RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 LMNB1P20700 586 aa24.78■■□□□ 1.56
RAB35-204ENST00000540803 PLBD2Q8NHP8 589 aa24.78■■□□□ 1.56
RAB35-204ENST00000540803 SALL2Q9Y467 1007 aaPredicted RBP24.78■■□□□ 1.56
RAB35-204ENST00000540803 DICER1Q9UPY3 1922 aaKnown RBP24.78■■□□□ 1.56
RAB35-204ENST00000540803 ANKRD13DQ6ZTN6 518 aa24.77■■□□□ 1.56
RAB35-204ENST00000540803 NLRP10Q86W26 655 aa24.77■■□□□ 1.56
RAB35-204ENST00000540803 C7orf43Q8WVR3 580 aa24.77■■□□□ 1.56
RAB35-204ENST00000540803 UTP14AQ9BVJ6 771 aaKnown RBP24.77■■□□□ 1.56
RAB35-204ENST00000540803 LAMB2P55268 1798 aa24.77■■□□□ 1.56
RAB35-204ENST00000540803 C1QTNF8P60827 252 aa24.76■■□□□ 1.55
RAB35-204ENST00000540803 PHAXQ9H814 394 aaKnown RBP24.75■■□□□ 1.55
RAB35-204ENST00000540803 ALDH1B1P30837 517 aa24.74■■□□□ 1.55
RAB35-204ENST00000540803 SOGA3Q5TF21 947 aa24.74■■□□□ 1.55
RAB35-204ENST00000540803 C3orf67Q6ZVT6 689 aa24.74■■□□□ 1.55
RAB35-204ENST00000540803 WDR63Q8IWG1 891 aa24.74■■□□□ 1.55
RAB35-204ENST00000540803 RNF123Q5XPI4 1314 aa24.74■■□□□ 1.55
RAB35-204ENST00000540803 LTBP3Q9NS15 1303 aa24.73■■□□□ 1.55
RAB35-204ENST00000540803 SLC10A5Q5PT55 438 aa24.73■■□□□ 1.55
RAB35-204ENST00000540803 CCDC30Q5VVM6 783 aa24.73■■□□□ 1.55
RAB35-204ENST00000540803 ISCA1Q9BUE6 129 aa24.73■■□□□ 1.55
RAB35-204ENST00000540803 FANCIQ9NVI1 1328 aa24.72■■□□□ 1.55
RAB35-204ENST00000540803 ZC3H4Q9UPT8 1303 aaKnown RBP24.72■■□□□ 1.55
RAB35-204ENST00000540803 KIF3CO14782 793 aa24.72■■□□□ 1.55
RAB35-204ENST00000540803 HOXA10P31260 410 aaPredicted RBP24.72■■□□□ 1.55
RAB35-204ENST00000540803 RPGRQ92834 1020 aaKnown RBP24.72■■□□□ 1.55
RAB35-204ENST00000540803 TAOK3Q9H2K8 898 aa24.72■■□□□ 1.55
RAB35-204ENST00000540803 DDX60Q8IY21 1712 aaKnown RBP24.72■■□□□ 1.55
RAB35-204ENST00000540803 CCDC93Q567U6 631 aa24.71■■□□□ 1.55
RAB35-204ENST00000540803 OLFM4Q6UX06 510 aa24.71■■□□□ 1.55
RAB35-204ENST00000540803 SYNE4Q8N205 404 aa24.71■■□□□ 1.55
RAB35-204ENST00000540803 CHMP4AQ9BY43 222 aa24.71■■□□□ 1.55
RAB35-204ENST00000540803 ATP5J2-PTCD1G3V325 749 aa24.7■■□□□ 1.54
RAB35-204ENST00000540803 GOLGA2Q08379 1002 aa24.7■■□□□ 1.54
RAB35-204ENST00000540803 TWISTNBQ3B726 338 aaPredicted RBP24.7■■□□□ 1.54
RAB35-204ENST00000540803 ZNF428Q96B54 188 aa24.7■■□□□ 1.54
RAB35-204ENST00000540803 NLRP3Q96P20 1036 aa24.7■■□□□ 1.54
RAB35-204ENST00000540803 TRMT112Q9UI30 125 aaKnown RBP24.7■■□□□ 1.54
RAB35-204ENST00000540803 SH3TC1Q8TE82 1336 aa24.69■■□□□ 1.54
RAB35-204ENST00000540803 NMRK2Q9NPI5 230 aa24.69■■□□□ 1.54
RAB35-204ENST00000540803 RIC3Q7Z5B4 369 aa24.68■■□□□ 1.54
RAB35-204ENST00000540803 RBM17Q96I25 401 aaKnown RBP24.68■■□□□ 1.54
RAB35-204ENST00000540803 CRAMP1Q96RY5 1269 aa24.68■■□□□ 1.54
RAB35-204ENST00000540803 SPINK5Q9NQ38 1064 aaPredicted RBP24.68■■□□□ 1.54
RAB35-204ENST00000540803 SNED1Q8TER0 1413 aa24.68■■□□□ 1.54
RAB35-204ENST00000540803 CACNA1FO60840 1977 aa24.67■■□□□ 1.54
RAB35-204ENST00000540803 KDM2BQ8NHM5 1336 aa24.67■■□□□ 1.54
RAB35-204ENST00000540803 HCLS1P14317 486 aaPredicted RBP24.67■■□□□ 1.54
RAB35-204ENST00000540803 TCERG1O14776 1098 aaKnown RBP24.66■■□□□ 1.54
RAB35-204ENST00000540803 TRIM28Q13263 835 aaKnown RBP24.66■■□□□ 1.54
RAB35-204ENST00000540803 TAF1P21675 1872 aa24.65■■□□□ 1.54
RAB35-204ENST00000540803 FKBP4Q02790 459 aaKnown RBP eCLIP24.65■■□□□ 1.541e-7■■■■□ 21.2
RAB35-204ENST00000540803 RTKN2Q8IZC4 609 aa24.65■■□□□ 1.54
RAB35-204ENST00000540803 STK31Q9BXU1 1019 aa24.65■■□□□ 1.54
RAB35-204ENST00000540803 ABCC4O15439 1325 aa24.63■■□□□ 1.53
RAB35-204ENST00000540803 GLTPD2A6NH11 291 aa24.63■■□□□ 1.53
RAB35-204ENST00000540803 PPEF1O14829 653 aaPredicted RBP24.63■■□□□ 1.53
RAB35-204ENST00000540803 DDX58O95786 925 aaKnown RBP24.63■■□□□ 1.53
RAB35-204ENST00000540803 EXOSC9Q06265 439 aaKnown RBP24.63■■□□□ 1.53
RAB35-204ENST00000540803 SLC51AQ86UW1 340 aa24.63■■□□□ 1.53
RAB35-204ENST00000540803 FAM89AQ96GI7 184 aa24.63■■□□□ 1.53
RAB35-204ENST00000540803 MYD88Q99836 296 aa24.63■■□□□ 1.53
RAB35-204ENST00000540803 ZNF521Q96K83 1311 aa24.62■■□□□ 1.53
RAB35-204ENST00000540803 VAMP4O75379 141 aa24.61■■□□□ 1.53
RAB35-204ENST00000540803 CC2D2BQ6DHV5 1058 aa24.61■■□□□ 1.53
RAB35-204ENST00000540803 G2E3Q7L622 706 aa24.61■■□□□ 1.53
RAB35-204ENST00000540803 METTL22Q9BUU2 404 aaPredicted RBP24.61■■□□□ 1.53
RAB35-204ENST00000540803 RRAGCQ9HB90 399 aa24.61■■□□□ 1.53
RAB35-204ENST00000540803 ZNF277Q9NRM2 450 aaPredicted RBP24.61■■□□□ 1.53
RAB35-204ENST00000540803 MAP3K2Q9Y2U5 619 aa24.61■■□□□ 1.53
RAB35-204ENST00000540803 SLC4A2P04920 1241 aa24.6■■□□□ 1.53
RAB35-204ENST00000540803 RTL5Q5HYW3 569 aaPredicted RBP24.6■■□□□ 1.53
RAB35-204ENST00000540803 KSR2Q6VAB6 950 aa24.6■■□□□ 1.53
RAB35-204ENST00000540803 WDR90Q96KV7 1748 aa24.59■■□□□ 1.53
RAB35-204ENST00000540803 PI4KAP2A4QPH2 592 aa24.59■■□□□ 1.53
RAB35-204ENST00000540803 PI4KAP1Q8N8J0 262 aa24.59■■□□□ 1.53
RAB35-204ENST00000540803 CCDC191Q8NCU4 936 aa24.59■■□□□ 1.53
RAB35-204ENST00000540803 PSMD1Q99460 953 aa24.59■■□□□ 1.53
RAB35-204ENST00000540803 MYH16Q9H6N6 1097 aa24.59■■□□□ 1.53
RAB35-204ENST00000540803 CCER2I3L3R5 266 aa24.58■■□□□ 1.53
RAB35-204ENST00000540803 TOMM70O94826 608 aa24.58■■□□□ 1.53
RAB35-204ENST00000540803 ZBTB38Q8NAP3 1195 aaPredicted RBP24.58■■□□□ 1.53
RAB35-204ENST00000540803 IRS4O14654 1257 aaPredicted RBP24.57■■□□□ 1.52
RAB35-204ENST00000540803 DDX46Q7L014 1031 aaKnown RBP24.57■■□□□ 1.52
RAB35-204ENST00000540803 CWC25Q9NXE8 425 aaPredicted RBP24.57■■□□□ 1.52
RAB35-204ENST00000540803 ATP6V0A2Q9Y487 856 aa24.57■■□□□ 1.52
RAB35-204ENST00000540803 IARSP41252 1262 aaKnown RBP24.56■■□□□ 1.52
RAB35-204ENST00000540803 GRAPQ13588 217 aa24.56■■□□□ 1.52
RAB35-204ENST00000540803 SF3B3Q15393 1217 aaKnown RBP24.56■■□□□ 1.52
RAB35-204ENST00000540803 GRIPAP1Q4V328 841 aa24.56■■□□□ 1.52
RAB35-204ENST00000540803 DPY19L2Q6NUT2 758 aa24.56■■□□□ 1.52
RAB35-204ENST00000540803 GRAPLQ8TC17 118 aaPredicted RBP24.56■■□□□ 1.52
RAB35-204ENST00000540803 COL4A1P02462 1669 aa24.56■■□□□ 1.52
RAB35-204ENST00000540803 LRRC37AA6NMS7 1700 aa24.55■■□□□ 1.52
RAB35-204ENST00000540803 BBOX1O75936 387 aa24.55■■□□□ 1.52
RAB35-204ENST00000540803 IGKV5-2P06315 115 aa24.55■■□□□ 1.52
RAB35-204ENST00000540803 FLIIQ13045 1269 aa24.55■■□□□ 1.52
RAB35-204ENST00000540803 COL4A5P29400 1685 aa24.55■■□□□ 1.52
RAB35-204ENST00000540803 PCCAP05165 728 aaPredicted RBP24.54■■□□□ 1.52
RAB35-204ENST00000540803 POTECB2RU33 542 aa24.53■■□□□ 1.52
RAB35-204ENST00000540803 C16orf71Q8IYS4 520 aaPredicted RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms