RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-213ENST00000543324 ZNF277Q9NRM2 450 aaPredicted RBP8.88□□□□□ -0.99
CIT-213ENST00000543324 ATG3Q9NT62 314 aa8.88□□□□□ -0.99
CIT-213ENST00000543324 FBLN1P23142 703 aa8.87□□□□□ -0.99
CIT-213ENST00000543324 PRPF40BQ6NWY9 871 aaKnown RBP8.87□□□□□ -0.99
CIT-213ENST00000543324 DPF3Q92784 378 aa8.87□□□□□ -0.99
CIT-213ENST00000543324 P2RX7Q99572 595 aaKnown RBP8.87□□□□□ -0.99
CIT-213ENST00000543324 TMOD3Q9NYL9 352 aa8.87□□□□□ -0.99
CIT-213ENST00000543324 GJA3Q9Y6H8 435 aa8.87□□□□□ -0.99
CIT-213ENST00000543324 MUC6Q6W4X9 2439 aa8.86□□□□□ -0.99
CIT-213ENST00000543324 COL4A5P29400 1685 aa8.86□□□□□ -0.99
CIT-213ENST00000543324 NKX1-1Q15270 411 aaPredicted RBP8.86□□□□□ -0.99
CIT-213ENST00000543324 CCDC93Q567U6 631 aa8.86□□□□□ -0.99
CIT-213ENST00000543324 CDC37L1Q7L3B6 337 aa8.86□□□□□ -0.99
CIT-213ENST00000543324 OTOP1Q7RTM1 612 aa8.86□□□□□ -0.99
CIT-213ENST00000543324 C7orf43Q8WVR3 580 aa8.86□□□□□ -0.99
CIT-213ENST00000543324 RAPGEF4Q8WZA2 1011 aa8.86□□□□□ -0.99
CIT-213ENST00000543324 GGNBP2Q9H3C7 697 aa8.86□□□□□ -0.99
CIT-213ENST00000543324 ADARB2Q9NS39 739 aaKnown RBP8.86□□□□□ -0.99
CIT-213ENST00000543324 TRIM17Q9Y577 477 aa8.86□□□□□ -0.99
CIT-213ENST00000543324 BDP1A6H8Y1 2624 aa8.85□□□□□ -0.99
CIT-213ENST00000543324 CACNA1GO43497 2377 aa8.85□□□□□ -0.99
CIT-213ENST00000543324 ZBTB7BO15156 539 aaPredicted RBP8.85□□□□□ -0.99
CIT-213ENST00000543324 IARSP41252 1262 aaKnown RBP8.85□□□□□ -0.99
CIT-213ENST00000543324 RRS1Q15050 365 aaKnown RBP8.85□□□□□ -0.99
CIT-213ENST00000543324 USPL1Q5W0Q7 1092 aa8.85□□□□□ -0.99
CIT-213ENST00000543324 CNKSR1Q969H4 720 aa8.85□□□□□ -0.99
CIT-213ENST00000543324 ZNF333Q96JL9 665 aa8.85□□□□□ -0.99
CIT-213ENST00000543324 GUCD1Q96NT3 240 aa8.85□□□□□ -0.99
CIT-213ENST00000543324 GBA2Q9HCG7 927 aaPredicted RBP8.85□□□□□ -0.99
CIT-213ENST00000543324 NCOR1O75376 2440 aa8.84□□□□□ -0.99
CIT-213ENST00000543324 MRC1P22897 1456 aa8.84□□□□□ -0.99
CIT-213ENST00000543324 TATP17735 454 aaPredicted RBP8.84□□□□□ -0.99
CIT-213ENST00000543324 PDE6BP35913 854 aa8.84□□□□□ -0.99
CIT-213ENST00000543324 EIF6P56537 245 aaKnown RBP8.84□□□□□ -0.99
CIT-213ENST00000543324 LRIT3Q3SXY7 679 aa8.84□□□□□ -0.99
CIT-213ENST00000543324 NBPF6Q5VWK0 638 aa8.84□□□□□ -0.99
CIT-213ENST00000543324 RASAL3Q86YV0 1011 aa8.84□□□□□ -0.99
CIT-213ENST00000543324 NBPF4Q96M43 638 aa8.84□□□□□ -0.99
CIT-213ENST00000543324 CFHR5Q9BXR6 569 aa8.84□□□□□ -0.99
CIT-213ENST00000543324 PTPN22Q9Y2R2 807 aa8.84□□□□□ -0.99
CIT-213ENST00000543324 CRKLP46109 303 aaKnown RBP8.83□□□□□ -1
CIT-213ENST00000543324 STYK1Q6J9G0 422 aa8.83□□□□□ -1
CIT-213ENST00000543324 C2orf69Q8N8R5 385 aa8.83□□□□□ -1
CIT-213ENST00000543324 ZC3H15Q8WU90 426 aaKnown RBP8.83□□□□□ -1
CIT-213ENST00000543324 BRIP1Q9BX63 1249 aa8.83□□□□□ -1
CIT-213ENST00000543324 HCN4Q9Y3Q4 1203 aa8.83□□□□□ -1
CIT-213ENST00000543324 WTIPA6NIX2 430 aaPredicted RBP8.82□□□□□ -1
CIT-213ENST00000543324 ZPR1O75312 459 aa8.82□□□□□ -1
CIT-213ENST00000543324 HSPA5P11021 654 aaKnown RBP8.82□□□□□ -1
CIT-213ENST00000543324 AMPHP49418 695 aa8.82□□□□□ -1
CIT-213ENST00000543324 HSP90AB2PQ58FF8 381 aa8.82□□□□□ -1
CIT-213ENST00000543324 USHBP1Q8N6Y0 703 aa8.82□□□□□ -1
CIT-213ENST00000543324 RBM42Q9BTD8 480 aaKnown RBP8.82□□□□□ -1
CIT-213ENST00000543324 GPRC5DQ9NZD1 345 aa8.82□□□□□ -1
CIT-213ENST00000543324 NR2E3Q9Y5X4 410 aa8.82□□□□□ -1
CIT-213ENST00000543324 EMILIN1Q9Y6C2 1016 aa8.82□□□□□ -1
CIT-213ENST00000543324 BAHCC1Q9P281 2608 aa8.82□□□□□ -1
CIT-213ENST00000543324 WASHC2AQ641Q2 1341 aa8.81□□□□□ -1
CIT-213ENST00000543324 TJP1Q07157 1748 aa8.81□□□□□ -1
CIT-213ENST00000543324 DLK2Q6UY11 383 aa8.81□□□□□ -1
CIT-213ENST00000543324 CCER1Q8TC90 406 aaPredicted RBP8.81□□□□□ -1
CIT-213ENST00000543324 JDP2Q8WYK2 163 aa8.81□□□□□ -1
CIT-213ENST00000543324 R3HDMLQ9H3Y0 253 aa8.81□□□□□ -1
CIT-213ENST00000543324 STAP2Q9UGK3 403 aa8.81□□□□□ -1
CIT-213ENST00000543324 CDH23Q9H251 3354 aa8.81□□□□□ -1
CIT-213ENST00000543324 ZNF609O15014 1411 aa8.8□□□□□ -1
CIT-213ENST00000543324 SRGNP10124 158 aa8.8□□□□□ -1
CIT-213ENST00000543324 EIF4G2P78344 907 aaKnown RBP eCLIP8.8□□□□□ -1
CIT-213ENST00000543324 TJAP1Q5JTD0 557 aa8.8□□□□□ -1
CIT-213ENST00000543324 USP48Q86UV5 1035 aa8.8□□□□□ -1
CIT-213ENST00000543324 COL26A1Q96A83 441 aa8.8□□□□□ -1
CIT-213ENST00000543324 BCL2L12Q9HB09 334 aa8.8□□□□□ -1
CIT-213ENST00000543324 KDM3BQ7LBC6 1761 aa8.8□□□□□ -1
CIT-213ENST00000543324 SNED1Q8TER0 1413 aa8.8□□□□□ -1
CIT-213ENST00000543324 BMP8BP34820 402 aa8.79□□□□□ -1
CIT-213ENST00000543324 TM4SF4P48230 202 aa8.79□□□□□ -1
CIT-213ENST00000543324 HIRAP54198 1017 aaPredicted RBP8.79□□□□□ -1
CIT-213ENST00000543324 SLC4A8Q2Y0W8 1093 aa8.79□□□□□ -1
CIT-213ENST00000543324 RTKN2Q8IZC4 609 aa8.79□□□□□ -1
CIT-213ENST00000543324 MASTLQ96GX5 879 aa8.79□□□□□ -1
CIT-213ENST00000543324 HTATIP2Q9BUP3 242 aa8.79□□□□□ -1
CIT-213ENST00000543324 POLKQ9UBT6 870 aa8.79□□□□□ -1
CIT-213ENST00000543324 NARFQ9UHQ1 456 aa8.79□□□□□ -1
CIT-213ENST00000543324 U3KPZ7 1027 aaPredicted RBP8.79□□□□□ -1
CIT-213ENST00000543324 ZNF316A6NFI3 1004 aaPredicted RBP8.78□□□□□ -1
CIT-213ENST00000543324 BCAMP50895 628 aa8.78□□□□□ -1
CIT-213ENST00000543324 OLFM4Q6UX06 510 aa8.78□□□□□ -1
CIT-213ENST00000543324 UBE2Q1Q7Z7E8 422 aa8.78□□□□□ -1
CIT-213ENST00000543324 MAFAQ8NHW3 353 aaPredicted RBP8.78□□□□□ -1
CIT-213ENST00000543324 SHISA4Q96DD7 197 aa8.78□□□□□ -1
CIT-213ENST00000543324 GDF15Q99988 308 aa8.78□□□□□ -1
CIT-213ENST00000543324 SIPA1L3O60292 1781 aaPredicted RBP8.78□□□□□ -1
CIT-213ENST00000543324 UBR2Q8IWV8 1755 aa8.78□□□□□ -1
CIT-213ENST00000543324 IRS2Q9Y4H2 1338 aa8.78□□□□□ -1
CIT-213ENST00000543324 MRE11P49959 708 aa8.77□□□□□ -1.01
CIT-213ENST00000543324 FAM109BQ6ICB4 259 aaPredicted RBP8.77□□□□□ -1.01
CIT-213ENST00000543324 PRR5LQ6MZQ0 368 aa8.77□□□□□ -1.01
CIT-213ENST00000543324 INTS5Q6P9B9 1019 aaKnown RBP8.77□□□□□ -1.01
CIT-213ENST00000543324 C1QTNF1Q9BXJ1 281 aa8.77□□□□□ -1.01
CIT-213ENST00000543324 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms