RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 MAP3K2Q9Y2U5 619 aa10.99□□□□□ -0.65
THBS3-211ENST00000541990 PDE1AP54750 535 aa10.98□□□□□ -0.65
THBS3-211ENST00000541990 CUL4AQ13619 759 aa10.98□□□□□ -0.65
THBS3-211ENST00000541990 PDIA6Q15084 440 aa10.98□□□□□ -0.65
THBS3-211ENST00000541990 XAGE3Q8WTP9 111 aa10.98□□□□□ -0.65
THBS3-211ENST00000541990 PYCARDQ9ULZ3 195 aa10.98□□□□□ -0.65
THBS3-211ENST00000541990 EXOC6BQ9Y2D4 811 aa10.98□□□□□ -0.65
THBS3-211ENST00000541990 MEX3CQ5U5Q3 659 aaKnown RBP10.98□□□□□ -0.65
THBS3-211ENST00000541990 CNPY2Q9Y2B0 182 aa10.98□□□□□ -0.65
THBS3-211ENST00000541990 PCDH11XQ9BZA7 1347 aa10.98□□□□□ -0.65
THBS3-211ENST00000541990 PCDH11YQ9BZA8 1340 aa10.98□□□□□ -0.65
THBS3-211ENST00000541990 KCNF1Q9H3M0 494 aa10.98□□□□□ -0.65
THBS3-211ENST00000541990 PNMA6EA0A0J9YXQ4 647 aa10.97□□□□□ -0.65
THBS3-211ENST00000541990 U2AF2P26368 475 aaKnown RBP eCLIP10.97□□□□□ -0.65
THBS3-211ENST00000541990 UNC5CLQ8IV45 518 aa10.97□□□□□ -0.65
THBS3-211ENST00000541990 MARCH10Q8NA82 808 aaPredicted RBP10.97□□□□□ -0.65
THBS3-211ENST00000541990 SRCIN1Q9C0H9 1055 aa10.97□□□□□ -0.65
THBS3-211ENST00000541990 ANO2Q9NQ90 1003 aa10.97□□□□□ -0.65
THBS3-211ENST00000541990 TMOD3Q9NYL9 352 aa10.97□□□□□ -0.65
THBS3-211ENST00000541990 LRRFIP2Q9Y608 721 aaKnown RBP10.97□□□□□ -0.65
THBS3-211ENST00000541990 OVOS2A0A0G2JMS6 1433 aa10.97□□□□□ -0.65
THBS3-211ENST00000541990 NCAPD2Q15021 1401 aa10.97□□□□□ -0.65
THBS3-211ENST00000541990 UTP14CQ5TAP6 766 aaKnown RBP10.97□□□□□ -0.65
THBS3-211ENST00000541990 TTLL7Q6ZT98 887 aa10.97□□□□□ -0.65
THBS3-211ENST00000541990 DNAJC10Q8IXB1 793 aa10.97□□□□□ -0.65
THBS3-211ENST00000541990 ESYT1Q9BSJ8 1104 aa10.97□□□□□ -0.65
THBS3-211ENST00000541990 ZBTB3Q9H5J0 574 aa10.97□□□□□ -0.65
THBS3-211ENST00000541990 FAM208AQ9UK61 1670 aaKnown RBP10.97□□□□□ -0.65
THBS3-211ENST00000541990 RPAP1Q9BWH6 1393 aaPredicted RBP10.97□□□□□ -0.65
THBS3-211ENST00000541990 NBPF26B4DH59 902 aa10.96□□□□□ -0.65
THBS3-211ENST00000541990 GTF2F1P35269 517 aaKnown RBP eCLIP10.96□□□□□ -0.65
THBS3-211ENST00000541990 DDB1Q16531 1140 aa10.96□□□□□ -0.65
THBS3-211ENST00000541990 NBPF14Q5TI25 921 aa10.96□□□□□ -0.65
THBS3-211ENST00000541990 NBPF10Q6P3W6 841 aaKnown RBP10.96□□□□□ -0.65
THBS3-211ENST00000541990 RPAP2Q8IXW5 612 aaPredicted RBP10.96□□□□□ -0.65
THBS3-211ENST00000541990 NBPF15Q8N660 670 aa10.96□□□□□ -0.65
THBS3-211ENST00000541990 CRYBG1Q9Y4K1 1723 aa10.96□□□□□ -0.65
THBS3-211ENST00000541990 PRIMPOLQ96LW4 560 aa10.96□□□□□ -0.66
THBS3-211ENST00000541990 SLC4A9Q96Q91 983 aa10.96□□□□□ -0.66
THBS3-211ENST00000541990 USP44Q9H0E7 712 aa10.96□□□□□ -0.66
THBS3-211ENST00000541990 KIF3AQ9Y496 699 aa10.96□□□□□ -0.66
THBS3-211ENST00000541990 NHSL1Q5SYE7 1610 aa10.96□□□□□ -0.66
THBS3-211ENST00000541990 RIOK3O14730 519 aaKnown RBP10.95□□□□□ -0.66
THBS3-211ENST00000541990 HMGN5P82970 282 aaKnown RBP10.95□□□□□ -0.66
THBS3-211ENST00000541990 SPC24Q8NBT2 197 aa10.95□□□□□ -0.66
THBS3-211ENST00000541990 RILPL2Q969X0 211 aa10.95□□□□□ -0.66
THBS3-211ENST00000541990 USP21Q9UK80 565 aa10.95□□□□□ -0.66
THBS3-211ENST00000541990 SPATA31A1Q5TZJ5 1347 aa10.95□□□□□ -0.66
THBS3-211ENST00000541990 GIMAP6Q6P9H5 292 aa10.95□□□□□ -0.66
THBS3-211ENST00000541990 RIC3Q7Z5B4 369 aa10.95□□□□□ -0.66
THBS3-211ENST00000541990 KLHDC4Q8TBB5 520 aa10.95□□□□□ -0.66
THBS3-211ENST00000541990 CCDC85AQ96PX6 553 aaPredicted RBP10.95□□□□□ -0.66
THBS3-211ENST00000541990 SPTLC3Q9NUV7 552 aa10.95□□□□□ -0.66
THBS3-211ENST00000541990 DBF4Q9UBU7 674 aaPredicted RBP10.95□□□□□ -0.66
THBS3-211ENST00000541990 DNAAF4Q8WXU2 420 aa10.95□□□□□ -0.66
THBS3-211ENST00000541990 SYAP1Q96A49 352 aaPredicted RBP10.95□□□□□ -0.66
THBS3-211ENST00000541990 FMNL2Q96PY5 1086 aa10.95□□□□□ -0.66
THBS3-211ENST00000541990 BCL11BQ9C0K0 894 aaPredicted RBP10.95□□□□□ -0.66
THBS3-211ENST00000541990 ATG3Q9NT62 314 aa10.95□□□□□ -0.66
THBS3-211ENST00000541990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.95□□□□□ -0.66
THBS3-211ENST00000541990 PHLPP1O60346 1717 aa10.94□□□□□ -0.66
THBS3-211ENST00000541990 SNRPA1P09661 255 aaKnown RBP10.94□□□□□ -0.66
THBS3-211ENST00000541990 MYD88Q99836 296 aa10.94□□□□□ -0.66
THBS3-211ENST00000541990 TCHHQ07283 1943 aa10.94□□□□□ -0.66
THBS3-211ENST00000541990 ADCY9O60503 1353 aa10.94□□□□□ -0.66
THBS3-211ENST00000541990 FIBPO43427 364 aa10.94□□□□□ -0.66
THBS3-211ENST00000541990 TRIM6-TRIM34B2RNG4 842 aa10.93□□□□□ -0.66
THBS3-211ENST00000541990 MAP4K4O95819 1239 aaPredicted RBP10.93□□□□□ -0.66
THBS3-211ENST00000541990 CHMLP26374 656 aa10.93□□□□□ -0.66
THBS3-211ENST00000541990 CCDC183Q5T5S1 534 aa10.93□□□□□ -0.66
THBS3-211ENST00000541990 PTPRCP08575 1304 aa10.93□□□□□ -0.66
THBS3-211ENST00000541990 SALL3Q9BXA9 1300 aa10.93□□□□□ -0.66
THBS3-211ENST00000541990 SYNE4Q8N205 404 aa10.93□□□□□ -0.66
THBS3-211ENST00000541990 PDCL2Q8N4E4 241 aa10.93□□□□□ -0.66
THBS3-211ENST00000541990 IL1RAPL2Q9NP60 686 aa10.93□□□□□ -0.66
THBS3-211ENST00000541990 PA2G4Q9UQ80 394 aaKnown RBP10.93□□□□□ -0.66
THBS3-211ENST00000541990 LMO7Q8WWI1 1683 aa10.93□□□□□ -0.66
THBS3-211ENST00000541990 KDM4AO75164 1064 aa10.92□□□□□ -0.66
THBS3-211ENST00000541990 CPA1P15085 419 aa10.92□□□□□ -0.66
THBS3-211ENST00000541990 NAA30Q147X3 362 aaPredicted RBP10.92□□□□□ -0.66
THBS3-211ENST00000541990 BEND3Q5T5X7 828 aa10.92□□□□□ -0.66
THBS3-211ENST00000541990 INTS4Q96HW7 963 aaKnown RBP10.92□□□□□ -0.66
THBS3-211ENST00000541990 OSBPL3Q9H4L5 887 aa10.92□□□□□ -0.66
THBS3-211ENST00000541990 COL16A1Q07092 1604 aaPredicted RBP10.92□□□□□ -0.66
THBS3-211ENST00000541990 KIAA1524Q8TCG1 905 aa10.92□□□□□ -0.66
THBS3-211ENST00000541990 FUCA2Q9BTY2 467 aa10.92□□□□□ -0.66
THBS3-211ENST00000541990 ABCA3Q99758 1704 aa10.92□□□□□ -0.66
THBS3-211ENST00000541990 PHF14O94880 888 aa10.91□□□□□ -0.66
THBS3-211ENST00000541990 IGKV5-2P06315 115 aa10.91□□□□□ -0.66
THBS3-211ENST00000541990 MX1P20591 662 aa10.91□□□□□ -0.66
THBS3-211ENST00000541990 DDX21Q9NR30 783 aaKnown RBP eCLIP10.91□□□□□ -0.66
THBS3-211ENST00000541990 TBC1D2BQ9UPU7 963 aa10.91□□□□□ -0.66
THBS3-211ENST00000541990 SPATA31A5Q5VU36 1347 aa10.91□□□□□ -0.66
THBS3-211ENST00000541990 SPATA31A7Q8IWB4 1347 aa10.91□□□□□ -0.66
THBS3-211ENST00000541990 LRP6O75581 1613 aa10.91□□□□□ -0.66
THBS3-211ENST00000541990 LARGE1O95461 756 aa10.91□□□□□ -0.66
THBS3-211ENST00000541990 UBTFL1P0CB47 393 aaPredicted RBP10.91□□□□□ -0.66
THBS3-211ENST00000541990 GPTP24298 496 aa10.91□□□□□ -0.66
THBS3-211ENST00000541990 UVSSAQ2YD98 709 aa10.91□□□□□ -0.66
THBS3-211ENST00000541990 C9orf78Q9NZ63 289 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms