□□□ -0.76
SMCO2-206ENST00000543991 PGBD3Q8N328 593 aa10.3□□□□□ -0.76
SMCO2-206ENST00000543991 CEP63Q96MT8 703 aa10.3□□□□□ -0.76
SMCO2-206ENST00000543991 FRMD6Q96NE9 622 aa10.3□□□□□ -0.76
SMCO2-206ENST00000543991 GPAMQ9HCL2 828 aa10.3□□□□□ -0.76
SMCO2-206ENST00000543991 DNMT3LQ9UJW3 386 aa10.3□□□□□ -0.76
SMCO2-206ENST00000543991 AXIN1O15169 862 aa10.29□□□□□ -0.76
SMCO2-206ENST00000543991 TNFRSF21O75509 655 aa10.29□□□□□ -0.76
SMCO2-206ENST00000543991 GNA15P30679 374 aa10.29□□□□□ -0.76
SMCO2-206ENST00000543991 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.29□□□□□ -0.76
SMCO2-206ENST00000543991 CRIPAKQ8N1N5 446 aa10.29□□□□□ -0.76
SMCO2-206ENST00000543991 RUBCNLQ9H714 662 aa10.29□□□□□ -0.76
SMCO2-206ENST00000543991 SCAMP3O14828 347 aaKnown RBP10.28□□□□□ -0.76
SMCO2-206ENST00000543991 LDLRAD1Q5T700 205 aa10.28□□□□□ -0.76
SMCO2-206ENST00000543991 SAMD5Q5TGI4 173 aa10.28□□□□□ -0.76
SMCO2-206ENST00000543991 SNX29Q8TEQ0 813 aa10.28□□□□□ -0.76
SMCO2-206ENST00000543991 C11orf16Q9NQ32 467 aa10.28□□□□□ -0.76
SMCO2-206ENST00000543991 VTI1BQ9UEU0 232 aa10.28□□□□□ -0.76
SMCO2-206ENST00000543991 CADPSQ9ULU8 1353 aa10.27□□□□□ -0.76
SMCO2-206ENST00000543991 GRNP28799 593 aaKnown RBP10.27□□□□□ -0.77
SMCO2-206ENST00000543991 GAS2L1Q99501 681 aaPredicted RBP10.27□□□□□ -0.77
SMCO2-206ENST00000543991 ELP3Q9H9T3 547 aa10.27□□□□□ -0.77
SMCO2-206ENST00000543991 FOXD3Q9UJU5 478 aaPredicted RBP10.27□□□□□ -0.77
SMCO2-206ENST00000543991 NRG2O14511 850 aaPredicted RBP10.26□□□□□ -0.77
SMCO2-206ENST00000543991 TMEM87AQ8NBN3 555 aa10.26□□□□□ -0.77
SMCO2-206ENST00000543991 ZFYVE28Q9HCC9 887 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms