RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 USP42Q9H9J4 1324 aaKnown RBP6.81□□□□□ -1.32
NPIPB4-219ENST00000543660 MYH14Q7Z406 1995 aaKnown RBP6.81□□□□□ -1.32
NPIPB4-219ENST00000543660 CCDC85CA6NKD9 419 aa6.81□□□□□ -1.32
NPIPB4-219ENST00000543660 BHMG1C9JSJ3 638 aaPredicted RBP6.81□□□□□ -1.32
NPIPB4-219ENST00000543660 FYB1O15117 783 aa6.81□□□□□ -1.32
NPIPB4-219ENST00000543660 PHKG2P15735 406 aa6.81□□□□□ -1.32
NPIPB4-219ENST00000543660 DSG2Q14126 1118 aa6.81□□□□□ -1.32
NPIPB4-219ENST00000543660 ZMYND15Q9H091 742 aa6.81□□□□□ -1.32
NPIPB4-219ENST00000543660 SPG7Q9UQ90 795 aa6.81□□□□□ -1.32
NPIPB4-219ENST00000543660 GOLGA8CPA6NN73 597 aa6.8□□□□□ -1.32
NPIPB4-219ENST00000543660 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.8□□□□□ -1.32
NPIPB4-219ENST00000543660 GGNBP2Q9H3C7 697 aa6.8□□□□□ -1.32
NPIPB4-219ENST00000543660 ZNF831Q5JPB2 1677 aa6.8□□□□□ -1.32
NPIPB4-219ENST00000543660 FLT4P35916 1363 aa6.8□□□□□ -1.32
NPIPB4-219ENST00000543660 KIF24Q5T7B8 1368 aa6.8□□□□□ -1.32
NPIPB4-219ENST00000543660 TONSLQ96HA7 1378 aa6.8□□□□□ -1.32
NPIPB4-219ENST00000543660 COL5A3P25940 1745 aaPredicted RBP6.79□□□□□ -1.32
NPIPB4-219ENST00000543660 VIRMAQ69YN4 1812 aaKnown RBP6.79□□□□□ -1.32
NPIPB4-219ENST00000543660 TMEM88BA6NKF7 163 aa6.79□□□□□ -1.32
NPIPB4-219ENST00000543660 ITGBL1O95965 494 aaPredicted RBP6.79□□□□□ -1.32
NPIPB4-219ENST00000543660 IFNL2Q8IZJ0 200 aa6.79□□□□□ -1.32
NPIPB4-219ENST00000543660 TTLL6Q8N841 843 aa6.79□□□□□ -1.32
NPIPB4-219ENST00000543660 ZNF454Q8N9F8 522 aa6.79□□□□□ -1.32
NPIPB4-219ENST00000543660 OXER1Q8TDS5 423 aa6.79□□□□□ -1.32
NPIPB4-219ENST00000543660 CCDC88AQ3V6T2 1871 aa6.79□□□□□ -1.32
NPIPB4-219ENST00000543660 TIAM2Q8IVF5 1701 aa6.79□□□□□ -1.32
NPIPB4-219ENST00000543660 RASSF10A6NK89 507 aa6.78□□□□□ -1.32
NPIPB4-219ENST00000543660 ERVV-2B6SEH9 535 aa6.78□□□□□ -1.32
NPIPB4-219ENST00000543660 DDNO94850 711 aaPredicted RBP6.78□□□□□ -1.32
NPIPB4-219ENST00000543660 PDIA4P13667 645 aaKnown RBP6.78□□□□□ -1.32
NPIPB4-219ENST00000543660 PTPREP23469 700 aa6.78□□□□□ -1.32
NPIPB4-219ENST00000543660 CRKLP46109 303 aaKnown RBP6.78□□□□□ -1.32
NPIPB4-219ENST00000543660 MAP2K1Q02750 393 aaPredicted RBP6.78□□□□□ -1.32
NPIPB4-219ENST00000543660 ERFEQ4G0M1 354 aa6.78□□□□□ -1.32
NPIPB4-219ENST00000543660 MRPL50Q8N5N7 158 aaKnown RBP6.78□□□□□ -1.32
NPIPB4-219ENST00000543660 WNT2BQ93097 391 aa6.78□□□□□ -1.32
NPIPB4-219ENST00000543660 EYA1Q99502 592 aa6.78□□□□□ -1.32
NPIPB4-219ENST00000543660 NFIXQ14938 502 aa6.77□□□□□ -1.33
NPIPB4-219ENST00000543660 DEFB115Q30KQ5 88 aa6.77□□□□□ -1.33
NPIPB4-219ENST00000543660 USPL1Q5W0Q7 1092 aa6.77□□□□□ -1.33
NPIPB4-219ENST00000543660 INTS5Q6P9B9 1019 aaKnown RBP6.77□□□□□ -1.33
NPIPB4-219ENST00000543660 LDHDQ86WU2 507 aa6.77□□□□□ -1.33
NPIPB4-219ENST00000543660 TESK2Q96S53 571 aa6.77□□□□□ -1.33
NPIPB4-219ENST00000543660 ZBED2Q9BTP6 218 aa6.77□□□□□ -1.33
NPIPB4-219ENST00000543660 CARD11Q9BXL7 1154 aa6.77□□□□□ -1.33
NPIPB4-219ENST00000543660 NBPF3Q9H094 633 aa6.77□□□□□ -1.33
NPIPB4-219ENST00000543660 EMILIN1Q9Y6C2 1016 aa6.77□□□□□ -1.33
NPIPB4-219ENST00000543660 ADAMTS7Q9UKP4 1686 aa6.77□□□□□ -1.33
NPIPB4-219ENST00000543660 WDR33Q9C0J8 1336 aaKnown RBP6.76□□□□□ -1.33
NPIPB4-219ENST00000543660 PTCD1O75127 700 aaKnown RBP6.76□□□□□ -1.33
NPIPB4-219ENST00000543660 FOSBP53539 338 aa6.76□□□□□ -1.33
NPIPB4-219ENST00000543660 C2CD5Q86YS7 1000 aa6.76□□□□□ -1.33
NPIPB4-219ENST00000543660 SIN3AQ96ST3 1273 aa6.76□□□□□ -1.33
NPIPB4-219ENST00000543660 TAF1DQ9H5J8 278 aaPredicted RBP6.76□□□□□ -1.33
NPIPB4-219ENST00000543660 WDR70Q9NW82 654 aa6.76□□□□□ -1.33
NPIPB4-219ENST00000543660 NRXN2Q9P2S2 1712 aa6.76□□□□□ -1.33
NPIPB4-219ENST00000543660 LTBP3Q9NS15 1303 aa6.76□□□□□ -1.33
NPIPB4-219ENST00000543660 DLEC1Q9Y238 1755 aa6.75□□□□□ -1.33
NPIPB4-219ENST00000543660 CARMIL3Q8ND23 1372 aa6.75□□□□□ -1.33
NPIPB4-219ENST00000543660 IQCA1LA6NCM1 817 aa6.75□□□□□ -1.33
NPIPB4-219ENST00000543660 H0YIN7 160 aa6.75□□□□□ -1.33
NPIPB4-219ENST00000543660 C21orf2O43822 256 aa6.75□□□□□ -1.33
NPIPB4-219ENST00000543660 ZPR1O75312 459 aa6.75□□□□□ -1.33
NPIPB4-219ENST00000543660 SERPINB2P05120 415 aa6.75□□□□□ -1.33
NPIPB4-219ENST00000543660 ARID3AQ99856 593 aa6.75□□□□□ -1.33
NPIPB4-219ENST00000543660 DICER1Q9UPY3 1922 aaKnown RBP6.75□□□□□ -1.33
NPIPB4-219ENST00000543660 AFDNP55196 1824 aaKnown RBP6.75□□□□□ -1.33
NPIPB4-219ENST00000543660 WASHC2AQ641Q2 1341 aa6.75□□□□□ -1.33
NPIPB4-219ENST00000543660 GTPBP6O43824 516 aaPredicted RBP6.74□□□□□ -1.33
NPIPB4-219ENST00000543660 CABP4P57796 275 aa6.74□□□□□ -1.33
NPIPB4-219ENST00000543660 MCOLN1Q9GZU1 580 aa6.74□□□□□ -1.33
NPIPB4-219ENST00000543660 NARFQ9UHQ1 456 aa6.74□□□□□ -1.33
NPIPB4-219ENST00000543660 FER1L6Q2WGJ9 1857 aa6.74□□□□□ -1.33
NPIPB4-219ENST00000543660 SOS1Q07889 1333 aaPredicted RBP6.74□□□□□ -1.33
NPIPB4-219ENST00000543660 ST20-MTHFSA0A0A6YYL1 179 aa6.73□□□□□ -1.33
NPIPB4-219ENST00000543660 PPM1GO15355 546 aaPredicted RBP6.73□□□□□ -1.33
NPIPB4-219ENST00000543660 HSP90AB1P08238 724 aaKnown RBP6.73□□□□□ -1.33
NPIPB4-219ENST00000543660 NEUROD1Q13562 356 aa6.73□□□□□ -1.33
NPIPB4-219ENST00000543660 EAPPQ56P03 285 aaPredicted RBP6.73□□□□□ -1.33
NPIPB4-219ENST00000543660 MAP1SQ66K74 1059 aaPredicted RBP6.73□□□□□ -1.33
NPIPB4-219ENST00000543660 CNTROBQ8N137 903 aa6.73□□□□□ -1.33
NPIPB4-219ENST00000543660 NFATC2IPQ8NCF5 419 aa6.73□□□□□ -1.33
NPIPB4-219ENST00000543660 TAOK3Q9H2K8 898 aa6.73□□□□□ -1.33
NPIPB4-219ENST00000543660 ABT1Q9ULW3 272 aaKnown RBP6.73□□□□□ -1.33
NPIPB4-219ENST00000543660 SCN4AP35499 1836 aa6.73□□□□□ -1.33
NPIPB4-219ENST00000543660 ADAMTSL1Q8N6G6 1762 aa6.72□□□□□ -1.33
NPIPB4-219ENST00000543660 CYP19A1P11511 503 aaPredicted RBP6.72□□□□□ -1.33
NPIPB4-219ENST00000543660 DNAJC10Q8IXB1 793 aa6.72□□□□□ -1.33
NPIPB4-219ENST00000543660 ZNF622Q969S3 477 aaKnown RBP eCLIP6.72□□□□□ -1.33
NPIPB4-219ENST00000543660 CAPNS2Q96L46 248 aa6.72□□□□□ -1.33
NPIPB4-219ENST00000543660 GPR101Q96P66 508 aaPredicted RBP6.72□□□□□ -1.33
NPIPB4-219ENST00000543660 BEGAINQ9BUH8 593 aa6.72□□□□□ -1.33
NPIPB4-219ENST00000543660 BRIP1Q9BX63 1249 aa6.72□□□□□ -1.33
NPIPB4-219ENST00000543660 CARD14Q9BXL6 1004 aa6.72□□□□□ -1.33
NPIPB4-219ENST00000543660 TSKSQ9UJT2 592 aa6.72□□□□□ -1.33
NPIPB4-219ENST00000543660 TJP1Q07157 1748 aa6.72□□□□□ -1.33
NPIPB4-219ENST00000543660 THSD7BQ9C0I4 1608 aa6.72□□□□□ -1.33
NPIPB4-219ENST00000543660 EPHX2P34913 555 aa6.71□□□□□ -1.34
NPIPB4-219ENST00000543660 FMR1Q06787 632 aaKnown RBP eCLIP6.71□□□□□ -1.34
NPIPB4-219ENST00000543660 EIF4A2Q14240 407 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms