RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 ZC3H4Q9UPT8 1303 aaKnown RBP24.16■■□□□ 1.46
TMED3-204ENST00000543455 SNED1Q8TER0 1413 aa24.16■■□□□ 1.46
TMED3-204ENST00000543455 ELL2O00472 640 aaPredicted RBP24.16■■□□□ 1.46
TMED3-204ENST00000543455 NLRP10Q86W26 655 aa24.16■■□□□ 1.46
TMED3-204ENST00000543455 TCIRG1Q13488 830 aa24.15■■□□□ 1.46
TMED3-204ENST00000543455 PPP1R42Q7Z4L9 355 aa24.15■■□□□ 1.46
TMED3-204ENST00000543455 SLC51AQ86UW1 340 aa24.14■■□□□ 1.46
TMED3-204ENST00000543455 TSPYL6Q8N831 410 aa24.14■■□□□ 1.46
TMED3-204ENST00000543455 TSR2Q969E8 191 aaKnown RBP24.14■■□□□ 1.46
TMED3-204ENST00000543455 TAOK3Q9H2K8 898 aa24.14■■□□□ 1.46
TMED3-204ENST00000543455 HOXA10P31260 410 aaPredicted RBP24.13■■□□□ 1.45
TMED3-204ENST00000543455 SYNE4Q8N205 404 aa24.13■■□□□ 1.45
TMED3-204ENST00000543455 PLBD2Q8NHP8 589 aa24.13■■□□□ 1.45
TMED3-204ENST00000543455 UTP14AQ9BVJ6 771 aaKnown RBP24.13■■□□□ 1.45
TMED3-204ENST00000543455 HSP90AB3PQ58FF7 597 aa24.13■■□□□ 1.45
TMED3-204ENST00000543455 SLC10A5Q5PT55 438 aa24.13■■□□□ 1.45
TMED3-204ENST00000543455 SOGA3Q5TF21 947 aa24.13■■□□□ 1.45
TMED3-204ENST00000543455 HYPKQ9NX55 129 aa24.13■■□□□ 1.45
TMED3-204ENST00000543455 ALDH1B1P30837 517 aa24.12■■□□□ 1.45
TMED3-204ENST00000543455 NCBP3Q53F19 620 aaKnown RBP24.12■■□□□ 1.45
TMED3-204ENST00000543455 CCDC93Q567U6 631 aa24.12■■□□□ 1.45
TMED3-204ENST00000543455 ANKRD13DQ6ZTN6 518 aa24.12■■□□□ 1.45
TMED3-204ENST00000543455 ZNF428Q96B54 188 aa24.11■■□□□ 1.45
TMED3-204ENST00000543455 ISCA1Q9BUE6 129 aa24.11■■□□□ 1.45
TMED3-204ENST00000543455 PHAXQ9H814 394 aaKnown RBP24.11■■□□□ 1.45
TMED3-204ENST00000543455 DDX60Q8IY21 1712 aaKnown RBP24.11■■□□□ 1.45
TMED3-204ENST00000543455 KDM2BQ8NHM5 1336 aa24.11■■□□□ 1.45
TMED3-204ENST00000543455 GLTPD2A6NH11 291 aa24.1■■□□□ 1.45
TMED3-204ENST00000543455 RRAGCQ9HB90 399 aa24.1■■□□□ 1.45
TMED3-204ENST00000543455 RNF123Q5XPI4 1314 aa24.1■■□□□ 1.45
TMED3-204ENST00000543455 RPGRQ92834 1020 aaKnown RBP24.08■■□□□ 1.45
TMED3-204ENST00000543455 CRAMP1Q96RY5 1269 aa24.08■■□□□ 1.45
TMED3-204ENST00000543455 IL16Q14005 1332 aa24.08■■□□□ 1.45
TMED3-204ENST00000543455 CEP350Q5VT06 3117 aa24.08■■□□□ 1.44
TMED3-204ENST00000543455 WDR90Q96KV7 1748 aa24.07■■□□□ 1.44
TMED3-204ENST00000543455 TOMM70O94826 608 aa24.07■■□□□ 1.44
TMED3-204ENST00000543455 HCLS1P14317 486 aaPredicted RBP24.07■■□□□ 1.44
TMED3-204ENST00000543455 FKBP4Q02790 459 aaKnown RBP eCLIP24.07■■□□□ 1.44
TMED3-204ENST00000543455 TAF1P21675 1872 aa24.07■■□□□ 1.44
TMED3-204ENST00000543455 ATP5J2-PTCD1G3V325 749 aa24.07■■□□□ 1.44
TMED3-204ENST00000543455 NLRP3Q96P20 1036 aa24.07■■□□□ 1.44
TMED3-204ENST00000543455 TRMT112Q9UI30 125 aaKnown RBP24.07■■□□□ 1.44
TMED3-204ENST00000543455 POTECB2RU33 542 aa24.06■■□□□ 1.44
TMED3-204ENST00000543455 RBM17Q96I25 401 aaKnown RBP24.06■■□□□ 1.44
TMED3-204ENST00000543455 ZNF277Q9NRM2 450 aaPredicted RBP24.06■■□□□ 1.44
TMED3-204ENST00000543455 SALL2Q9Y467 1007 aaPredicted RBP24.06■■□□□ 1.44
TMED3-204ENST00000543455 RTKN2Q8IZC4 609 aa24.05■■□□□ 1.44
TMED3-204ENST00000543455 SH3TC1Q8TE82 1336 aa24.05■■□□□ 1.44
TMED3-204ENST00000543455 COL4A5P29400 1685 aa24.04■■□□□ 1.44
TMED3-204ENST00000543455 CCDC30Q5VVM6 783 aa24.04■■□□□ 1.44
TMED3-204ENST00000543455 FAM9BQ8IZU0 186 aa24.04■■□□□ 1.44
TMED3-204ENST00000543455 ABCC4O15439 1325 aa24.04■■□□□ 1.44
TMED3-204ENST00000543455 HSPA6P17066 643 aa24.03■■□□□ 1.44
TMED3-204ENST00000543455 TRIM28Q13263 835 aaKnown RBP24.03■■□□□ 1.44
TMED3-204ENST00000543455 DIEXFQ68CQ4 756 aaKnown RBP24.03■■□□□ 1.44
TMED3-204ENST00000543455 FANCIQ9NVI1 1328 aa24.03■■□□□ 1.44
TMED3-204ENST00000543455 COL4A1P02462 1669 aa24.03■■□□□ 1.44
TMED3-204ENST00000543455 RBM46Q8TBY0 533 aaKnown RBP24.02■■□□□ 1.44
TMED3-204ENST00000543455 FAM89AQ96GI7 184 aa24.02■■□□□ 1.44
TMED3-204ENST00000543455 SPINK5Q9NQ38 1064 aaPredicted RBP24.02■■□□□ 1.44
TMED3-204ENST00000543455 TCERG1O14776 1098 aaKnown RBP24.01■■□□□ 1.43
TMED3-204ENST00000543455 PPEF1O14829 653 aaPredicted RBP24.01■■□□□ 1.43
TMED3-204ENST00000543455 GOLGA2Q08379 1002 aa24.01■■□□□ 1.43
TMED3-204ENST00000543455 PSMD1Q99460 953 aa24.01■■□□□ 1.43
TMED3-204ENST00000543455 TWISTNBQ3B726 338 aaPredicted RBP24■■□□□ 1.43
TMED3-204ENST00000543455 CC2D2BQ6DHV5 1058 aa24■■□□□ 1.43
TMED3-204ENST00000543455 RIC3Q7Z5B4 369 aa24■■□□□ 1.43
TMED3-204ENST00000543455 WDR63Q8IWG1 891 aa24■■□□□ 1.43
TMED3-204ENST00000543455 DDNO94850 711 aaPredicted RBP24■■□□□ 1.43
TMED3-204ENST00000543455 IARSP41252 1262 aaKnown RBP24■■□□□ 1.43
TMED3-204ENST00000543455 ZNF541Q9H0D2 1346 aa23.99■■□□□ 1.43
TMED3-204ENST00000543455 VEGFAP15692 232 aaPredicted RBP23.99■■□□□ 1.43
TMED3-204ENST00000543455 MYD88Q99836 296 aa23.99■■□□□ 1.43
TMED3-204ENST00000543455 RTL5Q5HYW3 569 aaPredicted RBP23.98■■□□□ 1.43
TMED3-204ENST00000543455 DPY19L2Q6NUT2 758 aa23.98■■□□□ 1.43
TMED3-204ENST00000543455 G2E3Q7L622 706 aa23.98■■□□□ 1.43
TMED3-204ENST00000543455 C16orf71Q8IYS4 520 aaPredicted RBP23.97■■□□□ 1.43
TMED3-204ENST00000543455 ATP6V0A2Q9Y487 856 aa23.97■■□□□ 1.43
TMED3-204ENST00000543455 LRRC37AA6NMS7 1700 aa23.97■■□□□ 1.43
TMED3-204ENST00000543455 METTL22Q9BUU2 404 aaPredicted RBP23.96■■□□□ 1.43
TMED3-204ENST00000543455 SF3B3Q15393 1217 aaKnown RBP23.95■■□□□ 1.42
TMED3-204ENST00000543455 CHMP4AQ9BY43 222 aa23.95■■□□□ 1.42
TMED3-204ENST00000543455 CACNA1FO60840 1977 aa23.95■■□□□ 1.42
TMED3-204ENST00000543455 FZD9O00144 591 aa23.94■■□□□ 1.42
TMED3-204ENST00000543455 VAMP4O75379 141 aa23.94■■□□□ 1.42
TMED3-204ENST00000543455 GRAPQ13588 217 aa23.94■■□□□ 1.42
TMED3-204ENST00000543455 GRAPLQ8TC17 118 aaPredicted RBP23.94■■□□□ 1.42
TMED3-204ENST00000543455 MAP3K2Q9Y2U5 619 aa23.94■■□□□ 1.42
TMED3-204ENST00000543455 ZNF521Q96K83 1311 aa23.94■■□□□ 1.42
TMED3-204ENST00000543455 PI4KAP2A4QPH2 592 aa23.94■■□□□ 1.42
TMED3-204ENST00000543455 IRS4O14654 1257 aaPredicted RBP23.94■■□□□ 1.42
TMED3-204ENST00000543455 BBOX1O75936 387 aa23.94■■□□□ 1.42
TMED3-204ENST00000543455 EXOSC9Q06265 439 aaKnown RBP23.94■■□□□ 1.42
TMED3-204ENST00000543455 FSTL1Q12841 308 aa23.94■■□□□ 1.42
TMED3-204ENST00000543455 GRIPAP1Q4V328 841 aa23.94■■□□□ 1.42
TMED3-204ENST00000543455 KSR2Q6VAB6 950 aa23.94■■□□□ 1.42
TMED3-204ENST00000543455 DDX46Q7L014 1031 aaKnown RBP23.94■■□□□ 1.42
TMED3-204ENST00000543455 PI4KAP1Q8N8J0 262 aa23.94■■□□□ 1.42
TMED3-204ENST00000543455 ZBTB38Q8NAP3 1195 aaPredicted RBP23.94■■□□□ 1.42
TMED3-204ENST00000543455 CCDC191Q8NCU4 936 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms