RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 TMX1Q9H3N1 280 aa15.09■□□□□ 0.01
TNC-212ENST00000542877 TUBB4AP04350 444 aa15.09■□□□□ 0.01
TNC-212ENST00000542877 KIF5BP33176 963 aa15.09■□□□□ 0.01
TNC-212ENST00000542877 SPECC1Q5M775 1068 aa15.09■□□□□ 0.01
TNC-212ENST00000542877 UBA5Q9GZZ9 404 aa15.09■□□□□ 0.01
TNC-212ENST00000542877 RNF187Q5TA31 235 aaPredicted RBP15.09■□□□□ 0.01
TNC-212ENST00000542877 C14orf93Q9H972 538 aaKnown RBP15.09■□□□□ 0.01
TNC-212ENST00000542877 GOPCQ9HD26 462 aa15.09■□□□□ 0.01
TNC-212ENST00000542877 KRT222Q8N1A0 295 aa15.09■□□□□ 0.01
TNC-212ENST00000542877 TRIM21P19474 475 aaKnown RBP15.08■□□□□ 0.01
TNC-212ENST00000542877 HLTFQ14527 1009 aaKnown RBP eCLIP15.08■□□□□ 0
TNC-212ENST00000542877 CRACR2BQ8N4Y2 399 aaPredicted RBP15.08■□□□□ 0
TNC-212ENST00000542877 ESYT1Q9BSJ8 1104 aa15.08■□□□□ 0
TNC-212ENST00000542877 PDE1AP54750 535 aa15.08■□□□□ 0
TNC-212ENST00000542877 USP48Q86UV5 1035 aa15.08■□□□□ 0
TNC-212ENST00000542877 ANKRD44Q8N8A2 993 aa15.08■□□□□ 0
TNC-212ENST00000542877 KCNG4Q8TDN1 519 aa15.08■□□□□ 0
TNC-212ENST00000542877 CCDC175P0C221 793 aa15.08■□□□□ 0
TNC-212ENST00000542877 SYKP43405 635 aa15.08■□□□□ 0
TNC-212ENST00000542877 DNA2P51530 1060 aa15.08■□□□□ 0
TNC-212ENST00000542877 C8orf34Q49A92 452 aa15.08■□□□□ 0
TNC-212ENST00000542877 BCCIPQ9P287 314 aaKnown RBP eCLIP15.08■□□□□ 0
TNC-212ENST00000542877 ZKSCAN5Q9Y2L8 839 aa15.08■□□□□ 0
TNC-212ENST00000542877 PI4KAP2A4QPH2 592 aa15.07■□□□□ 0
TNC-212ENST00000542877 NEBLO76041 1014 aa15.07■□□□□ 0
TNC-212ENST00000542877 CETN1Q12798 172 aa15.07■□□□□ 0
TNC-212ENST00000542877 PI4KAP1Q8N8J0 262 aa15.07■□□□□ 0
TNC-212ENST00000542877 GOLGA6L10A0A0M3HER8 536 aa15.07■□□□□ 0
TNC-212ENST00000542877 CCDC40Q4G0X9 1142 aa15.07■□□□□ 0
TNC-212ENST00000542877 TSHZ3Q63HK5 1081 aa15.07■□□□□ 0
TNC-212ENST00000542877 PHF8Q9UPP1 1060 aa15.07■□□□□ 0
TNC-212ENST00000542877 UBA7P41226 1012 aa15.07■□□□□ 0
TNC-212ENST00000542877 UBASH3AP57075 661 aa15.07■□□□□ 0
TNC-212ENST00000542877 HS1BP3Q53T59 392 aa15.07■□□□□ 0
TNC-212ENST00000542877 CUL5Q93034 780 aa15.07■□□□□ 0
TNC-212ENST00000542877 LRRC27Q9C0I9 530 aa15.07■□□□□ 0
TNC-212ENST00000542877 DNAI2Q9GZS0 605 aa15.07■□□□□ 0
TNC-212ENST00000542877 RMND1Q9NWS8 449 aa15.07■□□□□ 0
TNC-212ENST00000542877 CNPY2Q9Y2B0 182 aa15.07■□□□□ 0
TNC-212ENST00000542877 SPDYE4A6NLX3 237 aa15.07■□□□□ 0
TNC-212ENST00000542877 SKILP12757 684 aa15.07■□□□□ 0
TNC-212ENST00000542877 ANO6Q4KMQ2 910 aa15.07■□□□□ 0
TNC-212ENST00000542877 SLF2Q8IX21 1173 aa15.07■□□□□ 0
TNC-212ENST00000542877 CTAGE1Q96RT6 745 aa15.07■□□□□ 0
TNC-212ENST00000542877 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.07■□□□□ 0
TNC-212ENST00000542877 BMP15O95972 392 aa15.06■□□□□ 0
TNC-212ENST00000542877 NOS1P29475 1434 aa15.06■□□□□ 0
TNC-212ENST00000542877 LMAN1P49257 510 aa15.06■□□□□ 0
TNC-212ENST00000542877 MFSD6Q6ZSS7 791 aa15.06■□□□□ 0
TNC-212ENST00000542877 MICU3Q86XE3 530 aa15.06■□□□□ 0
TNC-212ENST00000542877 CWC25Q9NXE8 425 aaPredicted RBP15.06■□□□□ 0
TNC-212ENST00000542877 BRF1Q92994 677 aa15.06■□□□□ 0
TNC-212ENST00000542877 N4BP3O15049 544 aa15.06■□□□□ 0
TNC-212ENST00000542877 CKAP4Q07065 602 aaKnown RBP15.06■□□□□ 0
TNC-212ENST00000542877 PODXL2Q9NZ53 605 aa15.06■□□□□ 0
TNC-212ENST00000542877 RBM25P49756 843 aaKnown RBP15.06■□□□□ 0
TNC-212ENST00000542877 CCDC96Q2M329 555 aa15.06■□□□□ 0
TNC-212ENST00000542877 CCDC186Q7Z3E2 898 aa15.06■□□□□ 0
TNC-212ENST00000542877 SLC26A6Q9BXS9 759 aa15.06■□□□□ 0
TNC-212ENST00000542877 PANK2Q9BZ23 570 aa15.06■□□□□ 0
TNC-212ENST00000542877 FAM83GA6ND36 823 aa15.05■□□□□ 0
TNC-212ENST00000542877 TMCO5BA8MYB1 307 aa15.05■□□□□ 0
TNC-212ENST00000542877 MRPS27Q92552 414 aaKnown RBP15.05■□□□□ 0
TNC-212ENST00000542877 JADE2Q9NQC1 790 aa15.05■□□□□ 0
TNC-212ENST00000542877 NUTM2BA6NNL0 878 aaPredicted RBP15.05■□□□□ -0
TNC-212ENST00000542877 NUTM2EB1AL46 878 aaPredicted RBP15.05■□□□□ -0
TNC-212ENST00000542877 F13A1P00488 732 aa15.05■□□□□ -0
TNC-212ENST00000542877 HOOK3Q86VS8 718 aa15.05■□□□□ -0
TNC-212ENST00000542877 NUTM2AQ8IVF1 878 aaPredicted RBP15.05■□□□□ -0
TNC-212ENST00000542877 ASXL1Q8IXJ9 1541 aa15.05■□□□□ -0
TNC-212ENST00000542877 PPP4R3AQ6IN85 833 aa15.05■□□□□ -0
TNC-212ENST00000542877 NECAB1Q8N987 351 aa15.05■□□□□ -0
TNC-212ENST00000542877 TEX13AQ9BXU3 409 aaPredicted RBP15.05■□□□□ -0
TNC-212ENST00000542877 ZFYP08048 801 aaPredicted RBP15.05■□□□□ -0
TNC-212ENST00000542877 SPAG1Q07617 926 aa15.05■□□□□ -0
TNC-212ENST00000542877 LDHAL6AQ6ZMR3 332 aa15.05■□□□□ -0
TNC-212ENST00000542877 SRRTQ9BXP5 876 aaKnown RBP15.05■□□□□ -0
TNC-212ENST00000542877 EHMT1Q9H9B1 1298 aa15.05■□□□□ -0
TNC-212ENST00000542877 ZPR1O75312 459 aa15.04■□□□□ -0
TNC-212ENST00000542877 IDEP14735 1019 aa15.04■□□□□ -0
TNC-212ENST00000542877 HAND2P61296 217 aa15.04■□□□□ -0
TNC-212ENST00000542877 IFI16Q16666 785 aaKnown RBP15.04■□□□□ -0
TNC-212ENST00000542877 ISM2Q6H9L7 571 aa15.04■□□□□ -0
TNC-212ENST00000542877 GIGYF2Q6Y7W6 1299 aaKnown RBP15.04■□□□□ -0
TNC-212ENST00000542877 SMC5Q8IY18 1101 aa15.04■□□□□ -0
TNC-212ENST00000542877 MEIS3Q99687 375 aa15.04■□□□□ -0
TNC-212ENST00000542877 ADGRL1O94910 1474 aa15.04■□□□□ -0
TNC-212ENST00000542877 PDE4BQ07343 736 aa15.04■□□□□ -0
TNC-212ENST00000542877 CTNNBL1Q8WYA6 563 aaPredicted RBP15.04■□□□□ -0
TNC-212ENST00000542877 ANKIB1Q9P2G1 1089 aa15.04■□□□□ -0
TNC-212ENST00000542877 RAB3GAP1Q15042 981 aa15.04■□□□□ -0
TNC-212ENST00000542877 ARFGAP3Q9NP61 516 aa15.04■□□□□ -0
TNC-212ENST00000542877 KLF18A0A0U1RQI7 1052 aa15.04■□□□□ -0
TNC-212ENST00000542877 SPECC1LQ69YQ0 1117 aa15.04■□□□□ -0
TNC-212ENST00000542877 UBE3BQ7Z3V4 1068 aa15.04■□□□□ -0
TNC-212ENST00000542877 CCDC144CPQ8IYA2 1237 aa15.04■□□□□ -0
TNC-212ENST00000542877 ZNF830Q96NB3 372 aaPredicted RBP15.04■□□□□ -0
TNC-212ENST00000542877 PLB1Q6P1J6 1458 aa15.03■□□□□ -0
TNC-212ENST00000542877 MAATS1Q7Z4T9 603 aa15.03■□□□□ -0
TNC-212ENST00000542877 RBM8AQ9Y5S9 174 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms