RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 NYXQ9GZU5 481 aa17.31■□□□□ 0.36
SP140-213ENST00000543928 NTSR2O95665 410 aa17.3■□□□□ 0.36
SP140-213ENST00000543928 GTF2E1P29083 439 aaPredicted RBP17.3■□□□□ 0.36
SP140-213ENST00000543928 CWF19L2Q2TBE0 894 aaKnown RBP17.3■□□□□ 0.36
SP140-213ENST00000543928 NUTM1Q86Y26 1132 aa17.3■□□□□ 0.36
SP140-213ENST00000543928 CCDC191Q8NCU4 936 aa17.3■□□□□ 0.36
SP140-213ENST00000543928 LINS1Q8NG48 757 aa17.3■□□□□ 0.36
SP140-213ENST00000543928 ARHGAP45Q92619 1136 aa17.3■□□□□ 0.36
SP140-213ENST00000543928 CWC25Q9NXE8 425 aaPredicted RBP17.3■□□□□ 0.36
SP140-213ENST00000543928 SRCAPQ6ZRS2 3230 aa17.3■□□□□ 0.36
SP140-213ENST00000543928 C10orf71Q711Q0 1435 aa17.3■□□□□ 0.36
SP140-213ENST00000543928 NEURL1BA8MQ27 555 aa17.29■□□□□ 0.36
SP140-213ENST00000543928 ST5P78524 1137 aa17.29■□□□□ 0.36
SP140-213ENST00000543928 BEND3Q5T5X7 828 aa17.29■□□□□ 0.36
SP140-213ENST00000543928 ZKSCAN2Q63HK3 967 aa17.29■□□□□ 0.36
SP140-213ENST00000543928 FHDC1Q9C0D6 1143 aaPredicted RBP17.29■□□□□ 0.36
SP140-213ENST00000543928 TRMT112Q9UI30 125 aaKnown RBP17.29■□□□□ 0.36
SP140-213ENST00000543928 TRIM27P14373 513 aa17.28■□□□□ 0.36
SP140-213ENST00000543928 ERFEQ4G0M1 354 aa17.28■□□□□ 0.36
SP140-213ENST00000543928 ATF7IPQ6VMQ6 1270 aa17.28■□□□□ 0.36
SP140-213ENST00000543928 CD2APQ9Y5K6 639 aa17.28■□□□□ 0.36
SP140-213ENST00000543928 RNF123Q5XPI4 1314 aa17.27■□□□□ 0.36
SP140-213ENST00000543928 PXDNLA1KZ92 1463 aa17.27■□□□□ 0.36
SP140-213ENST00000543928 SRCIN1Q9C0H9 1055 aa17.27■□□□□ 0.36
SP140-213ENST00000543928 TNNQ9UQP3 1299 aa17.27■□□□□ 0.36
SP140-213ENST00000543928 ABCC12Q96J65 1359 aa17.27■□□□□ 0.35
SP140-213ENST00000543928 SH3TC1Q8TE82 1336 aa17.26■□□□□ 0.35
SP140-213ENST00000543928 ALDH1L1O75891 902 aa17.26■□□□□ 0.35
SP140-213ENST00000543928 GCKRQ14397 625 aa17.26■□□□□ 0.35
SP140-213ENST00000543928 RTL5Q5HYW3 569 aaPredicted RBP17.26■□□□□ 0.35
SP140-213ENST00000543928 SYNE4Q8N205 404 aa17.26■□□□□ 0.35
SP140-213ENST00000543928 FAM89AQ96GI7 184 aa17.26■□□□□ 0.35
SP140-213ENST00000543928 RNF216Q9NWF9 866 aaPredicted RBP17.26■□□□□ 0.35
SP140-213ENST00000543928 KIF13BQ9NQT8 1826 aa17.26■□□□□ 0.35
SP140-213ENST00000543928 ZBTB38Q8NAP3 1195 aaPredicted RBP17.25■□□□□ 0.35
SP140-213ENST00000543928 JARID2Q92833 1246 aaPredicted RBP17.25■□□□□ 0.35
SP140-213ENST00000543928 CLUAP1Q96AJ1 413 aa17.25■□□□□ 0.35
SP140-213ENST00000543928 SYT17Q9BSW7 474 aa17.25■□□□□ 0.35
SP140-213ENST00000543928 BRIP1Q9BX63 1249 aa17.25■□□□□ 0.35
SP140-213ENST00000543928 ANKRD31Q8N7Z5 1873 aa17.24■□□□□ 0.35
SP140-213ENST00000543928 ABCC4O15439 1325 aa17.24■□□□□ 0.35
SP140-213ENST00000543928 PCCAP05165 728 aaPredicted RBP17.24■□□□□ 0.35
SP140-213ENST00000543928 CCT4P50991 539 aaKnown RBP17.24■□□□□ 0.35
SP140-213ENST00000543928 SLC10A5Q5PT55 438 aa17.24■□□□□ 0.35
SP140-213ENST00000543928 HCLS1P14317 486 aaPredicted RBP17.23■□□□□ 0.35
SP140-213ENST00000543928 PDE6BP35913 854 aa17.23■□□□□ 0.35
SP140-213ENST00000543928 UBE3BQ7Z3V4 1068 aa17.23■□□□□ 0.35
SP140-213ENST00000543928 NLGN2Q8NFZ4 835 aa17.23■□□□□ 0.35
SP140-213ENST00000543928 H7C1W4 665 aa17.22■□□□□ 0.35
SP140-213ENST00000543928 IRS4O14654 1257 aaPredicted RBP17.22■□□□□ 0.35
SP140-213ENST00000543928 PLIN1O60240 522 aa17.22■□□□□ 0.35
SP140-213ENST00000543928 CHRNA5P30532 468 aa17.22■□□□□ 0.35
SP140-213ENST00000543928 TGFB2P61812 414 aa17.22■□□□□ 0.35
SP140-213ENST00000543928 C2CD5Q86YS7 1000 aa17.22■□□□□ 0.35
SP140-213ENST00000543928 FTSJ3Q8IY81 847 aaKnown RBP17.22■□□□□ 0.35
SP140-213ENST00000543928 C9orf78Q9NZ63 289 aaPredicted RBP17.22■□□□□ 0.35
SP140-213ENST00000543928 TNRC6CQ9HCJ0 1690 aaKnown RBP17.22■□□□□ 0.35
SP140-213ENST00000543928 N4BP2Q86UW6 1770 aaPredicted RBP17.22■□□□□ 0.35
SP140-213ENST00000543928 CDHR2Q9BYE9 1310 aa17.21■□□□□ 0.35
SP140-213ENST00000543928 RIC1Q4ADV7 1423 aa17.21■□□□□ 0.35
SP140-213ENST00000543928 A0A0G2JLW4 131 aa17.21■□□□□ 0.35
SP140-213ENST00000543928 GRM8O00222 908 aa17.21■□□□□ 0.35
SP140-213ENST00000543928 DPEP1P16444 411 aa17.21■□□□□ 0.35
SP140-213ENST00000543928 INTS3Q68E01 1043 aaKnown RBP17.21■□□□□ 0.35
SP140-213ENST00000543928 C3orf67Q6ZVT6 689 aa17.21■□□□□ 0.35
SP140-213ENST00000543928 DZIP1LQ8IYY4 767 aaKnown RBP17.21■□□□□ 0.35
SP140-213ENST00000543928 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.21■□□□□ 0.35
SP140-213ENST00000543928 KLRG2A4D1S0 409 aaPredicted RBP17.2■□□□□ 0.34
SP140-213ENST00000543928 H0YIN7 160 aa17.2■□□□□ 0.34
SP140-213ENST00000543928 RLBP1P12271 317 aa17.2■□□□□ 0.34
SP140-213ENST00000543928 CASP7P55210 303 aa17.2■□□□□ 0.34
SP140-213ENST00000543928 TMEM57Q8N5G2 664 aa17.2■□□□□ 0.34
SP140-213ENST00000543928 NLRP3Q96P20 1036 aa17.2■□□□□ 0.34
SP140-213ENST00000543928 PDZRN3Q9UPQ7 1066 aa17.2■□□□□ 0.34
SP140-213ENST00000543928 KIAA1551Q9HCM1 1747 aa17.2■□□□□ 0.34
SP140-213ENST00000543928 DDX60Q8IY21 1712 aaKnown RBP17.19■□□□□ 0.34
SP140-213ENST00000543928 MS4A1P11836 297 aa17.19■□□□□ 0.34
SP140-213ENST00000543928 HSP90B1P14625 803 aaKnown RBP17.19■□□□□ 0.34
SP140-213ENST00000543928 PANK1Q8TE04 598 aa17.19■□□□□ 0.34
SP140-213ENST00000543928 USP44Q9H0E7 712 aa17.19■□□□□ 0.34
SP140-213ENST00000543928 COL11A2P13942 1736 aaPredicted RBP17.18■□□□□ 0.34
SP140-213ENST00000543928 LAMB2P55268 1798 aa17.18■□□□□ 0.34
SP140-213ENST00000543928 PDE8AO60658 829 aa17.18■□□□□ 0.34
SP140-213ENST00000543928 NBPF7P0C2Y1 421 aaPredicted RBP17.18■□□□□ 0.34
SP140-213ENST00000543928 SRGNP10124 158 aa17.18■□□□□ 0.34
SP140-213ENST00000543928 CRY2Q49AN0 593 aa17.18■□□□□ 0.34
SP140-213ENST00000543928 UTYO14607 1347 aa17.18■□□□□ 0.34
SP140-213ENST00000543928 KCNA3P22001 575 aa17.17■□□□□ 0.34
SP140-213ENST00000543928 RRP1P56182 461 aaKnown RBP17.17■□□□□ 0.34
SP140-213ENST00000543928 RPGRQ92834 1020 aaKnown RBP17.17■□□□□ 0.34
SP140-213ENST00000543928 WWC3Q9ULE0 1092 aa17.17■□□□□ 0.34
SP140-213ENST00000543928 NPR1P16066 1061 aa17.16■□□□□ 0.34
SP140-213ENST00000543928 ITPRIPQ8IWB1 547 aa17.16■□□□□ 0.34
SP140-213ENST00000543928 ZNF622Q969S3 477 aaKnown RBP eCLIP17.16■□□□□ 0.34
SP140-213ENST00000543928 MASTLQ96GX5 879 aa17.16■□□□□ 0.34
SP140-213ENST00000543928 PLA2G12BQ9BX93 195 aa17.16■□□□□ 0.34
SP140-213ENST00000543928 DLEC1Q9Y238 1755 aa17.15■□□□□ 0.34
SP140-213ENST00000543928 CTSWP56202 376 aa17.15■□□□□ 0.34
SP140-213ENST00000543928 PDE3AQ14432 1141 aa17.15■□□□□ 0.34
SP140-213ENST00000543928 SF3B3Q15393 1217 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms