RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 USP37Q86T82 979 aa11.47□□□□□ -0.57
TRERF1-205ENST00000541110 RNF34Q969K3 372 aa11.47□□□□□ -0.57
TRERF1-205ENST00000541110 KRT13P13646 458 aa11.47□□□□□ -0.57
TRERF1-205ENST00000541110 CCDC14Q49A88 953 aa11.47□□□□□ -0.57
TRERF1-205ENST00000541110 MICALCLQ6ZW33 695 aa11.47□□□□□ -0.57
TRERF1-205ENST00000541110 NAP1L3Q99457 506 aaPredicted RBP11.47□□□□□ -0.57
TRERF1-205ENST00000541110 RIOK3O14730 519 aaKnown RBP11.47□□□□□ -0.57
TRERF1-205ENST00000541110 CTR9Q6PD62 1173 aa11.47□□□□□ -0.57
TRERF1-205ENST00000541110 RASA3Q14644 834 aa11.47□□□□□ -0.57
TRERF1-205ENST00000541110 GPHNQ9NQX3 736 aaPredicted RBP11.47□□□□□ -0.57
TRERF1-205ENST00000541110 GMNNO75496 209 aa11.46□□□□□ -0.57
TRERF1-205ENST00000541110 SFPQP23246 707 aaKnown RBP eCLIP11.46□□□□□ -0.57
TRERF1-205ENST00000541110 CCDC65Q8IXS2 484 aa11.46□□□□□ -0.57
TRERF1-205ENST00000541110 ERMNQ8TAM6 284 aa11.46□□□□□ -0.57
TRERF1-205ENST00000541110 CCDC8Q9H0W5 538 aaPredicted RBP11.46□□□□□ -0.57
TRERF1-205ENST00000541110 RPGRIP1LQ68CZ1 1315 aa11.46□□□□□ -0.57
TRERF1-205ENST00000541110 NBPF8Q3BBV2 869 aa11.46□□□□□ -0.57
TRERF1-205ENST00000541110 NBPF14Q5TI25 921 aa11.46□□□□□ -0.57
TRERF1-205ENST00000541110 FBF1Q8TES7 1133 aa11.46□□□□□ -0.57
TRERF1-205ENST00000541110 FAM13AO94988 1023 aa11.46□□□□□ -0.57
TRERF1-205ENST00000541110 SPECC1LQ69YQ0 1117 aa11.46□□□□□ -0.57
TRERF1-205ENST00000541110 PRPF40BQ6NWY9 871 aaKnown RBP11.46□□□□□ -0.57
TRERF1-205ENST00000541110 MFSD6Q6ZSS7 791 aa11.46□□□□□ -0.57
TRERF1-205ENST00000541110 HEATR3Q7Z4Q2 680 aa11.46□□□□□ -0.57
TRERF1-205ENST00000541110 EXOC6BQ9Y2D4 811 aa11.46□□□□□ -0.57
TRERF1-205ENST00000541110 IFI16Q16666 785 aaKnown RBP11.46□□□□□ -0.58
TRERF1-205ENST00000541110 FERMT3Q86UX7 667 aa11.46□□□□□ -0.58
TRERF1-205ENST00000541110 CCDC155Q8N6L0 562 aa11.46□□□□□ -0.58
TRERF1-205ENST00000541110 TTF1Q15361 905 aaPredicted RBP11.46□□□□□ -0.58
TRERF1-205ENST00000541110 JDP2Q8WYK2 163 aa11.46□□□□□ -0.58
TRERF1-205ENST00000541110 KIF1BPQ96EK5 621 aa11.46□□□□□ -0.58
TRERF1-205ENST00000541110 PLVAPQ9BX97 442 aa11.46□□□□□ -0.58
TRERF1-205ENST00000541110 CRNKL1Q9BZJ0 848 aaKnown RBP11.46□□□□□ -0.58
TRERF1-205ENST00000541110 UBA7P41226 1012 aa11.46□□□□□ -0.58
TRERF1-205ENST00000541110 CEP83Q9Y592 693 aa11.46□□□□□ -0.58
TRERF1-205ENST00000541110 RBM25P49756 843 aaKnown RBP11.45□□□□□ -0.58
TRERF1-205ENST00000541110 PTPN14Q15678 1187 aa11.45□□□□□ -0.58
TRERF1-205ENST00000541110 EPSTI1Q96J88 318 aa11.45□□□□□ -0.58
TRERF1-205ENST00000541110 ANO10Q9NW15 660 aa11.45□□□□□ -0.58
TRERF1-205ENST00000541110 DDX12PQ92771 950 aa11.45□□□□□ -0.58
TRERF1-205ENST00000541110 PANK2Q9BZ23 570 aa11.45□□□□□ -0.58
TRERF1-205ENST00000541110 KIF5AQ12840 1032 aa11.45□□□□□ -0.58
TRERF1-205ENST00000541110 SLC12A5Q9H2X9 1139 aa11.45□□□□□ -0.58
TRERF1-205ENST00000541110 ZBTB3Q9H5J0 574 aa11.45□□□□□ -0.58
TRERF1-205ENST00000541110 CACYBPQ9HB71 228 aaKnown RBP11.45□□□□□ -0.58
TRERF1-205ENST00000541110 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.45□□□□□ -0.58
TRERF1-205ENST00000541110 V9GYY5 206 aaPredicted RBP11.45□□□□□ -0.58
TRERF1-205ENST00000541110 CCDC6Q16204 474 aa11.45□□□□□ -0.58
TRERF1-205ENST00000541110 IL27Q8NEV9 243 aa11.45□□□□□ -0.58
TRERF1-205ENST00000541110 UBAP1LF5GYI3 381 aa11.45□□□□□ -0.58
TRERF1-205ENST00000541110 PARP3Q9Y6F1 533 aa11.45□□□□□ -0.58
TRERF1-205ENST00000541110 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.45□□□□□ -0.58
TRERF1-205ENST00000541110 CUX1P39880 1505 aa11.45□□□□□ -0.58
TRERF1-205ENST00000541110 ATP2C2O75185 946 aa11.44□□□□□ -0.58
TRERF1-205ENST00000541110 ATXN8OSP0DMR3 200 aa11.44□□□□□ -0.58
TRERF1-205ENST00000541110 MCM10Q7L590 875 aa11.44□□□□□ -0.58
TRERF1-205ENST00000541110 SMARCC2Q8TAQ2 1214 aa11.44□□□□□ -0.58
TRERF1-205ENST00000541110 FAM107BQ9H098 131 aa11.44□□□□□ -0.58
TRERF1-205ENST00000541110 POLR3GO15318 223 aaPredicted RBP11.44□□□□□ -0.58
TRERF1-205ENST00000541110 RAB11FIP3O75154 756 aa11.44□□□□□ -0.58
TRERF1-205ENST00000541110 RSPH3Q86UC2 560 aa11.44□□□□□ -0.58
TRERF1-205ENST00000541110 SRRTQ9BXP5 876 aaKnown RBP11.44□□□□□ -0.58
TRERF1-205ENST00000541110 FAM169AQ9Y6X4 670 aa11.44□□□□□ -0.58
TRERF1-205ENST00000541110 SMARCA5O60264 1052 aaPredicted RBP11.44□□□□□ -0.58
TRERF1-205ENST00000541110 AFAP1Q8N556 730 aa11.44□□□□□ -0.58
TRERF1-205ENST00000541110 SLC26A6Q9BXS9 759 aa11.44□□□□□ -0.58
TRERF1-205ENST00000541110 CFAP65Q6ZU64 1925 aaKnown RBP11.44□□□□□ -0.58
TRERF1-205ENST00000541110 IFIT1BQ5T764 474 aaKnown RBP11.44□□□□□ -0.58
TRERF1-205ENST00000541110 MKRN1Q9UHC7 482 aaKnown RBP11.44□□□□□ -0.58
TRERF1-205ENST00000541110 FANCD2Q9BXW9 1451 aa11.44□□□□□ -0.58
TRERF1-205ENST00000541110 PLCB3Q01970 1234 aa11.44□□□□□ -0.58
TRERF1-205ENST00000541110 PPP2R5CQ13362 524 aa11.44□□□□□ -0.58
TRERF1-205ENST00000541110 ATP6V1AP38606 617 aa11.44□□□□□ -0.58
TRERF1-205ENST00000541110 RAB11FIP4Q86YS3 637 aa11.44□□□□□ -0.58
TRERF1-205ENST00000541110 CCDC89Q8N998 374 aa11.44□□□□□ -0.58
TRERF1-205ENST00000541110 MYOM3Q5VTT5 1437 aa11.43□□□□□ -0.58
TRERF1-205ENST00000541110 HMGB1P09429 215 aaKnown RBP11.43□□□□□ -0.58
TRERF1-205ENST00000541110 DUSP27Q5VZP5 1158 aa11.43□□□□□ -0.58
TRERF1-205ENST00000541110 NOP9Q86U38 636 aaKnown RBP11.43□□□□□ -0.58
TRERF1-205ENST00000541110 LRRC27Q9C0I9 530 aa11.43□□□□□ -0.58
TRERF1-205ENST00000541110 BIN1O00499 593 aa11.43□□□□□ -0.58
TRERF1-205ENST00000541110 RIMBP2O15034 1052 aa11.43□□□□□ -0.58
TRERF1-205ENST00000541110 CCDC152Q4G0S7 254 aa11.43□□□□□ -0.58
TRERF1-205ENST00000541110 CEP112Q8N8E3 955 aa11.43□□□□□ -0.58
TRERF1-205ENST00000541110 TRMT1Q9NXH9 659 aaKnown RBP11.43□□□□□ -0.58
TRERF1-205ENST00000541110 STAT6P42226 847 aa11.43□□□□□ -0.58
TRERF1-205ENST00000541110 HAND2P61296 217 aa11.43□□□□□ -0.58
TRERF1-205ENST00000541110 LDHAL6AQ6ZMR3 332 aa11.43□□□□□ -0.58
TRERF1-205ENST00000541110 MICU3Q86XE3 530 aa11.43□□□□□ -0.58
TRERF1-205ENST00000541110 GSDMBQ8TAX9 411 aa11.43□□□□□ -0.58
TRERF1-205ENST00000541110 TRIM6Q9C030 488 aaPredicted RBP11.43□□□□□ -0.58
TRERF1-205ENST00000541110 TFCP2L1Q9NZI6 479 aa11.43□□□□□ -0.58
TRERF1-205ENST00000541110 GOLIM4O00461 696 aa11.43□□□□□ -0.58
TRERF1-205ENST00000541110 ARID5AQ03989 594 aa11.43□□□□□ -0.58
TRERF1-205ENST00000541110 CKAP4Q07065 602 aaKnown RBP11.43□□□□□ -0.58
TRERF1-205ENST00000541110 SYCE3A1L190 88 aa11.43□□□□□ -0.58
TRERF1-205ENST00000541110 SPDYE3A6NKU9 549 aa11.43□□□□□ -0.58
TRERF1-205ENST00000541110 CFAP157Q5JU67 520 aa11.43□□□□□ -0.58
TRERF1-205ENST00000541110 TMCO4Q5TGY1 634 aa11.42□□□□□ -0.58
TRERF1-205ENST00000541110 LARP6Q9BRS8 491 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms