RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 NCAPD2Q15021 1401 aa19.9■□□□□ 0.78
KDM2B-216ENST00000543025 TCHHQ07283 1943 aa19.9■□□□□ 0.78
KDM2B-216ENST00000543025 LETM1O95202 739 aaPredicted RBP19.9■□□□□ 0.78
KDM2B-216ENST00000543025 F13A1P00488 732 aa19.9■□□□□ 0.78
KDM2B-216ENST00000543025 UBE2HP62256 183 aa19.9■□□□□ 0.78
KDM2B-216ENST00000543025 IFIT2P09913 472 aaKnown RBP19.89■□□□□ 0.77
KDM2B-216ENST00000543025 UVSSAQ2YD98 709 aa19.89■□□□□ 0.77
KDM2B-216ENST00000543025 VPS53Q5VIR6 699 aa19.89■□□□□ 0.77
KDM2B-216ENST00000543025 LARP6Q9BRS8 491 aaKnown RBP19.89■□□□□ 0.77
KDM2B-216ENST00000543025 LRP6O75581 1613 aa19.89■□□□□ 0.77
KDM2B-216ENST00000543025 KSR2Q6VAB6 950 aa19.89■□□□□ 0.77
KDM2B-216ENST00000543025 TM6SF1Q9BZW5 370 aa19.89■□□□□ 0.77
KDM2B-216ENST00000543025 R3HCC1Q9Y3T6 440 aaKnown RBP19.89■□□□□ 0.77
KDM2B-216ENST00000543025 RNMTO43148 476 aaKnown RBP19.88■□□□□ 0.77
KDM2B-216ENST00000543025 PTH1RQ03431 593 aa19.88■□□□□ 0.77
KDM2B-216ENST00000543025 C1orf141Q5JVX7 400 aa19.88■□□□□ 0.77
KDM2B-216ENST00000543025 EVI5LQ96CN4 794 aa19.88■□□□□ 0.77
KDM2B-216ENST00000543025 OVOS2A0A0G2JMS6 1433 aa19.88■□□□□ 0.77
KDM2B-216ENST00000543025 SPATA31A6Q5VVP1 1343 aa19.88■□□□□ 0.77
KDM2B-216ENST00000543025 PTMAP06454 111 aaKnown RBP19.87■□□□□ 0.77
KDM2B-216ENST00000543025 ZSCAN31Q96LW9 406 aaPredicted RBP19.87■□□□□ 0.77
KDM2B-216ENST00000543025 PDRG1Q9NUG6 133 aa19.87■□□□□ 0.77
KDM2B-216ENST00000543025 GIGYF1O75420 1035 aaPredicted RBP19.87■□□□□ 0.77
KDM2B-216ENST00000543025 CPA1P15085 419 aa19.87■□□□□ 0.77
KDM2B-216ENST00000543025 KCNB2Q92953 911 aa19.87■□□□□ 0.77
KDM2B-216ENST00000543025 JAKMIP1Q96N16 626 aaKnown RBP19.87■□□□□ 0.77
KDM2B-216ENST00000543025 ZSWIM6Q9HCJ5 1215 aa19.87■□□□□ 0.77
KDM2B-216ENST00000543025 SH2B1Q9NRF2 756 aaPredicted RBP19.87■□□□□ 0.77
KDM2B-216ENST00000543025 NRAPQ86VF7 1730 aa19.87■□□□□ 0.77
KDM2B-216ENST00000543025 LARGE1O95461 756 aa19.86■□□□□ 0.77
KDM2B-216ENST00000543025 PRPF40BQ6NWY9 871 aaKnown RBP19.86■□□□□ 0.77
KDM2B-216ENST00000543025 PA2G4Q9UQ80 394 aaKnown RBP19.86■□□□□ 0.77
KDM2B-216ENST00000543025 CYP46A1Q9Y6A2 500 aa19.86■□□□□ 0.77
KDM2B-216ENST00000543025 ADCK5Q3MIX3 580 aa19.86■□□□□ 0.77
KDM2B-216ENST00000543025 CCDC83Q8IWF9 413 aa19.86■□□□□ 0.77
KDM2B-216ENST00000543025 HEG1Q9ULI3 1381 aa19.86■□□□□ 0.77
KDM2B-216ENST00000543025 GJB2P29033 226 aa19.85■□□□□ 0.77
KDM2B-216ENST00000543025 ZKSCAN1P17029 563 aaPredicted RBP19.85■□□□□ 0.77
KDM2B-216ENST00000543025 NECTIN1Q15223 517 aa19.85■□□□□ 0.77
KDM2B-216ENST00000543025 PROSER3Q2NL68 480 aa19.85■□□□□ 0.77
KDM2B-216ENST00000543025 CWF19L2Q2TBE0 894 aaKnown RBP19.85■□□□□ 0.77
KDM2B-216ENST00000543025 AACSQ86V21 672 aa19.85■□□□□ 0.77
KDM2B-216ENST00000543025 KLHL34Q8N239 644 aa19.85■□□□□ 0.77
KDM2B-216ENST00000543025 BTG4Q9NY30 223 aa19.85■□□□□ 0.77
KDM2B-216ENST00000543025 NWD2Q9ULI1 1742 aa19.85■□□□□ 0.77
KDM2B-216ENST00000543025 FIBPO43427 364 aa19.84■□□□□ 0.77
KDM2B-216ENST00000543025 CSB-PGBD3P0DP91 1061 aa19.84■□□□□ 0.77
KDM2B-216ENST00000543025 CCDC171Q6TFL3 1326 aa19.84■□□□□ 0.77
KDM2B-216ENST00000543025 HIP1O00291 1037 aa19.84■□□□□ 0.77
KDM2B-216ENST00000543025 WDR17Q8IZU2 1322 aa19.84■□□□□ 0.77
KDM2B-216ENST00000543025 LINS1Q8NG48 757 aa19.83■□□□□ 0.77
KDM2B-216ENST00000543025 GRM8O00222 908 aa19.83■□□□□ 0.76
KDM2B-216ENST00000543025 MTMR6Q9Y217 621 aa19.83■□□□□ 0.76
KDM2B-216ENST00000543025 PDCL3Q9H2J4 239 aa19.82■□□□□ 0.76
KDM2B-216ENST00000543025 STRN4Q9NRL3 753 aa19.82■□□□□ 0.76
KDM2B-216ENST00000543025 NLRP2Q9NX02 1062 aa19.82■□□□□ 0.76
KDM2B-216ENST00000543025 UTYO14607 1347 aa19.82■□□□□ 0.76
KDM2B-216ENST00000543025 DDX58O95786 925 aaKnown RBP19.82■□□□□ 0.76
KDM2B-216ENST00000543025 KIAA2012Q0VF49 1180 aa19.82■□□□□ 0.76
KDM2B-216ENST00000543025 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.82■□□□□ 0.76
KDM2B-216ENST00000543025 USP25Q9UHP3 1055 aa19.81■□□□□ 0.76
KDM2B-216ENST00000543025 RBM8AQ9Y5S9 174 aaKnown RBP19.81■□□□□ 0.76
KDM2B-216ENST00000543025 SLIT2O94813 1529 aa19.81■□□□□ 0.76
KDM2B-216ENST00000543025 G3BP1Q13283 466 aaKnown RBP eCLIP19.81■□□□□ 0.76
KDM2B-216ENST00000543025 FBXO41Q8TF61 875 aa19.81■□□□□ 0.76
KDM2B-216ENST00000543025 SUCLG2Q96I99 432 aa19.81■□□□□ 0.76
KDM2B-216ENST00000543025 PRAMEF22A3QJZ6 481 aa19.8■□□□□ 0.76
KDM2B-216ENST00000543025 SASH1O94885 1247 aa19.8■□□□□ 0.76
KDM2B-216ENST00000543025 HCLS1P14317 486 aaPredicted RBP19.8■□□□□ 0.76
KDM2B-216ENST00000543025 KCNJ4P48050 445 aa19.8■□□□□ 0.76
KDM2B-216ENST00000543025 DNM1Q05193 864 aaKnown RBP19.8■□□□□ 0.76
KDM2B-216ENST00000543025 ME3Q16798 604 aa19.8■□□□□ 0.76
KDM2B-216ENST00000543025 CREB3L3Q68CJ9 461 aa19.8■□□□□ 0.76
KDM2B-216ENST00000543025 MAP4K1Q92918 833 aa19.8■□□□□ 0.76
KDM2B-216ENST00000543025 PDIA4P13667 645 aaKnown RBP19.8■□□□□ 0.76
KDM2B-216ENST00000543025 EVA1CP58658 441 aa19.8■□□□□ 0.76
KDM2B-216ENST00000543025 TPRNQ4KMQ1 711 aa19.8■□□□□ 0.76
KDM2B-216ENST00000543025 LARP1Q6PKG0 1096 aaKnown RBP19.8■□□□□ 0.76
KDM2B-216ENST00000543025 BICC1Q9H694 974 aaKnown RBP19.8■□□□□ 0.76
KDM2B-216ENST00000543025 PSMA5P28066 241 aa19.79■□□□□ 0.76
KDM2B-216ENST00000543025 ST3GAL1Q11201 340 aa19.79■□□□□ 0.76
KDM2B-216ENST00000543025 EAF2Q96CJ1 260 aaPredicted RBP19.79■□□□□ 0.76
KDM2B-216ENST00000543025 KAZALD1Q96I82 304 aa19.79■□□□□ 0.76
KDM2B-216ENST00000543025 SNRKQ9NRH2 765 aa19.79■□□□□ 0.76
KDM2B-216ENST00000543025 UQCRHLA0A096LP55 91 aa19.79■□□□□ 0.76
KDM2B-216ENST00000543025 UQCRHP07919 91 aa19.79■□□□□ 0.76
KDM2B-216ENST00000543025 NMIQ13287 307 aaPredicted RBP19.79■□□□□ 0.76
KDM2B-216ENST00000543025 TOM1L2Q6ZVM7 507 aa19.79■□□□□ 0.76
KDM2B-216ENST00000543025 FAM227BQ96M60 508 aa19.79■□□□□ 0.76
KDM2B-216ENST00000543025 DDX21Q9NR30 783 aaKnown RBP eCLIP19.79■□□□□ 0.76
KDM2B-216ENST00000543025 C8orf37Q96NL8 207 aa19.78■□□□□ 0.76
KDM2B-216ENST00000543025 SIPA1L3O60292 1781 aaPredicted RBP19.78■□□□□ 0.76
KDM2B-216ENST00000543025 VPS37CA5D8V6 355 aaPredicted RBP19.78■□□□□ 0.76
KDM2B-216ENST00000543025 ADCY5O95622 1261 aa19.78■□□□□ 0.76
KDM2B-216ENST00000543025 FUCA2Q9BTY2 467 aa19.78■□□□□ 0.76
KDM2B-216ENST00000543025 CCDC8Q9H0W5 538 aaPredicted RBP19.78■□□□□ 0.76
KDM2B-216ENST00000543025 TPCN1Q9ULQ1 816 aa19.77■□□□□ 0.76
KDM2B-216ENST00000543025 AIMP1Q12904 312 aaKnown RBP19.77■□□□□ 0.76
KDM2B-216ENST00000543025 RNF20Q5VTR2 975 aa19.77■□□□□ 0.76
KDM2B-216ENST00000543025 SASS6Q6UVJ0 657 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms