RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 RAD21O60216 631 aa17■□□□□ 0.31
GCFC2-211ENST00000541687 CCDC144CPQ8IYA2 1237 aa17■□□□□ 0.31
GCFC2-211ENST00000541687 HOOK1Q9UJC3 728 aaKnown RBP17■□□□□ 0.31
GCFC2-211ENST00000541687 MNS1Q8NEH6 495 aa17■□□□□ 0.31
GCFC2-211ENST00000541687 PRDM10Q9NQV6 1147 aa17■□□□□ 0.31
GCFC2-211ENST00000541687 HSP90AB3PQ58FF7 597 aa17■□□□□ 0.31
GCFC2-211ENST00000541687 CCDC129Q6ZRS4 1044 aa17■□□□□ 0.31
GCFC2-211ENST00000541687 PIBF1Q8WXW3 757 aa17■□□□□ 0.31
GCFC2-211ENST00000541687 ROBO2Q9HCK4 1378 aa17■□□□□ 0.31
GCFC2-211ENST00000541687 Q6ZUG5 572 aa17■□□□□ 0.31
GCFC2-211ENST00000541687 TFCP2Q12800 502 aa16.99■□□□□ 0.31
GCFC2-211ENST00000541687 SART3Q15020 963 aaKnown RBP16.99■□□□□ 0.31
GCFC2-211ENST00000541687 C8orf76Q96K31 380 aa16.99■□□□□ 0.31
GCFC2-211ENST00000541687 TRMT1Q9NXH9 659 aaKnown RBP16.99■□□□□ 0.31
GCFC2-211ENST00000541687 TTC41PQ6P2S7 1318 aa16.99■□□□□ 0.31
GCFC2-211ENST00000541687 FAM135BQ49AJ0 1406 aa16.99■□□□□ 0.31
GCFC2-211ENST00000541687 EIF4A1P60842 406 aaKnown RBP16.99■□□□□ 0.31
GCFC2-211ENST00000541687 CLASP1Q7Z460 1538 aa16.99■□□□□ 0.31
GCFC2-211ENST00000541687 FSIP1Q8NA03 581 aa16.99■□□□□ 0.31
GCFC2-211ENST00000541687 CLIP2Q9UDT6 1046 aa16.99■□□□□ 0.31
GCFC2-211ENST00000541687 FSD2A1L4K1 749 aa16.98■□□□□ 0.31
GCFC2-211ENST00000541687 MARCH6O60337 910 aa16.98■□□□□ 0.31
GCFC2-211ENST00000541687 IFIT5Q13325 482 aaKnown RBP16.98■□□□□ 0.31
GCFC2-211ENST00000541687 MTERF4Q7Z6M4 381 aaKnown RBP16.98■□□□□ 0.31
GCFC2-211ENST00000541687 ABCF2Q9UG63 623 aa16.98■□□□□ 0.31
GCFC2-211ENST00000541687 CCDC171Q6TFL3 1326 aa16.98■□□□□ 0.31
GCFC2-211ENST00000541687 GOLGA8BA8MQT2 603 aa16.98■□□□□ 0.31
GCFC2-211ENST00000541687 TSR1Q2NL82 804 aaKnown RBP16.98■□□□□ 0.31
GCFC2-211ENST00000541687 SUCLG2Q96I99 432 aa16.98■□□□□ 0.31
GCFC2-211ENST00000541687 TDO2P48775 406 aa16.97■□□□□ 0.31
GCFC2-211ENST00000541687 C17orf53Q8N3J3 647 aaPredicted RBP16.97■□□□□ 0.31
GCFC2-211ENST00000541687 GPT2Q8TD30 523 aa16.97■□□□□ 0.31
GCFC2-211ENST00000541687 CWC25Q9NXE8 425 aaPredicted RBP16.97■□□□□ 0.31
GCFC2-211ENST00000541687 TPM1P09493 284 aa16.97■□□□□ 0.31
GCFC2-211ENST00000541687 ANO6Q4KMQ2 910 aa16.97■□□□□ 0.31
GCFC2-211ENST00000541687 AIDAQ96BJ3 306 aa16.97■□□□□ 0.31
GCFC2-211ENST00000541687 TMOD3Q9NYL9 352 aa16.97■□□□□ 0.31
GCFC2-211ENST00000541687 CCDC69A6NI79 296 aa16.97■□□□□ 0.31
GCFC2-211ENST00000541687 RUFY3Q7L099 469 aa16.97■□□□□ 0.31
GCFC2-211ENST00000541687 RAD50Q92878 1312 aa16.97■□□□□ 0.31
GCFC2-211ENST00000541687 ZNF445P59923 1031 aa16.97■□□□□ 0.31
GCFC2-211ENST00000541687 TIMM10P62072 90 aa16.97■□□□□ 0.31
GCFC2-211ENST00000541687 PCMTD1Q96MG8 357 aaPredicted RBP16.97■□□□□ 0.31
GCFC2-211ENST00000541687 DDX17Q92841 729 aaKnown RBP16.96■□□□□ 0.31
GCFC2-211ENST00000541687 DDX21Q9NR30 783 aaKnown RBP eCLIP16.96■□□□□ 0.31
GCFC2-211ENST00000541687 DDX19AQ9NUU7 478 aaKnown RBP16.96■□□□□ 0.31
GCFC2-211ENST00000541687 AATKQ6ZMQ8 1374 aa16.96■□□□□ 0.31
GCFC2-211ENST00000541687 BRD1O95696 1058 aa16.96■□□□□ 0.31
GCFC2-211ENST00000541687 HSPA4P34932 840 aa16.96■□□□□ 0.31
GCFC2-211ENST00000541687 CCAR1Q8IX12 1150 aaKnown RBP16.96■□□□□ 0.31
GCFC2-211ENST00000541687 DNAJC25Q9H1X3 360 aa16.96■□□□□ 0.31
GCFC2-211ENST00000541687 ZNF213O14771 459 aa16.96■□□□□ 0.31
GCFC2-211ENST00000541687 LDHAL6AQ6ZMR3 332 aa16.96■□□□□ 0.31
GCFC2-211ENST00000541687 USP16Q9Y5T5 823 aa16.96■□□□□ 0.31
GCFC2-211ENST00000541687 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.96■□□□□ 0.31
GCFC2-211ENST00000541687 KAT6BQ8WYB5 2073 aa16.96■□□□□ 0.31
GCFC2-211ENST00000541687 PTH1RQ03431 593 aa16.95■□□□□ 0.3
GCFC2-211ENST00000541687 NOLC1Q14978 699 aaKnown RBP eCLIP16.95■□□□□ 0.3
GCFC2-211ENST00000541687 JMYQ8N9B5 988 aa16.95■□□□□ 0.3
GCFC2-211ENST00000541687 SSH3Q8TE77 659 aa16.95■□□□□ 0.3
GCFC2-211ENST00000541687 VPS53Q5VIR6 699 aa16.95■□□□□ 0.3
GCFC2-211ENST00000541687 CCDC186Q7Z3E2 898 aa16.95■□□□□ 0.3
GCFC2-211ENST00000541687 CBX1P83916 185 aa16.95■□□□□ 0.3
GCFC2-211ENST00000541687 RASEFQ8IZ41 740 aa16.95■□□□□ 0.3
GCFC2-211ENST00000541687 HMG20BQ9P0W2 317 aa16.95■□□□□ 0.3
GCFC2-211ENST00000541687 LRP2BPQ9P2M1 347 aa16.95■□□□□ 0.3
GCFC2-211ENST00000541687 PATL2C9JE40 543 aaKnown RBP16.95■□□□□ 0.3
GCFC2-211ENST00000541687 MCMDC2Q4G0Z9 681 aa16.95■□□□□ 0.3
GCFC2-211ENST00000541687 TRIM22Q8IYM9 498 aa16.95■□□□□ 0.3
GCFC2-211ENST00000541687 DBNDD2Q9BQY9 259 aa16.95■□□□□ 0.3
GCFC2-211ENST00000541687 TRMT112Q9UI30 125 aaKnown RBP16.95■□□□□ 0.3
GCFC2-211ENST00000541687 APOBRQ0VD83 1088 aa16.94■□□□□ 0.3
GCFC2-211ENST00000541687 BICDL1Q6ZP65 573 aa16.94■□□□□ 0.3
GCFC2-211ENST00000541687 LUZP1Q86V48 1076 aa16.94■□□□□ 0.3
GCFC2-211ENST00000541687 MICU3Q86XE3 530 aa16.94■□□□□ 0.3
GCFC2-211ENST00000541687 ORC3Q9UBD5 711 aaPredicted RBP16.94■□□□□ 0.3
GCFC2-211ENST00000541687 HMGB1P09429 215 aaKnown RBP16.94■□□□□ 0.3
GCFC2-211ENST00000541687 GLI2P10070 1586 aa16.94■□□□□ 0.3
GCFC2-211ENST00000541687 PDIA4P13667 645 aaKnown RBP16.94■□□□□ 0.3
GCFC2-211ENST00000541687 PROSER3Q2NL68 480 aa16.94■□□□□ 0.3
GCFC2-211ENST00000541687 ZNF790Q6PG37 636 aa16.94■□□□□ 0.3
GCFC2-211ENST00000541687 PRAMEF22A3QJZ6 481 aa16.94■□□□□ 0.3
GCFC2-211ENST00000541687 STARD3NLO95772 234 aa16.94■□□□□ 0.3
GCFC2-211ENST00000541687 AKAP2Q9Y2D5 859 aa16.94■□□□□ 0.3
GCFC2-211ENST00000541687 OFD1O75665 1012 aa16.93■□□□□ 0.3
GCFC2-211ENST00000541687 ARHGEF10O15013 1369 aa16.93■□□□□ 0.3
GCFC2-211ENST00000541687 MINDY4BA8MYZ0 360 aa16.93■□□□□ 0.3
GCFC2-211ENST00000541687 MCM5P33992 734 aa16.93■□□□□ 0.3
GCFC2-211ENST00000541687 GPS2Q13227 327 aa16.93■□□□□ 0.3
GCFC2-211ENST00000541687 CFAP100Q494V2 611 aa16.93■□□□□ 0.3
GCFC2-211ENST00000541687 PDCL2Q8N4E4 241 aa16.93■□□□□ 0.3
GCFC2-211ENST00000541687 KIF24Q5T7B8 1368 aa16.93■□□□□ 0.3
GCFC2-211ENST00000541687 UVSSAQ2YD98 709 aa16.93■□□□□ 0.3
GCFC2-211ENST00000541687 NACAP1Q9BZK3 213 aa16.93■□□□□ 0.3
GCFC2-211ENST00000541687 HECW2Q9P2P5 1572 aa16.92■□□□□ 0.3
GCFC2-211ENST00000541687 G3V3G9 751 aa16.92■□□□□ 0.3
GCFC2-211ENST00000541687 TNNT1P13805 278 aa16.92■□□□□ 0.3
GCFC2-211ENST00000541687 DCAF8Q5TAQ9 597 aa16.92■□□□□ 0.3
GCFC2-211ENST00000541687 ANO10Q9NW15 660 aa16.92■□□□□ 0.3
GCFC2-211ENST00000541687 SLC27A2O14975 620 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms