RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ARHGEF25Q86VW2 580 aa14.68□□□□□ -0.06
NPC1-202ENST00000540608 MYRIPQ8NFW9 859 aa14.68□□□□□ -0.06
NPC1-202ENST00000540608 MAP4K1Q92918 833 aa14.68□□□□□ -0.06
NPC1-202ENST00000540608 PA2G4Q9UQ80 394 aaKnown RBP14.68□□□□□ -0.06
NPC1-202ENST00000540608 PROSER3Q2NL68 480 aa14.67□□□□□ -0.06
NPC1-202ENST00000540608 MPNDQ8N594 471 aa14.67□□□□□ -0.06
NPC1-202ENST00000540608 PRIMPOLQ96LW4 560 aa14.67□□□□□ -0.06
NPC1-202ENST00000540608 TTC12Q9H892 705 aaPredicted RBP14.67□□□□□ -0.06
NPC1-202ENST00000540608 SNRKQ9NRH2 765 aa14.67□□□□□ -0.06
NPC1-202ENST00000540608 RBM8AQ9Y5S9 174 aaKnown RBP14.67□□□□□ -0.06
NPC1-202ENST00000540608 PRAMEF22A3QJZ6 481 aa14.67□□□□□ -0.06
NPC1-202ENST00000540608 DNTTIP2Q5QJE6 756 aaKnown RBP14.67□□□□□ -0.06
NPC1-202ENST00000540608 SPTLC3Q9NUV7 552 aa14.67□□□□□ -0.06
NPC1-202ENST00000540608 TPCN1Q9ULQ1 816 aa14.67□□□□□ -0.06
NPC1-202ENST00000540608 GIGYF1O75420 1035 aaPredicted RBP14.66□□□□□ -0.06
NPC1-202ENST00000540608 PSMA5P28066 241 aa14.66□□□□□ -0.06
NPC1-202ENST00000540608 AMOTQ4VCS5 1084 aa14.66□□□□□ -0.06
NPC1-202ENST00000540608 C1orf141Q5JVX7 400 aa14.66□□□□□ -0.06
NPC1-202ENST00000540608 LMOD2Q6P5Q4 547 aa14.66□□□□□ -0.06
NPC1-202ENST00000540608 VPS37CA5D8V6 355 aaPredicted RBP14.66□□□□□ -0.06
NPC1-202ENST00000540608 NECAB1Q8N987 351 aa14.66□□□□□ -0.06
NPC1-202ENST00000540608 ANKRD24Q8TF21 1146 aa14.66□□□□□ -0.06
NPC1-202ENST00000540608 CWF19L2Q2TBE0 894 aaKnown RBP14.65□□□□□ -0.06
NPC1-202ENST00000540608 LARP1BQ659C4 914 aaKnown RBP14.65□□□□□ -0.06
NPC1-202ENST00000540608 AXIN2Q9Y2T1 843 aa14.65□□□□□ -0.06
NPC1-202ENST00000540608 UTYO14607 1347 aa14.65□□□□□ -0.06
NPC1-202ENST00000540608 HEG1Q9ULI3 1381 aa14.65□□□□□ -0.06
NPC1-202ENST00000540608 NCAPD2Q15021 1401 aa14.65□□□□□ -0.06
NPC1-202ENST00000540608 SASH1O94885 1247 aa14.65□□□□□ -0.06
NPC1-202ENST00000540608 KCNJ4P48050 445 aa14.65□□□□□ -0.06
NPC1-202ENST00000540608 HMGN5P82970 282 aaKnown RBP14.65□□□□□ -0.06
NPC1-202ENST00000540608 NMIQ13287 307 aaPredicted RBP14.65□□□□□ -0.06
NPC1-202ENST00000540608 FAM227BQ96M60 508 aa14.65□□□□□ -0.06
NPC1-202ENST00000540608 ALDH8A1Q9H2A2 487 aaPredicted RBP14.65□□□□□ -0.06
NPC1-202ENST00000540608 SLIT3O75094 1523 aa14.64□□□□□ -0.07
NPC1-202ENST00000540608 SLC27A2O14975 620 aa14.64□□□□□ -0.07
NPC1-202ENST00000540608 TPM3P06753 285 aa14.64□□□□□ -0.07
NPC1-202ENST00000540608 CCDC192P0DO97 292 aa14.64□□□□□ -0.07
NPC1-202ENST00000540608 G3BP1Q13283 466 aaKnown RBP eCLIP14.64□□□□□ -0.07
NPC1-202ENST00000540608 LINS1Q8NG48 757 aa14.64□□□□□ -0.07
NPC1-202ENST00000540608 EAF2Q96CJ1 260 aaPredicted RBP14.64□□□□□ -0.07
NPC1-202ENST00000540608 ELP1O95163 1332 aa14.64□□□□□ -0.07
NPC1-202ENST00000540608 GRM8O00222 908 aa14.64□□□□□ -0.07
NPC1-202ENST00000540608 AP5Z1O43299 807 aa14.64□□□□□ -0.07
NPC1-202ENST00000540608 DTNBO60941 627 aa14.64□□□□□ -0.07
NPC1-202ENST00000540608 PDCP20941 246 aa14.64□□□□□ -0.07
NPC1-202ENST00000540608 KRT85P78386 507 aa14.64□□□□□ -0.07
NPC1-202ENST00000540608 ANKRD1Q15327 319 aa14.64□□□□□ -0.07
NPC1-202ENST00000540608 DDX54Q8TDD1 881 aaKnown RBP14.64□□□□□ -0.07
NPC1-202ENST00000540608 KAZALD1Q96I82 304 aa14.64□□□□□ -0.07
NPC1-202ENST00000540608 OVOS2A0A0G2JMS6 1433 aa14.64□□□□□ -0.07
NPC1-202ENST00000540608 SUCLG2Q96I99 432 aa14.63□□□□□ -0.07
NPC1-202ENST00000540608 RNF20Q5VTR2 975 aa14.63□□□□□ -0.07
NPC1-202ENST00000540608 GTF2F1P35269 517 aaKnown RBP eCLIP14.62□□□□□ -0.07
NPC1-202ENST00000540608 TTC6Q86TZ1 520 aa14.62□□□□□ -0.07
NPC1-202ENST00000540608 CCDC8Q9H0W5 538 aaPredicted RBP14.62□□□□□ -0.07
NPC1-202ENST00000540608 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.62□□□□□ -0.07
NPC1-202ENST00000540608 PLCB2Q00722 1185 aa14.62□□□□□ -0.07
NPC1-202ENST00000540608 BLOC1S2Q6QNY1 142 aa14.62□□□□□ -0.07
NPC1-202ENST00000540608 BICC1Q9H694 974 aaKnown RBP14.62□□□□□ -0.07
NPC1-202ENST00000540608 DDX58O95786 925 aaKnown RBP14.62□□□□□ -0.07
NPC1-202ENST00000540608 C17orf53Q8N3J3 647 aaPredicted RBP14.62□□□□□ -0.07
NPC1-202ENST00000540608 RPS6KB1P23443 525 aa14.61□□□□□ -0.07
NPC1-202ENST00000540608 CDC37L1Q7L3B6 337 aa14.61□□□□□ -0.07
NPC1-202ENST00000540608 KIAA1524Q8TCG1 905 aa14.61□□□□□ -0.07
NPC1-202ENST00000540608 NPHP4O75161 1426 aaPredicted RBP14.61□□□□□ -0.07
NPC1-202ENST00000540608 A0A0D9SFI3 127 aa14.61□□□□□ -0.07
NPC1-202ENST00000540608 MAP3K11Q16584 847 aa14.61□□□□□ -0.07
NPC1-202ENST00000540608 TSGA10IPQ3SY00 556 aa14.61□□□□□ -0.07
NPC1-202ENST00000540608 FAM200AQ8TCP9 573 aa14.6□□□□□ -0.07
NPC1-202ENST00000540608 FSD1Q9BTV5 496 aa14.6□□□□□ -0.07
NPC1-202ENST00000540608 SCAND2PQ9GZW5 306 aaPredicted RBP14.6□□□□□ -0.07
NPC1-202ENST00000540608 NUP62CLQ9H1M0 184 aa14.6□□□□□ -0.07
NPC1-202ENST00000540608 BOLA2Q9H3K6 86 aa14.6□□□□□ -0.07
NPC1-202ENST00000540608 DDX21Q9NR30 783 aaKnown RBP eCLIP14.6□□□□□ -0.07
NPC1-202ENST00000540608 MED23Q9ULK4 1368 aa14.6□□□□□ -0.07
NPC1-202ENST00000540608 CAMTA1Q9Y6Y1 1673 aa14.6□□□□□ -0.07
NPC1-202ENST00000540608 GOLGA6L6A8MZA4 724 aa14.6□□□□□ -0.07
NPC1-202ENST00000540608 COL9A3Q14050 684 aaPredicted RBP14.6□□□□□ -0.07
NPC1-202ENST00000540608 KCNF1Q9H3M0 494 aa14.6□□□□□ -0.07
NPC1-202ENST00000540608 TLR7Q9NYK1 1049 aaKnown RBP14.6□□□□□ -0.07
NPC1-202ENST00000540608 HMG20BQ9P0W2 317 aa14.6□□□□□ -0.07
NPC1-202ENST00000540608 SIPA1L3O60292 1781 aaPredicted RBP14.59□□□□□ -0.07
NPC1-202ENST00000540608 TRPM3Q9HCF6 1732 aaPredicted RBP14.59□□□□□ -0.07
NPC1-202ENST00000540608 LIG1P18858 919 aa14.59□□□□□ -0.07
NPC1-202ENST00000540608 TOB2Q14106 344 aaPredicted RBP14.59□□□□□ -0.07
NPC1-202ENST00000540608 KRT28Q7Z3Y7 464 aa14.59□□□□□ -0.07
NPC1-202ENST00000540608 FERMT3Q86UX7 667 aa14.59□□□□□ -0.07
NPC1-202ENST00000540608 AIMP1Q12904 312 aaKnown RBP14.59□□□□□ -0.07
NPC1-202ENST00000540608 PKNOX2Q96KN3 472 aa14.59□□□□□ -0.07
NPC1-202ENST00000540608 MRVI1Q9Y6F6 885 aa14.59□□□□□ -0.07
NPC1-202ENST00000540608 JCADQ9P266 1359 aa14.59□□□□□ -0.07
NPC1-202ENST00000540608 RGPD5Q99666 1765 aa14.59□□□□□ -0.07
NPC1-202ENST00000540608 LMTK3Q96Q04 1460 aa14.58□□□□□ -0.07
NPC1-202ENST00000540608 TYRO3Q06418 890 aa14.58□□□□□ -0.07
NPC1-202ENST00000540608 PDIA6Q15084 440 aa14.58□□□□□ -0.07
NPC1-202ENST00000540608 FAM173BQ6P4H8 233 aa14.58□□□□□ -0.07
NPC1-202ENST00000540608 ZC3H6P61129 1189 aaKnown RBP14.58□□□□□ -0.08
NPC1-202ENST00000540608 IGKV5-2P06315 115 aa14.57□□□□□ -0.08
NPC1-202ENST00000540608 CAMK4Q16566 473 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms