RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 SERPINB2P05120 415 aa13.47□□□□□ -0.25
ATL3-204ENST00000540699 TCIRG1Q13488 830 aa13.47□□□□□ -0.25
ATL3-204ENST00000540699 ISCA1Q9BUE6 129 aa13.47□□□□□ -0.25
ATL3-204ENST00000540699 LAMB2P55268 1798 aa13.47□□□□□ -0.25
ATL3-204ENST00000540699 KIF16BQ96L93 1317 aa13.46□□□□□ -0.25
ATL3-204ENST00000540699 TRIM28Q13263 835 aaKnown RBP13.46□□□□□ -0.25
ATL3-204ENST00000540699 PARP10Q53GL7 1025 aa13.46□□□□□ -0.25
ATL3-204ENST00000540699 KSR2Q6VAB6 950 aa13.46□□□□□ -0.25
ATL3-204ENST00000540699 BICDL1Q6ZP65 573 aa13.46□□□□□ -0.25
ATL3-204ENST00000540699 COL11A2P13942 1736 aaPredicted RBP13.46□□□□□ -0.25
ATL3-204ENST00000540699 RIC1Q4ADV7 1423 aa13.46□□□□□ -0.26
ATL3-204ENST00000540699 PI4KAP2A4QPH2 592 aa13.45□□□□□ -0.26
ATL3-204ENST00000540699 TGFB2P61812 414 aa13.45□□□□□ -0.26
ATL3-204ENST00000540699 ZKSCAN2Q63HK3 967 aa13.45□□□□□ -0.26
ATL3-204ENST00000540699 PRR5LQ6MZQ0 368 aa13.45□□□□□ -0.26
ATL3-204ENST00000540699 RIC3Q7Z5B4 369 aa13.45□□□□□ -0.26
ATL3-204ENST00000540699 PI4KAP1Q8N8J0 262 aa13.45□□□□□ -0.26
ATL3-204ENST00000540699 ZNF526Q8TF50 670 aaPredicted RBP13.45□□□□□ -0.26
ATL3-204ENST00000540699 METTL22Q9BUU2 404 aaPredicted RBP13.45□□□□□ -0.26
ATL3-204ENST00000540699 TNNQ9UQP3 1299 aa13.45□□□□□ -0.26
ATL3-204ENST00000540699 DDX60Q8IY21 1712 aaKnown RBP13.44□□□□□ -0.26
ATL3-204ENST00000540699 NTSR2O95665 410 aa13.44□□□□□ -0.26
ATL3-204ENST00000540699 RLBP1P12271 317 aa13.44□□□□□ -0.26
ATL3-204ENST00000540699 GPTP24298 496 aa13.44□□□□□ -0.26
ATL3-204ENST00000540699 NLRP10Q86W26 655 aa13.44□□□□□ -0.26
ATL3-204ENST00000540699 FRAT1Q92837 279 aaPredicted RBP13.44□□□□□ -0.26
ATL3-204ENST00000540699 NOB1Q9ULX3 412 aaKnown RBP13.44□□□□□ -0.26
ATL3-204ENST00000540699 MAP3K2Q9Y2U5 619 aa13.44□□□□□ -0.26
ATL3-204ENST00000540699 TNRC6CQ9HCJ0 1690 aaKnown RBP13.44□□□□□ -0.26
ATL3-204ENST00000540699 PTPRCP08575 1304 aa13.43□□□□□ -0.26
ATL3-204ENST00000540699 A0A0G2JLW4 131 aa13.43□□□□□ -0.26
ATL3-204ENST00000540699 TRIM27P14373 513 aa13.43□□□□□ -0.26
ATL3-204ENST00000540699 FKBP5Q13451 457 aaPredicted RBP13.43□□□□□ -0.26
ATL3-204ENST00000540699 SUSD4Q5VX71 490 aa13.43□□□□□ -0.26
ATL3-204ENST00000540699 ATF7IPQ6VMQ6 1270 aa13.43□□□□□ -0.26
ATL3-204ENST00000540699 TPTE2Q6XPS3 522 aa13.43□□□□□ -0.26
ATL3-204ENST00000540699 NBPF5PQ86XG9 351 aaPredicted RBP13.43□□□□□ -0.26
ATL3-204ENST00000540699 CNBD1Q8NA66 436 aa13.43□□□□□ -0.26
ATL3-204ENST00000540699 ARHGAP45Q92619 1136 aa13.43□□□□□ -0.26
ATL3-204ENST00000540699 NYXQ9GZU5 481 aa13.43□□□□□ -0.26
ATL3-204ENST00000540699 DPEP1P16444 411 aa13.42□□□□□ -0.26
ATL3-204ENST00000540699 PPP1R42Q7Z4L9 355 aa13.42□□□□□ -0.26
ATL3-204ENST00000540699 CCDC191Q8NCU4 936 aa13.42□□□□□ -0.26
ATL3-204ENST00000540699 PANK1Q8TE04 598 aa13.42□□□□□ -0.26
ATL3-204ENST00000540699 DNAAF4Q8WXU2 420 aa13.42□□□□□ -0.26
ATL3-204ENST00000540699 BRIP1Q9BX63 1249 aa13.42□□□□□ -0.26
ATL3-204ENST00000540699 MYH3P11055 1940 aa13.42□□□□□ -0.26
ATL3-204ENST00000540699 KIF3CO14782 793 aa13.41□□□□□ -0.26
ATL3-204ENST00000540699 IPO8O15397 1037 aaKnown RBP13.41□□□□□ -0.26
ATL3-204ENST00000540699 IGKV5-2P06315 115 aa13.41□□□□□ -0.26
ATL3-204ENST00000540699 MS4A1P11836 297 aa13.41□□□□□ -0.26
ATL3-204ENST00000540699 SLC10A5Q5PT55 438 aa13.41□□□□□ -0.26
ATL3-204ENST00000540699 MYD88Q99836 296 aa13.41□□□□□ -0.26
ATL3-204ENST00000540699 UTP14AQ9BVJ6 771 aaKnown RBP13.41□□□□□ -0.26
ATL3-204ENST00000540699 PDZRN3Q9UPQ7 1066 aa13.41□□□□□ -0.26
ATL3-204ENST00000540699 BCS1LQ9Y276 419 aa13.41□□□□□ -0.26
ATL3-204ENST00000540699 ABCC12Q96J65 1359 aa13.41□□□□□ -0.26
ATL3-204ENST00000540699 SBF1O95248 1867 aa13.4□□□□□ -0.26
ATL3-204ENST00000540699 KLRG2A4D1S0 409 aaPredicted RBP13.4□□□□□ -0.26
ATL3-204ENST00000540699 ATP5J2-PTCD1G3V325 749 aa13.4□□□□□ -0.26
ATL3-204ENST00000540699 KCNA3P22001 575 aa13.4□□□□□ -0.26
ATL3-204ENST00000540699 APLP1P51693 650 aa13.4□□□□□ -0.26
ATL3-204ENST00000540699 ST5P78524 1137 aa13.4□□□□□ -0.26
ATL3-204ENST00000540699 DZIP1LQ8IYY4 767 aaKnown RBP13.4□□□□□ -0.26
ATL3-204ENST00000540699 CACNA1SQ13698 1873 aa13.4□□□□□ -0.26
ATL3-204ENST00000540699 ABCC4O15439 1325 aa13.39□□□□□ -0.27
ATL3-204ENST00000540699 NEURL1BA8MQ27 555 aa13.39□□□□□ -0.27
ATL3-204ENST00000540699 F6X3S4 739 aa13.39□□□□□ -0.27
ATL3-204ENST00000540699 PDE6BP35913 854 aa13.39□□□□□ -0.27
ATL3-204ENST00000540699 NEXNQ0ZGT2 675 aa13.39□□□□□ -0.27
ATL3-204ENST00000540699 ERFEQ4G0M1 354 aa13.39□□□□□ -0.27
ATL3-204ENST00000540699 B4GALNT3Q6L9W6 998 aa13.39□□□□□ -0.27
ATL3-204ENST00000540699 LINS1Q8NG48 757 aa13.39□□□□□ -0.27
ATL3-204ENST00000540699 CWC25Q9NXE8 425 aaPredicted RBP13.39□□□□□ -0.27
ATL3-204ENST00000540699 COG6Q9Y2V7 657 aa13.39□□□□□ -0.27
ATL3-204ENST00000540699 SH3TC1Q8TE82 1336 aa13.39□□□□□ -0.27
ATL3-204ENST00000540699 FAM177BA6PVY3 158 aa13.38□□□□□ -0.27
ATL3-204ENST00000540699 MVPQ14764 893 aaKnown RBP13.38□□□□□ -0.27
ATL3-204ENST00000540699 BEND3Q5T5X7 828 aa13.38□□□□□ -0.27
ATL3-204ENST00000540699 NUTM1Q86Y26 1132 aa13.38□□□□□ -0.27
ATL3-204ENST00000540699 DNAJC5GQ8N7S2 189 aa13.38□□□□□ -0.27
ATL3-204ENST00000540699 CLUAP1Q96AJ1 413 aa13.38□□□□□ -0.27
ATL3-204ENST00000540699 TRMT112Q9UI30 125 aaKnown RBP13.38□□□□□ -0.27
ATL3-204ENST00000540699 TOMM70O94826 608 aa13.37□□□□□ -0.27
ATL3-204ENST00000540699 PCCAP05165 728 aaPredicted RBP13.37□□□□□ -0.27
ATL3-204ENST00000540699 AAMPQ13685 434 aa13.37□□□□□ -0.27
ATL3-204ENST00000540699 GCKRQ14397 625 aa13.37□□□□□ -0.27
ATL3-204ENST00000540699 CRY2Q49AN0 593 aa13.37□□□□□ -0.27
ATL3-204ENST00000540699 ARHGAP27Q6ZUM4 889 aa13.37□□□□□ -0.27
ATL3-204ENST00000540699 FTSJ3Q8IY81 847 aaKnown RBP13.37□□□□□ -0.27
ATL3-204ENST00000540699 CCDC24Q8N4L8 307 aa13.37□□□□□ -0.27
ATL3-204ENST00000540699 ZBTB38Q8NAP3 1195 aaPredicted RBP13.37□□□□□ -0.27
ATL3-204ENST00000540699 API5Q9BZZ5 524 aaKnown RBP13.37□□□□□ -0.27
ATL3-204ENST00000540699 CDHR2Q9BYE9 1310 aa13.37□□□□□ -0.27
ATL3-204ENST00000540699 H0YIN7 160 aa13.36□□□□□ -0.27
ATL3-204ENST00000540699 H7C1W4 665 aa13.36□□□□□ -0.27
ATL3-204ENST00000540699 NPHP1O15259 732 aa13.36□□□□□ -0.27
ATL3-204ENST00000540699 ALDH1L1O75891 902 aa13.36□□□□□ -0.27
ATL3-204ENST00000540699 SRGNP10124 158 aa13.36□□□□□ -0.27
ATL3-204ENST00000540699 GTF2E1P29083 439 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms