RNA–Protein interactions for RNA: ENST00000540785.1

CARS2-223, Transcript of cysteinyl-tRNA synthetase 2, mitochondrial, human

TSL 3

Gene CARS2, Length 301 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARS2-223	ENST00000540785	ZNF438	Q7Z4V0	828 aa		4.02	□□□□□ -1.77
CARS2-223	ENST00000540785	CDAN1	Q8IWY9	1227 aa		4.02	□□□□□ -1.77
CARS2-223	ENST00000540785	PMFBP1	Q8TBY8	1022 aa		4.02	□□□□□ -1.77
CARS2-223	ENST00000540785	CCDC74A	Q96AQ1	378 aa		4.02	□□□□□ -1.77
CARS2-223	ENST00000540785	ZFAND3	Q9H8U3	227 aa		4.02	□□□□□ -1.77
CARS2-223	ENST00000540785	ANKIB1	Q9P2G1	1089 aa		4.02	□□□□□ -1.77
CARS2-223	ENST00000540785	USP20	Q9Y2K6	914 aa		4.02	□□□□□ -1.77
CARS2-223	ENST00000540785	PCDHGB7	Q9Y5F8	929 aa		4.02	□□□□□ -1.77
CARS2-223	ENST00000540785	TTC24	A2A3L6	582 aa	Predicted RBP	4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	UBAP1L	F5GYI3	381 aa		4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	TGFBR3L	H3BV60	316 aa		4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	PHACTR2	O75167	634 aa		4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	GADD45B	O75293	160 aa	Predicted RBP	4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	TNFRSF21	O75509	655 aa		4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	IDH3A	P50213	366 aa		4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	TAF1C	Q15572	869 aa	Predicted RBP	4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	C4orf17	Q53FE4	359 aa		4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	ZNF697	Q5TEC3	545 aa		4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	USPL1	Q5W0Q7	1092 aa		4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	ZNF295-AS1	Q8N0V1	137 aa		4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	SNIP1	Q8TAD8	396 aa	Known RBP	4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	EPS8L3	Q8TE67	593 aa	Known RBP	4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	SUSD3	Q96L08	255 aa		4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	GRIP2	Q9C0E4	1043 aa		4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	LNPK	Q9C0E8	428 aa		4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	C12orf49	Q9H741	205 aa		4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	FOXD3	Q9UJU5	478 aa	Predicted RBP	4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	DDX41	Q9UJV9	622 aa	Known RBP	4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	BCS1L	Q9Y276	419 aa		4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	CADPS	Q9ULU8	1353 aa		4.01	□□□□□ -1.77
CARS2-223	ENST00000540785	GPC1	P35052	558 aa		4	□□□□□ -1.77
CARS2-223	ENST00000540785	IRS1	P35568	1242 aa		4	□□□□□ -1.77
CARS2-223	ENST00000540785	ARSD	P51689	593 aa		4	□□□□□ -1.77
CARS2-223	ENST00000540785	RACK1	P63244	317 aa	Known RBP	4	□□□□□ -1.77
CARS2-223	ENST00000540785	ARSJ	Q5FYB0	599 aa	Predicted RBP	4	□□□□□ -1.77
CARS2-223	ENST00000540785	MEI1	Q5TIA1	1274 aa		4	□□□□□ -1.77
CARS2-223	ENST00000540785	SPRYD7	Q5W111	196 aa		4	□□□□□ -1.77
CARS2-223	ENST00000540785	GIMAP6	Q6P9H5	292 aa		4	□□□□□ -1.77
CARS2-223	ENST00000540785	PI16	Q6UXB8	463 aa		4	□□□□□ -1.77
CARS2-223	ENST00000540785	ZNF280C	Q8ND82	737 aa		4	□□□□□ -1.77
CARS2-223	ENST00000540785	SNX29	Q8TEQ0	813 aa		4	□□□□□ -1.77
CARS2-223	ENST00000540785	EMID1	Q96A84	441 aa	Predicted RBP	4	□□□□□ -1.77
CARS2-223	ENST00000540785	HSH2D	Q96JZ2	352 aa		4	□□□□□ -1.77
CARS2-223	ENST00000540785	OSBPL7	Q9BZF2	842 aa		4	□□□□□ -1.77
CARS2-223	ENST00000540785	ELP3	Q9H9T3	547 aa		4	□□□□□ -1.77
CARS2-223	ENST00000540785	ZFYVE28	Q9HCC9	887 aa		4	□□□□□ -1.77
CARS2-223	ENST00000540785	POLM	Q9NP87	494 aa	Predicted RBP	4	□□□□□ -1.77
CARS2-223	ENST00000540785	CUEDC1	Q9NWM3	386 aa	Predicted RBP	4	□□□□□ -1.77
CARS2-223	ENST00000540785	PPP4R2	Q9NY27	417 aa		4	□□□□□ -1.77
CARS2-223	ENST00000540785	RTCB	Q9Y3I0	505 aa	Known RBP	4	□□□□□ -1.77
CARS2-223	ENST00000540785	GJA3	Q9Y6H8	435 aa		4	□□□□□ -1.77
CARS2-223	ENST00000540785		V9GY48	417 aa	Predicted RBP	4	□□□□□ -1.77
CARS2-223	ENST00000540785	USP31	Q70CQ4	1352 aa		4	□□□□□ -1.77
CARS2-223	ENST00000540785		J3QL48	77 aa		3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	STK10	O94804	968 aa	Known RBP	3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	UPP2	O95045	317 aa		3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	POLR3D	P05423	398 aa	Predicted RBP	3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	USP17L7	P0C7H9	530 aa		3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	TIMP2	P16035	220 aa		3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	NCL	P19338	710 aa	Known RBP	3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	RNF144A	P50876	292 aa	Predicted RBP	3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	PTPN12	Q05209	780 aa	Known RBP	3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	POU4F2	Q12837	409 aa		3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	CCDC144B	Q3MJ40	725 aa		3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	SOGA3	Q5TF21	947 aa		3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	PDE12	Q6L8Q7	609 aa	Known RBP	3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	NBPF10	Q6P3W6	841 aa	Known RBP	3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	NXPE4	Q6UWF7	544 aa		3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	XKR5	Q6UX68	686 aa		3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	LRRC69	Q6ZNQ3	347 aa		3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	PRICKLE2	Q7Z3G6	844 aa		3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	NOP9	Q86U38	636 aa	Known RBP	3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	ZNF598	Q86UK7	904 aa	Known RBP	3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	CYP4X1	Q8N118	509 aa		3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	ARMC5	Q96C12	935 aa		3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	INSM2	Q96T92	566 aa	Predicted RBP	3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	GML	Q99445	158 aa		3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	TSEN34	Q9BSV6	310 aa	Known RBP	3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	HIRIP3	Q9BW71	556 aa	Predicted RBP	3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	KLF16	Q9BXK1	252 aa	Predicted RBP	3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	ZDHHC3	Q9NYG2	299 aa		3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	FAM8A1	Q9UBU6	413 aa		3.99	□□□□□ -1.77
CARS2-223	ENST00000540785	ANKRD62	A6NC57	917 aa		3.98	□□□□□ -1.77
CARS2-223	ENST00000540785	EPB42	P16452	691 aa		3.98	□□□□□ -1.77
CARS2-223	ENST00000540785	INPP5B	P32019	993 aa		3.98	□□□□□ -1.77
CARS2-223	ENST00000540785	TTC39B	Q5VTQ0	682 aa	Predicted RBP	3.98	□□□□□ -1.77
CARS2-223	ENST00000540785	IER5	Q5VY09	327 aa		3.98	□□□□□ -1.77
CARS2-223	ENST00000540785	BTLA	Q7Z6A9	289 aa		3.98	□□□□□ -1.77
CARS2-223	ENST00000540785	C7orf43	Q8WVR3	580 aa		3.98	□□□□□ -1.77
CARS2-223	ENST00000540785	RNF166	Q96A37	237 aa	Predicted RBP	3.98	□□□□□ -1.77
CARS2-223	ENST00000540785	CEP63	Q96MT8	703 aa		3.98	□□□□□ -1.77
CARS2-223	ENST00000540785	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	3.98	□□□□□ -1.77	3e-7	■■□□□ 14
CARS2-223	ENST00000540785	BCO2	Q9BYV7	579 aa		3.98	□□□□□ -1.77
CARS2-223	ENST00000540785	ZSWIM4	Q9H7M6	989 aa		3.98	□□□□□ -1.77
CARS2-223	ENST00000540785	SRA1	Q9HD15	236 aa	Known RBP	3.98	□□□□□ -1.77
CARS2-223	ENST00000540785	NPHS2	Q9NP85	383 aa		3.98	□□□□□ -1.77
CARS2-223	ENST00000540785	DMGDH	Q9UI17	866 aa	Known RBP	3.98	□□□□□ -1.77
CARS2-223	ENST00000540785	TMA7	Q9Y2S6	64 aa	Known RBP	3.98	□□□□□ -1.77
CARS2-223	ENST00000540785	SPATA31C2	B4DYI2	1134 aa		3.97	□□□□□ -1.77
CARS2-223	ENST00000540785	XYLB	O75191	536 aa		3.97	□□□□□ -1.77

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