RNA–Protein interactions for RNA: ENST00000543770.5

ATP1A3-207, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 2 BASIC

Gene ATP1A3, Length 3,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-207ENST00000543770 HDGFP51858 240 aaKnown RBP12.88□□□□□ -0.35
ATP1A3-207ENST00000543770 FOSBP53539 338 aa12.88□□□□□ -0.35
ATP1A3-207ENST00000543770 MPRIPQ6WCQ1 1025 aa12.88□□□□□ -0.35
ATP1A3-207ENST00000543770 NDUFB9Q9Y6M9 179 aa12.88□□□□□ -0.35
ATP1A3-207ENST00000543770 TNRQ92752 1358 aa12.88□□□□□ -0.35
ATP1A3-207ENST00000543770 IFIT2P09913 472 aaKnown RBP12.88□□□□□ -0.35
ATP1A3-207ENST00000543770 NMIQ13287 307 aaPredicted RBP12.88□□□□□ -0.35
ATP1A3-207ENST00000543770 LETM1O95202 739 aaPredicted RBP12.88□□□□□ -0.35
ATP1A3-207ENST00000543770 EIF4A1P60842 406 aaKnown RBP12.88□□□□□ -0.35
ATP1A3-207ENST00000543770 HMGN5P82970 282 aaKnown RBP12.88□□□□□ -0.35
ATP1A3-207ENST00000543770 VPS53Q5VIR6 699 aa12.88□□□□□ -0.35
ATP1A3-207ENST00000543770 CREB3L3Q68CJ9 461 aa12.88□□□□□ -0.35
ATP1A3-207ENST00000543770 MTERF4Q7Z6M4 381 aaKnown RBP12.88□□□□□ -0.35
ATP1A3-207ENST00000543770 DDX11Q96FC9 970 aa12.88□□□□□ -0.35
ATP1A3-207ENST00000543770 ZSWIM6Q9HCJ5 1215 aa12.88□□□□□ -0.35
ATP1A3-207ENST00000543770 DACT1Q9NYF0 836 aa12.88□□□□□ -0.35
ATP1A3-207ENST00000543770 C9orf78Q9NZ63 289 aaPredicted RBP12.88□□□□□ -0.35
ATP1A3-207ENST00000543770 MRVI1Q9Y6F6 885 aa12.88□□□□□ -0.35
ATP1A3-207ENST00000543770 A0A087WWV3 80 aa12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 CCDC192P0DO97 292 aa12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 C16orf45Q96MC5 204 aaPredicted RBP12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 BOLA2Q9H3K6 86 aa12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 ECHDC1Q9NTX5 307 aa12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 ADCY9O60503 1353 aa12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 A0A0D9SFI3 127 aa12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 TYRO3Q06418 890 aa12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 ANO6Q4KMQ2 910 aa12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 DRC7Q8IY82 874 aa12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 LRRC59Q96AG4 307 aaKnown RBP12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 MAP3K2Q9Y2U5 619 aa12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 CCDC171Q6TFL3 1326 aa12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 TTC21AQ8NDW8 1320 aa12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 U2AF2P26368 475 aaKnown RBP eCLIP12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 CEBPZQ03701 1054 aaKnown RBP12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 AIMP1Q12904 312 aaKnown RBP12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 NAA30Q147X3 362 aaPredicted RBP12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 NECTIN1Q15223 517 aa12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 LARP1Q6PKG0 1096 aaKnown RBP12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 CCDC186Q7Z3E2 898 aa12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 NUP62CLQ9H1M0 184 aa12.87□□□□□ -0.35
ATP1A3-207ENST00000543770 TOPAZ1Q8N9V7 1692 aa12.86□□□□□ -0.35
ATP1A3-207ENST00000543770 SETD1BQ9UPS6 1966 aaKnown RBP12.86□□□□□ -0.35
ATP1A3-207ENST00000543770 HTATSF1O43719 755 aaKnown RBP12.86□□□□□ -0.35
ATP1A3-207ENST00000543770 NBPF6Q5VWK0 638 aa12.86□□□□□ -0.35
ATP1A3-207ENST00000543770 SMAP1Q8IYB5 467 aaPredicted RBP12.86□□□□□ -0.35
ATP1A3-207ENST00000543770 NBPF4Q96M43 638 aa12.86□□□□□ -0.35
ATP1A3-207ENST00000543770 RGPD8O14715 1765 aaPredicted RBP12.86□□□□□ -0.35
ATP1A3-207ENST00000543770 JAK2O60674 1132 aa12.85□□□□□ -0.35
ATP1A3-207ENST00000543770 ZKSCAN1P17029 563 aaPredicted RBP12.85□□□□□ -0.35
ATP1A3-207ENST00000543770 MAP3K11Q16584 847 aa12.85□□□□□ -0.35
ATP1A3-207ENST00000543770 EAF2Q96CJ1 260 aaPredicted RBP12.85□□□□□ -0.35
ATP1A3-207ENST00000543770 PPP6R1Q9UPN7 881 aa12.85□□□□□ -0.35
ATP1A3-207ENST00000543770 ZSCAN20P17040 1043 aaPredicted RBP12.85□□□□□ -0.35
ATP1A3-207ENST00000543770 KRT85P78386 507 aa12.85□□□□□ -0.35
ATP1A3-207ENST00000543770 ZNF589Q86UQ0 364 aaPredicted RBP12.85□□□□□ -0.35
ATP1A3-207ENST00000543770 RUFY2Q8WXA3 655 aa12.85□□□□□ -0.35
ATP1A3-207ENST00000543770 SLC27A2O14975 620 aa12.85□□□□□ -0.35
ATP1A3-207ENST00000543770 GTF2F1P35269 517 aaKnown RBP eCLIP12.85□□□□□ -0.35
ATP1A3-207ENST00000543770 TNMDQ9H2S6 317 aa12.85□□□□□ -0.35
ATP1A3-207ENST00000543770 CBX8Q9HC52 389 aa12.85□□□□□ -0.35
ATP1A3-207ENST00000543770 LRRC37A3O60309 1634 aa12.85□□□□□ -0.35
ATP1A3-207ENST00000543770 NWD1Q149M9 1564 aa12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 BTBD11A6QL63 1104 aa12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 NR1I2O75469 434 aa12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 FAM200AQ8TCP9 573 aa12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 PIK3C2AO00443 1686 aa12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 GOLGA6L4A6NEF3 574 aa12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 TRHP20396 242 aaPredicted RBP12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 PDCL2Q8N4E4 241 aa12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 FSD1Q9BTV5 496 aa12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 LRRC2Q9BYS8 371 aa12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 DNAJC25Q9H1X3 360 aa12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 PXDNLA1KZ92 1463 aa12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 AGLP35573 1532 aa12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 TTC41PQ6P2S7 1318 aa12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 SASH1O94885 1247 aa12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 GTF2E1P29083 439 aaPredicted RBP12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 FBXW7Q969H0 707 aa12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 SPATA32Q96LK8 384 aa12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 TRIM5Q9C035 493 aa12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 SH2B1Q9NRF2 756 aaPredicted RBP12.84□□□□□ -0.35
ATP1A3-207ENST00000543770 EPB41L2O43491 1005 aaKnown RBP12.83□□□□□ -0.36
ATP1A3-207ENST00000543770 TEFQ10587 303 aa12.83□□□□□ -0.36
ATP1A3-207ENST00000543770 ARID5BQ14865 1188 aa12.83□□□□□ -0.36
ATP1A3-207ENST00000543770 SUCLG2Q96I99 432 aa12.83□□□□□ -0.36
ATP1A3-207ENST00000543770 FTOQ9C0B1 505 aaKnown RBP eCLIP12.83□□□□□ -0.36
ATP1A3-207ENST00000543770 CHAF1AQ13111 956 aaPredicted RBP12.83□□□□□ -0.36
ATP1A3-207ENST00000543770 TMEM132AQ24JP5 1023 aa12.83□□□□□ -0.36
ATP1A3-207ENST00000543770 BICD2Q8TD16 824 aa12.83□□□□□ -0.36
ATP1A3-207ENST00000543770 BICC1Q9H694 974 aaKnown RBP12.83□□□□□ -0.36
ATP1A3-207ENST00000543770 TOB2Q14106 344 aaPredicted RBP12.82□□□□□ -0.36
ATP1A3-207ENST00000543770 BLOC1S2Q6QNY1 142 aa12.82□□□□□ -0.36
ATP1A3-207ENST00000543770 ZSCAN31Q96LW9 406 aaPredicted RBP12.82□□□□□ -0.36
ATP1A3-207ENST00000543770 HSP90AB4PQ58FF6 505 aa12.82□□□□□ -0.36
ATP1A3-207ENST00000543770 ZNF530Q6P9A1 599 aaPredicted RBP12.82□□□□□ -0.36
ATP1A3-207ENST00000543770 CCDC129Q6ZRS4 1044 aa12.82□□□□□ -0.36
ATP1A3-207ENST00000543770 ERCC4Q92889 916 aaPredicted RBP12.82□□□□□ -0.36
ATP1A3-207ENST00000543770 EVI5LQ96CN4 794 aa12.82□□□□□ -0.36
ATP1A3-207ENST00000543770 KAZALD1Q96I82 304 aa12.82□□□□□ -0.36
ATP1A3-207ENST00000543770 DIP2BQ9P265 1576 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms