RNA–Protein interactions for RNA: ENST00000542200.2

AP3B2-209, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2 BASIC

Gene AP3B2, Length 3,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-209ENST00000542200 ERBB4Q15303 1308 aa11.82□□□□□ -0.52
AP3B2-209ENST00000542200 USP42Q9H9J4 1324 aaKnown RBP11.82□□□□□ -0.52
AP3B2-209ENST00000542200 LARGE1O95461 756 aa11.82□□□□□ -0.52
AP3B2-209ENST00000542200 HSPA2P54652 639 aa11.82□□□□□ -0.52
AP3B2-209ENST00000542200 KDM6AO15550 1401 aaPredicted RBP11.82□□□□□ -0.52
AP3B2-209ENST00000542200 GADD45BO75293 160 aaPredicted RBP11.82□□□□□ -0.52
AP3B2-209ENST00000542200 TTC14Q96N46 770 aa11.82□□□□□ -0.52
AP3B2-209ENST00000542200 CCDC171Q6TFL3 1326 aa11.82□□□□□ -0.52
AP3B2-209ENST00000542200 USP48Q86UV5 1035 aa11.81□□□□□ -0.52
AP3B2-209ENST00000542200 DNAJC2Q99543 621 aaKnown RBP11.81□□□□□ -0.52
AP3B2-209ENST00000542200 CLCN1P35523 988 aa11.81□□□□□ -0.52
AP3B2-209ENST00000542200 TOM1L2Q6ZVM7 507 aa11.81□□□□□ -0.52
AP3B2-209ENST00000542200 CADPS2Q86UW7 1296 aa11.81□□□□□ -0.52
AP3B2-209ENST00000542200 NECAB1Q8N987 351 aa11.81□□□□□ -0.52
AP3B2-209ENST00000542200 MEGF6O75095 1541 aa11.81□□□□□ -0.52
AP3B2-209ENST00000542200 A0A0D9SFI3 127 aa11.81□□□□□ -0.52
AP3B2-209ENST00000542200 VPS37CA5D8V6 355 aaPredicted RBP11.81□□□□□ -0.52
AP3B2-209ENST00000542200 FIBPO43427 364 aa11.81□□□□□ -0.52
AP3B2-209ENST00000542200 STX6O43752 255 aa11.81□□□□□ -0.52
AP3B2-209ENST00000542200 SYT1P21579 422 aa11.81□□□□□ -0.52
AP3B2-209ENST00000542200 PRDM11Q9NQV5 511 aa11.81□□□□□ -0.52
AP3B2-209ENST00000542200 OVOS2A0A0G2JMS6 1433 aa11.81□□□□□ -0.52
AP3B2-209ENST00000542200 CREB3L3Q68CJ9 461 aa11.8□□□□□ -0.52
AP3B2-209ENST00000542200 CNPY2Q9Y2B0 182 aa11.8□□□□□ -0.52
AP3B2-209ENST00000542200 HIP1O00291 1037 aa11.8□□□□□ -0.52
AP3B2-209ENST00000542200 GJB2P29033 226 aa11.8□□□□□ -0.52
AP3B2-209ENST00000542200 TFCP2Q12800 502 aa11.8□□□□□ -0.52
AP3B2-209ENST00000542200 LRSAM1Q6UWE0 723 aa11.8□□□□□ -0.52
AP3B2-209ENST00000542200 ZNF142P52746 1687 aaPredicted RBP11.8□□□□□ -0.52
AP3B2-209ENST00000542200 SYAP1Q96A49 352 aaPredicted RBP11.8□□□□□ -0.52
AP3B2-209ENST00000542200 RGPD5Q99666 1765 aa11.8□□□□□ -0.52
AP3B2-209ENST00000542200 ZSCAN22P10073 491 aaPredicted RBP11.8□□□□□ -0.52
AP3B2-209ENST00000542200 UTYO14607 1347 aa11.79□□□□□ -0.52
AP3B2-209ENST00000542200 NEUROD6Q96NK8 337 aa11.79□□□□□ -0.52
AP3B2-209ENST00000542200 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.79□□□□□ -0.52
AP3B2-209ENST00000542200 MSNP26038 577 aaKnown RBP11.79□□□□□ -0.52
AP3B2-209ENST00000542200 VPS53Q5VIR6 699 aa11.79□□□□□ -0.52
AP3B2-209ENST00000542200 RNF20Q5VTR2 975 aa11.79□□□□□ -0.52
AP3B2-209ENST00000542200 LMBR1LQ6UX01 489 aa11.79□□□□□ -0.52
AP3B2-209ENST00000542200 IL17RAQ96F46 866 aa11.79□□□□□ -0.52
AP3B2-209ENST00000542200 STRN4Q9NRL3 753 aa11.79□□□□□ -0.52
AP3B2-209ENST00000542200 TUBGCP6Q96RT7 1819 aa11.78□□□□□ -0.52
AP3B2-209ENST00000542200 STK3Q13188 491 aa11.78□□□□□ -0.52
AP3B2-209ENST00000542200 NECTIN1Q15223 517 aa11.78□□□□□ -0.52
AP3B2-209ENST00000542200 N4BP2Q86UW6 1770 aaPredicted RBP11.78□□□□□ -0.52
AP3B2-209ENST00000542200 BLOC1S2Q6QNY1 142 aa11.78□□□□□ -0.52
AP3B2-209ENST00000542200 ZNF589Q86UQ0 364 aaPredicted RBP11.78□□□□□ -0.52
AP3B2-209ENST00000542200 ZBTB3Q9H5J0 574 aa11.78□□□□□ -0.52
AP3B2-209ENST00000542200 ZSWIM6Q9HCJ5 1215 aa11.78□□□□□ -0.52
AP3B2-209ENST00000542200 DBNLQ9UJU6 430 aaKnown RBP11.78□□□□□ -0.52
AP3B2-209ENST00000542200 MST1RQ04912 1400 aa11.78□□□□□ -0.52
AP3B2-209ENST00000542200 SLC27A2O14975 620 aa11.78□□□□□ -0.52
AP3B2-209ENST00000542200 PTPN12Q05209 780 aaKnown RBP11.78□□□□□ -0.52
AP3B2-209ENST00000542200 ME3Q16798 604 aa11.78□□□□□ -0.52
AP3B2-209ENST00000542200 MAP4K1Q92918 833 aa11.78□□□□□ -0.52
AP3B2-209ENST00000542200 RPAP1Q9BWH6 1393 aaPredicted RBP11.77□□□□□ -0.52
AP3B2-209ENST00000542200 PHRF1Q9P1Y6 1649 aaKnown RBP11.77□□□□□ -0.52
AP3B2-209ENST00000542200 CHGBP05060 677 aa11.77□□□□□ -0.52
AP3B2-209ENST00000542200 PSMA5P28066 241 aa11.77□□□□□ -0.52
AP3B2-209ENST00000542200 COL9A3Q14050 684 aaPredicted RBP11.77□□□□□ -0.52
AP3B2-209ENST00000542200 TNNI3KQ59H18 835 aa11.77□□□□□ -0.52
AP3B2-209ENST00000542200 FERMT3Q86UX7 667 aa11.77□□□□□ -0.52
AP3B2-209ENST00000542200 PPP1R9BQ96SB3 815 aa11.77□□□□□ -0.52
AP3B2-209ENST00000542200 DBNDD2Q9BQY9 259 aa11.77□□□□□ -0.52
AP3B2-209ENST00000542200 FPGT-TNNI3KV9GXZ4 949 aa11.77□□□□□ -0.52
AP3B2-209ENST00000542200 F13A1P00488 732 aa11.77□□□□□ -0.53
AP3B2-209ENST00000542200 DDX46Q7L014 1031 aaKnown RBP11.77□□□□□ -0.53
AP3B2-209ENST00000542200 ZSCAN31Q96LW9 406 aaPredicted RBP11.77□□□□□ -0.53
AP3B2-209ENST00000542200 ATP6V1DQ9Y5K8 247 aa11.77□□□□□ -0.53
AP3B2-209ENST00000542200 ADAMTSL3P82987 1691 aa11.77□□□□□ -0.53
AP3B2-209ENST00000542200 A1BGP04217 495 aa11.77□□□□□ -0.53
AP3B2-209ENST00000542200 TSPY26PQ9H489 355 aa11.77□□□□□ -0.53
AP3B2-209ENST00000542200 TAF6LQ9Y6J9 622 aa11.77□□□□□ -0.53
AP3B2-209ENST00000542200 CCDC129Q6ZRS4 1044 aa11.76□□□□□ -0.53
AP3B2-209ENST00000542200 TTLL7Q6ZT98 887 aa11.76□□□□□ -0.53
AP3B2-209ENST00000542200 ZCRB1Q8TBF4 217 aaKnown RBP11.76□□□□□ -0.53
AP3B2-209ENST00000542200 COPRSQ9NQ92 184 aa11.76□□□□□ -0.53
AP3B2-209ENST00000542200 SH2B1Q9NRF2 756 aaPredicted RBP11.76□□□□□ -0.53
AP3B2-209ENST00000542200 TPCN1Q9ULQ1 816 aa11.76□□□□□ -0.53
AP3B2-209ENST00000542200 FGD1P98174 961 aa11.76□□□□□ -0.53
AP3B2-209ENST00000542200 DNM1Q05193 864 aaKnown RBP11.76□□□□□ -0.53
AP3B2-209ENST00000542200 LARP1BQ659C4 914 aaKnown RBP11.76□□□□□ -0.53
AP3B2-209ENST00000542200 SPATA31A3Q5VYP0 1347 aa11.76□□□□□ -0.53
AP3B2-209ENST00000542200 PLBD2Q8NHP8 589 aa11.76□□□□□ -0.53
AP3B2-209ENST00000542200 SEC62Q99442 399 aaKnown RBP11.76□□□□□ -0.53
AP3B2-209ENST00000542200 TM6SF1Q9BZW5 370 aa11.76□□□□□ -0.53
AP3B2-209ENST00000542200 PHF14O94880 888 aa11.75□□□□□ -0.53
AP3B2-209ENST00000542200 PTMAP06454 111 aaKnown RBP11.75□□□□□ -0.53
AP3B2-209ENST00000542200 ZSCAN30Q86W11 494 aa11.75□□□□□ -0.53
AP3B2-209ENST00000542200 TRPM3Q9HCF6 1732 aaPredicted RBP11.75□□□□□ -0.53
AP3B2-209ENST00000542200 PLCB2Q00722 1185 aa11.75□□□□□ -0.53
AP3B2-209ENST00000542200 LRP10Q7Z4F1 713 aa11.75□□□□□ -0.53
AP3B2-209ENST00000542200 CCDC85AQ96PX6 553 aaPredicted RBP11.75□□□□□ -0.53
AP3B2-209ENST00000542200 TNS3Q68CZ2 1445 aa11.75□□□□□ -0.53
AP3B2-209ENST00000542200 NBPF26B4DH59 902 aa11.74□□□□□ -0.53
AP3B2-209ENST00000542200 EVA1CP58658 441 aa11.74□□□□□ -0.53
AP3B2-209ENST00000542200 TIMM10P62072 90 aa11.74□□□□□ -0.53
AP3B2-209ENST00000542200 NBPF14Q5TI25 921 aa11.74□□□□□ -0.53
AP3B2-209ENST00000542200 NBPF10Q6P3W6 841 aaKnown RBP11.74□□□□□ -0.53
AP3B2-209ENST00000542200 NBPF15Q8N660 670 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms