RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 BRD2P25440 801 aaKnown RBP5.93□□□□□ -1.46
USP28-210ENST00000542033 ARSDP51689 593 aa5.93□□□□□ -1.46
USP28-210ENST00000542033 NAA30Q147X3 362 aaPredicted RBP5.93□□□□□ -1.46
USP28-210ENST00000542033 NEDD1Q8NHV4 660 aa5.93□□□□□ -1.46
USP28-210ENST00000542033 IFT43Q96FT9 208 aa5.93□□□□□ -1.46
USP28-210ENST00000542033 STRN4Q9NRL3 753 aa5.93□□□□□ -1.46
USP28-210ENST00000542033 RNF225M0QZC1 329 aaPredicted RBP5.92□□□□□ -1.46
USP28-210ENST00000542033 ARHGEF15O94989 841 aa5.92□□□□□ -1.46
USP28-210ENST00000542033 ARID4AP29374 1257 aaPredicted RBP5.92□□□□□ -1.46
USP28-210ENST00000542033 IDH3AP50213 366 aa5.92□□□□□ -1.46
USP28-210ENST00000542033 MARSP56192 900 aaKnown RBP5.92□□□□□ -1.46
USP28-210ENST00000542033 SPEM2Q0P670 501 aa5.92□□□□□ -1.46
USP28-210ENST00000542033 SFSWAPQ12872 951 aaKnown RBP5.92□□□□□ -1.46
USP28-210ENST00000542033 COX20Q5RI15 118 aa5.92□□□□□ -1.46
USP28-210ENST00000542033 GALNT6Q8NCL4 622 aa5.92□□□□□ -1.46
USP28-210ENST00000542033 C11orf16Q9NQ32 467 aa5.92□□□□□ -1.46
USP28-210ENST00000542033 FAM13BQ9NYF5 915 aa5.92□□□□□ -1.46
USP28-210ENST00000542033 GGA1Q9UJY5 639 aa5.92□□□□□ -1.46
USP28-210ENST00000542033 DNMT3AQ9Y6K1 912 aaPredicted RBP5.92□□□□□ -1.46
USP28-210ENST00000542033 NEURL1BA8MQ27 555 aa5.91□□□□□ -1.46
USP28-210ENST00000542033 MICAL2O94851 1124 aa5.91□□□□□ -1.46
USP28-210ENST00000542033 SCNN1AP37088 669 aa5.91□□□□□ -1.46
USP28-210ENST00000542033 PHLDB3Q6NSJ2 640 aa5.91□□□□□ -1.46
USP28-210ENST00000542033 CAPN12Q6ZSI9 719 aa5.91□□□□□ -1.46
USP28-210ENST00000542033 PODNQ7Z5L7 613 aa5.91□□□□□ -1.46
USP28-210ENST00000542033 SYT9Q86SS6 491 aa5.91□□□□□ -1.46
USP28-210ENST00000542033 ABTB2Q8N961 1025 aa5.91□□□□□ -1.46
USP28-210ENST00000542033 EDARADDQ8WWZ3 215 aa5.91□□□□□ -1.46
USP28-210ENST00000542033 SCARF2Q96GP6 870 aaPredicted RBP5.91□□□□□ -1.46
USP28-210ENST00000542033 PNMA5Q96PV4 448 aa5.91□□□□□ -1.46
USP28-210ENST00000542033 SEPT3Q9UH03 358 aa5.91□□□□□ -1.46
USP28-210ENST00000542033 DMGDHQ9UI17 866 aaKnown RBP5.91□□□□□ -1.46
USP28-210ENST00000542033 LRFN2Q9ULH4 789 aa5.91□□□□□ -1.46
USP28-210ENST00000542033 ADAMTS8Q9UP79 889 aa5.91□□□□□ -1.46
USP28-210ENST00000542033 BCS1LQ9Y276 419 aa5.91□□□□□ -1.46
USP28-210ENST00000542033 SIN3BO75182 1162 aa5.9□□□□□ -1.46
USP28-210ENST00000542033 ABL1P00519 1130 aa5.9□□□□□ -1.46
USP28-210ENST00000542033 AMPD1P23109 780 aa5.9□□□□□ -1.46
USP28-210ENST00000542033 INPP5BP32019 993 aa5.9□□□□□ -1.46
USP28-210ENST00000542033 PCBP4P57723 403 aaKnown RBP5.9□□□□□ -1.46
USP28-210ENST00000542033 TREML1Q86YW5 311 aa5.9□□□□□ -1.46
USP28-210ENST00000542033 CCER1Q8TC90 406 aaPredicted RBP5.9□□□□□ -1.46
USP28-210ENST00000542033 SAP130Q9H0E3 1048 aa5.9□□□□□ -1.46
USP28-210ENST00000542033 PATL2C9JE40 543 aaKnown RBP5.89□□□□□ -1.47
USP28-210ENST00000542033 PIK3R2O00459 728 aa5.89□□□□□ -1.47
USP28-210ENST00000542033 EPXP11678 715 aa5.89□□□□□ -1.47
USP28-210ENST00000542033 ALAS2P22557 587 aa5.89□□□□□ -1.47
USP28-210ENST00000542033 CCINQ13939 588 aa5.89□□□□□ -1.47
USP28-210ENST00000542033 GTF3C2Q8WUA4 911 aaPredicted RBP5.89□□□□□ -1.47
USP28-210ENST00000542033 SLC30A3Q99726 388 aa5.89□□□□□ -1.47
USP28-210ENST00000542033 STIM2Q9P246 746 aa5.89□□□□□ -1.47
USP28-210ENST00000542033 HCN2Q9UL51 889 aa5.89□□□□□ -1.47
USP28-210ENST00000542033 ELOA3CA0A087WX78 387 aaPredicted RBP5.88□□□□□ -1.47
USP28-210ENST00000542033 ELOA3DA6NLF2 546 aaPredicted RBP5.88□□□□□ -1.47
USP28-210ENST00000542033 PHF20L1A8MW92 1017 aa5.88□□□□□ -1.47
USP28-210ENST00000542033 KCNA1Q09470 495 aa5.88□□□□□ -1.47
USP28-210ENST00000542033 ELOA3BQ3SY89 546 aa5.88□□□□□ -1.47
USP28-210ENST00000542033 AEBP1Q8IUX7 1158 aa5.88□□□□□ -1.47
USP28-210ENST00000542033 KCTD17Q8N5Z5 321 aa5.88□□□□□ -1.47
USP28-210ENST00000542033 ELOA3Q8NG57 546 aa5.88□□□□□ -1.47
USP28-210ENST00000542033 HELQQ8TDG4 1101 aa5.88□□□□□ -1.47
USP28-210ENST00000542033 BHMTQ93088 406 aa5.88□□□□□ -1.47
USP28-210ENST00000542033 ADARB2-AS1A8MUL3 147 aa5.87□□□□□ -1.47
USP28-210ENST00000542033 SHISA8B8ZZ34 492 aa5.87□□□□□ -1.47
USP28-210ENST00000542033 TNFRSF10BO14763 440 aa5.87□□□□□ -1.47
USP28-210ENST00000542033 SERPINB4P48594 390 aa5.87□□□□□ -1.47
USP28-210ENST00000542033 PCSK7Q16549 785 aa5.87□□□□□ -1.47
USP28-210ENST00000542033 FCHSD1Q86WN1 690 aa5.87□□□□□ -1.47
USP28-210ENST00000542033 ETFBKMTQ8IXQ9 262 aa5.87□□□□□ -1.47
USP28-210ENST00000542033 BEND7Q8N7W2 519 aaPredicted RBP5.87□□□□□ -1.47
USP28-210ENST00000542033 PIK3R5Q8WYR1 880 aa5.87□□□□□ -1.47
USP28-210ENST00000542033 TNFRSF25Q93038 417 aa5.87□□□□□ -1.47
USP28-210ENST00000542033 GSX2Q9BZM3 304 aa5.87□□□□□ -1.47
USP28-210ENST00000542033 RRAGCQ9HB90 399 aa5.87□□□□□ -1.47
USP28-210ENST00000542033 RTCBQ9Y3I0 505 aaKnown RBP5.87□□□□□ -1.47
USP28-210ENST00000542033 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.87□□□□□ -1.47
USP28-210ENST00000542033 ZNF211Q13398 564 aaPredicted RBP5.86□□□□□ -1.47
USP28-210ENST00000542033 SF3B2Q13435 895 aaKnown RBP5.86□□□□□ -1.47
USP28-210ENST00000542033 GRIN2CQ14957 1233 aa5.86□□□□□ -1.47
USP28-210ENST00000542033 KANK3Q6NY19 840 aa5.86□□□□□ -1.47
USP28-210ENST00000542033 C1orf229Q6ZS94 237 aaPredicted RBP5.86□□□□□ -1.47
USP28-210ENST00000542033 RAB44Q7Z6P3 723 aaPredicted RBP5.86□□□□□ -1.47
USP28-210ENST00000542033 TXNDC2Q86VQ3 553 aa5.86□□□□□ -1.47
USP28-210ENST00000542033 RGL4Q8IZJ4 473 aa5.86□□□□□ -1.47
USP28-210ENST00000542033 CMTR1Q8N1G2 835 aaKnown RBP5.86□□□□□ -1.47
USP28-210ENST00000542033 BTBD6Q96KE9 485 aa5.86□□□□□ -1.47
USP28-210ENST00000542033 ANO2Q9NQ90 1003 aa5.86□□□□□ -1.47
USP28-210ENST00000542033 KLF15Q9UIH9 416 aa5.86□□□□□ -1.47
USP28-210ENST00000542033 MKL2Q9ULH7 1088 aa5.86□□□□□ -1.47
USP28-210ENST00000542033 OPLAHO14841 1288 aa5.85□□□□□ -1.47
USP28-210ENST00000542033 EGFRP00533 1210 aa5.85□□□□□ -1.47
USP28-210ENST00000542033 RPLP1P05386 114 aaKnown RBP5.85□□□□□ -1.47
USP28-210ENST00000542033 NFKB1P19838 968 aa5.85□□□□□ -1.47
USP28-210ENST00000542033 ADH7P40394 386 aa5.85□□□□□ -1.47
USP28-210ENST00000542033 ZAP70P43403 619 aa5.85□□□□□ -1.47
USP28-210ENST00000542033 FKBP4Q02790 459 aaKnown RBP eCLIP5.85□□□□□ -1.47
USP28-210ENST00000542033 KCNMA1Q12791 1236 aa5.85□□□□□ -1.47
USP28-210ENST00000542033 MTMR3Q13615 1198 aa5.85□□□□□ -1.47
USP28-210ENST00000542033 CHSY3Q70JA7 882 aa5.85□□□□□ -1.47
USP28-210ENST00000542033 GLYCTKQ8IVS8 523 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms