RNA–Protein interactions for RNA: ENST00000540771.5

RAB6A-206, Transcript of RAB6A, member RAS oncogene family, human

TSL 5

Gene RAB6A, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB6A-206	ENST00000540771	BRIP1	Q9BX63	1249 aa		28.42	■■■□□ 2.14
RAB6A-206	ENST00000540771	BEND3	Q5T5X7	828 aa		28.41	■■■□□ 2.14
RAB6A-206	ENST00000540771	CCDC24	Q8N4L8	307 aa		28.41	■■■□□ 2.14
RAB6A-206	ENST00000540771	CWC25	Q9NXE8	425 aa	Predicted RBP	28.41	■■■□□ 2.14
RAB6A-206	ENST00000540771	TRMT112	Q9UI30	125 aa	Known RBP	28.41	■■■□□ 2.14
RAB6A-206	ENST00000540771	NEURL1B	A8MQ27	555 aa		28.4	■■■□□ 2.14
RAB6A-206	ENST00000540771	TGFB2	P61812	414 aa		28.4	■■■□□ 2.14
RAB6A-206	ENST00000540771	ERFE	Q4G0M1	354 aa		28.4	■■■□□ 2.14
RAB6A-206	ENST00000540771	NUTM1	Q86Y26	1132 aa		28.4	■■■□□ 2.14
RAB6A-206	ENST00000540771	API5	Q9BZZ5	524 aa	Known RBP	28.4	■■■□□ 2.14
RAB6A-206	ENST00000540771	IPO8	O15397	1037 aa	Known RBP	28.39	■■■□□ 2.14
RAB6A-206	ENST00000540771	CWF19L2	Q2TBE0	894 aa	Known RBP	28.39	■■■□□ 2.14
RAB6A-206	ENST00000540771	RCAN3	Q9UKA8	241 aa		28.39	■■■□□ 2.14
RAB6A-206	ENST00000540771	SLC10A5	Q5PT55	438 aa		28.38	■■■□□ 2.13
RAB6A-206	ENST00000540771	SH3TC1	Q8TE82	1336 aa		28.38	■■■□□ 2.13
RAB6A-206	ENST00000540771	KIF13B	Q9NQT8	1826 aa		28.37	■■■□□ 2.13
RAB6A-206	ENST00000540771	PDE6B	P35913	854 aa		28.37	■■■□□ 2.13
RAB6A-206	ENST00000540771	SLC4A10	Q6U841	1118 aa		28.37	■■■□□ 2.13
RAB6A-206	ENST00000540771	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	28.37	■■■□□ 2.13
RAB6A-206	ENST00000540771	NLGN2	Q8NFZ4	835 aa		28.37	■■■□□ 2.13
RAB6A-206	ENST00000540771	FRAT1	Q92837	279 aa	Predicted RBP	28.36	■■■□□ 2.13
RAB6A-206	ENST00000540771	PDZRN3	Q9UPQ7	1066 aa		28.36	■■■□□ 2.13
RAB6A-206	ENST00000540771	KLRG2	A4D1S0	409 aa	Predicted RBP	28.35	■■■□□ 2.13
RAB6A-206	ENST00000540771	ALDH1L1	O75891	902 aa		28.35	■■■□□ 2.13
RAB6A-206	ENST00000540771	PCCA	P05165	728 aa	Predicted RBP	28.35	■■■□□ 2.13
RAB6A-206	ENST00000540771	GCKR	Q14397	625 aa		28.35	■■■□□ 2.13
RAB6A-206	ENST00000540771	SYNE4	Q8N205	404 aa		28.35	■■■□□ 2.13
RAB6A-206	ENST00000540771	FAM89A	Q96GI7	184 aa		28.35	■■■□□ 2.13
RAB6A-206	ENST00000540771	SRCIN1	Q9C0H9	1055 aa		28.35	■■■□□ 2.13
RAB6A-206	ENST00000540771	ABCC12	Q96J65	1359 aa		28.35	■■■□□ 2.13
RAB6A-206	ENST00000540771	RIC1	Q4ADV7	1423 aa		28.35	■■■□□ 2.13
RAB6A-206	ENST00000540771	ATF7IP	Q6VMQ6	1270 aa		28.34	■■■□□ 2.13
RAB6A-206	ENST00000540771	PXDNL	A1KZ92	1463 aa		28.34	■■■□□ 2.13
RAB6A-206	ENST00000540771	DPEP1	P16444	411 aa		28.33	■■■□□ 2.13
RAB6A-206	ENST00000540771	ZKSCAN2	Q63HK3	967 aa		28.33	■■■□□ 2.13
RAB6A-206	ENST00000540771		A0A0G2JLW4	131 aa		28.32	■■■□□ 2.12
RAB6A-206	ENST00000540771		H7C1W4	665 aa		28.32	■■■□□ 2.12
RAB6A-206	ENST00000540771		H0YIN7	160 aa		28.31	■■■□□ 2.12
RAB6A-206	ENST00000540771	TRIM27	P14373	513 aa		28.31	■■■□□ 2.12
RAB6A-206	ENST00000540771	KCNA3	P22001	575 aa		28.31	■■■□□ 2.12
RAB6A-206	ENST00000540771	CHRNA5	P30532	468 aa		28.31	■■■□□ 2.12
RAB6A-206	ENST00000540771	C2CD5	Q86YS7	1000 aa		28.31	■■■□□ 2.12
RAB6A-206	ENST00000540771	IRS4	O14654	1257 aa	Predicted RBP	28.3	■■■□□ 2.12
RAB6A-206	ENST00000540771	HCLS1	P14317	486 aa	Predicted RBP	28.3	■■■□□ 2.12
RAB6A-206	ENST00000540771	RTL5	Q5HYW3	569 aa	Predicted RBP	28.3	■■■□□ 2.12
RAB6A-206	ENST00000540771	NLRP3	Q96P20	1036 aa		28.3	■■■□□ 2.12
RAB6A-206	ENST00000540771	ANKRD31	Q8N7Z5	1873 aa		28.29	■■■□□ 2.12
RAB6A-206	ENST00000540771	ABCC4	O15439	1325 aa		28.29	■■■□□ 2.12
RAB6A-206	ENST00000540771	CDHR2	Q9BYE9	1310 aa		28.29	■■■□□ 2.12
RAB6A-206	ENST00000540771	HSP90B1	P14625	803 aa	Known RBP	28.29	■■■□□ 2.12
RAB6A-206	ENST00000540771	CCT4	P50991	539 aa	Known RBP	28.29	■■■□□ 2.12
RAB6A-206	ENST00000540771	JARID2	Q92833	1246 aa	Predicted RBP	28.29	■■■□□ 2.12
RAB6A-206	ENST00000540771	SRGN	P10124	158 aa		28.28	■■■□□ 2.12
RAB6A-206	ENST00000540771	CRY2	Q49AN0	593 aa		28.28	■■■□□ 2.12
RAB6A-206	ENST00000540771	KIAA1551	Q9HCM1	1747 aa		28.28	■■■□□ 2.12
RAB6A-206	ENST00000540771	CASP7	P55210	303 aa		28.27	■■■□□ 2.12
RAB6A-206	ENST00000540771	TNN	Q9UQP3	1299 aa		28.27	■■■□□ 2.12
RAB6A-206	ENST00000540771	GRM8	O00222	908 aa		28.26	■■■□□ 2.11
RAB6A-206	ENST00000540771	INTS3	Q68E01	1043 aa	Known RBP	28.26	■■■□□ 2.11
RAB6A-206	ENST00000540771	C3orf67	Q6ZVT6	689 aa		28.26	■■■□□ 2.11
RAB6A-206	ENST00000540771	UBE3B	Q7Z3V4	1068 aa		28.26	■■■□□ 2.11
RAB6A-206	ENST00000540771	MASTL	Q96GX5	879 aa		28.25	■■■□□ 2.11
RAB6A-206	ENST00000540771	C9orf78	Q9NZ63	289 aa	Predicted RBP	28.25	■■■□□ 2.11
RAB6A-206	ENST00000540771	PIM2	Q9P1W9	311 aa		28.25	■■■□□ 2.11
RAB6A-206	ENST00000540771	NPR1	P16066	1061 aa		28.24	■■■□□ 2.11
RAB6A-206	ENST00000540771	STYK1	Q6J9G0	422 aa		28.24	■■■□□ 2.11
RAB6A-206	ENST00000540771	CLUAP1	Q96AJ1	413 aa		28.24	■■■□□ 2.11
RAB6A-206	ENST00000540771	UTY	O14607	1347 aa		28.23	■■■□□ 2.11
RAB6A-206	ENST00000540771	PDE8A	O60658	829 aa		28.23	■■■□□ 2.11
RAB6A-206	ENST00000540771	SF3B3	Q15393	1217 aa	Known RBP	28.23	■■■□□ 2.11
RAB6A-206	ENST00000540771	DZIP1L	Q8IYY4	767 aa	Known RBP	28.23	■■■□□ 2.11
RAB6A-206	ENST00000540771	TNRC6C	Q9HCJ0	1690 aa	Known RBP	28.23	■■■□□ 2.11
RAB6A-206	ENST00000540771	N4BP2	Q86UW6	1770 aa	Predicted RBP	28.22	■■■□□ 2.11
RAB6A-206	ENST00000540771	HOXA10	P31260	410 aa	Predicted RBP	28.22	■■■□□ 2.11
RAB6A-206	ENST00000540771	ZNF622	Q969S3	477 aa	Known RBP eCLIP	28.22	■■■□□ 2.11
RAB6A-206	ENST00000540771	PLA2G12B	Q9BX93	195 aa		28.22	■■■□□ 2.11
RAB6A-206	ENST00000540771	USP44	Q9H0E7	712 aa		28.22	■■■□□ 2.11
RAB6A-206	ENST00000540771	MS4A1	P11836	297 aa		28.2	■■■□□ 2.1
RAB6A-206	ENST00000540771	TTLL6	Q8N841	843 aa		28.2	■■■□□ 2.1
RAB6A-206	ENST00000540771	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	28.2	■■■□□ 2.1
RAB6A-206	ENST00000540771	RPGR	Q92834	1020 aa	Known RBP	28.2	■■■□□ 2.1
RAB6A-206	ENST00000540771	CNKSR1	Q969H4	720 aa		28.2	■■■□□ 2.1
RAB6A-206	ENST00000540771	DDX60	Q8IY21	1712 aa	Known RBP	28.19	■■■□□ 2.1
RAB6A-206	ENST00000540771	NBPF7	P0C2Y1	421 aa	Predicted RBP	28.19	■■■□□ 2.1
RAB6A-206	ENST00000540771	DALRD3	Q5D0E6	543 aa	Known RBP	28.19	■■■□□ 2.1
RAB6A-206	ENST00000540771	FTSJ3	Q8IY81	847 aa	Known RBP	28.19	■■■□□ 2.1
RAB6A-206	ENST00000540771	COL11A2	P13942	1736 aa	Predicted RBP	28.18	■■■□□ 2.1
RAB6A-206	ENST00000540771	ALDH1B1	P30837	517 aa		28.18	■■■□□ 2.1
RAB6A-206	ENST00000540771	TMEM57	Q8N5G2	664 aa		28.18	■■■□□ 2.1
RAB6A-206	ENST00000540771	RBM17	Q96I25	401 aa	Known RBP	28.18	■■■□□ 2.1
RAB6A-206	ENST00000540771	CRAMP1	Q96RY5	1269 aa		28.18	■■■□□ 2.1
RAB6A-206	ENST00000540771	PLIN1	O60240	522 aa		28.17	■■■□□ 2.1
RAB6A-206	ENST00000540771	RLBP1	P12271	317 aa		28.17	■■■□□ 2.1
RAB6A-206	ENST00000540771	WWC3	Q9ULE0	1092 aa		28.17	■■■□□ 2.1
RAB6A-206	ENST00000540771	DLEC1	Q9Y238	1755 aa		28.16	■■■□□ 2.1
RAB6A-206	ENST00000540771	CTSW	P56202	376 aa		28.16	■■■□□ 2.1
RAB6A-206	ENST00000540771	TTLL11	Q8NHH1	800 aa		28.16	■■■□□ 2.1
RAB6A-206	ENST00000540771	BCS1L	Q9Y276	419 aa		28.16	■■■□□ 2.1
RAB6A-206	ENST00000540771	LAMB2	P55268	1798 aa		28.16	■■■□□ 2.1
RAB6A-206	ENST00000540771	CCDC152	Q4G0S7	254 aa		28.15	■■■□□ 2.1

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