RNA–Protein interactions for RNA: ENST00000540476.5

MDM1-211, Transcript of Mdm1 nuclear protein, humanhuman

TSL 4

Gene MDM1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-211ENST00000540476 ABHD8Q96I13 439 aa12.88□□□□□ -0.35
MDM1-211ENST00000540476 DDX21Q9NR30 783 aaKnown RBP eCLIP12.88□□□□□ -0.35
MDM1-211ENST00000540476 GJA3Q9Y6H8 435 aa12.88□□□□□ -0.35
MDM1-211ENST00000540476 DICER1Q9UPY3 1922 aaKnown RBP12.88□□□□□ -0.35
MDM1-211ENST00000540476 CCDC88AQ3V6T2 1871 aa12.87□□□□□ -0.35
MDM1-211ENST00000540476 COL3A1P02461 1466 aaPredicted RBP12.87□□□□□ -0.35
MDM1-211ENST00000540476 HTATSF1O43719 755 aaKnown RBP12.87□□□□□ -0.35
MDM1-211ENST00000540476 PHACTR3Q96KR7 559 aa12.87□□□□□ -0.35
MDM1-211ENST00000540476 RSPH6AQ9H0K4 717 aa12.87□□□□□ -0.35
MDM1-211ENST00000540476 SLX4Q8IY92 1834 aa12.87□□□□□ -0.35
MDM1-211ENST00000540476 NEFMP07197 916 aa12.86□□□□□ -0.35
MDM1-211ENST00000540476 CRY2Q49AN0 593 aa12.86□□□□□ -0.35
MDM1-211ENST00000540476 OLFM4Q6UX06 510 aa12.86□□□□□ -0.35
MDM1-211ENST00000540476 USP50Q70EL3 339 aaPredicted RBP12.86□□□□□ -0.35
MDM1-211ENST00000540476 LARGE2Q8N3Y3 721 aa12.86□□□□□ -0.35
MDM1-211ENST00000540476 CAPNS2Q96L46 248 aa12.86□□□□□ -0.35
MDM1-211ENST00000540476 PRAMEF22A3QJZ6 481 aa12.85□□□□□ -0.35
MDM1-211ENST00000540476 NBPF26B4DH59 902 aa12.85□□□□□ -0.35
MDM1-211ENST00000540476 ERVV-1B6SEH8 477 aa12.85□□□□□ -0.35
MDM1-211ENST00000540476 U2AF1L5P0DN76 240 aaPredicted RBP12.85□□□□□ -0.35
MDM1-211ENST00000540476 DSG3P32926 999 aa12.85□□□□□ -0.35
MDM1-211ENST00000540476 U2AF1Q01081 240 aaKnown RBP eCLIP12.85□□□□□ -0.35
MDM1-211ENST00000540476 NBPF10Q6P3W6 841 aaKnown RBP12.85□□□□□ -0.35
MDM1-211ENST00000540476 KIF6Q6ZMV9 814 aa12.85□□□□□ -0.35
MDM1-211ENST00000540476 MCM10Q7L590 875 aa12.85□□□□□ -0.35
MDM1-211ENST00000540476 NBPF15Q8N660 670 aa12.85□□□□□ -0.35
MDM1-211ENST00000540476 RBM17Q96I25 401 aaKnown RBP12.85□□□□□ -0.35
MDM1-211ENST00000540476 GPR101Q96P66 508 aaPredicted RBP12.85□□□□□ -0.35
MDM1-211ENST00000540476 CA12O43570 354 aa12.84□□□□□ -0.35
MDM1-211ENST00000540476 GRM1Q13255 1194 aa12.84□□□□□ -0.35
MDM1-211ENST00000540476 TAF7Q15545 349 aaPredicted RBP12.84□□□□□ -0.35
MDM1-211ENST00000540476 HLFQ16534 295 aa12.84□□□□□ -0.35
MDM1-211ENST00000540476 FAM161AQ3B820 660 aa12.84□□□□□ -0.35
MDM1-211ENST00000540476 NIM1KQ8IY84 436 aa12.84□□□□□ -0.35
MDM1-211ENST00000540476 PNISRQ8TF01 805 aaKnown RBP12.84□□□□□ -0.35
MDM1-211ENST00000540476 SLC34A2O95436 690 aa12.83□□□□□ -0.36
MDM1-211ENST00000540476 HOXA10P31260 410 aaPredicted RBP12.83□□□□□ -0.36
MDM1-211ENST00000540476 MAP2K2P36507 400 aa12.83□□□□□ -0.36
MDM1-211ENST00000540476 MLLT1Q03111 559 aaPredicted RBP12.83□□□□□ -0.36
MDM1-211ENST00000540476 VPS33BQ9H267 617 aa12.83□□□□□ -0.36
MDM1-211ENST00000540476 ARFGEF2Q9Y6D5 1785 aa12.83□□□□□ -0.36
MDM1-211ENST00000540476 BCORQ6W2J9 1755 aa12.82□□□□□ -0.36
MDM1-211ENST00000540476 CCDC85CA6NKD9 419 aa12.82□□□□□ -0.36
MDM1-211ENST00000540476 PPEF1O14829 653 aaPredicted RBP12.82□□□□□ -0.36
MDM1-211ENST00000540476 SCNN1DP51172 638 aa12.82□□□□□ -0.36
MDM1-211ENST00000540476 NUTM1Q86Y26 1132 aa12.82□□□□□ -0.36
MDM1-211ENST00000540476 NGEFQ8N5V2 710 aa12.82□□□□□ -0.36
MDM1-211ENST00000540476 SUPT20HQ8NEM7 779 aa12.82□□□□□ -0.36
MDM1-211ENST00000540476 CRAMP1Q96RY5 1269 aa12.82□□□□□ -0.36
MDM1-211ENST00000540476 ADARB2Q9NS39 739 aaKnown RBP12.82□□□□□ -0.36
MDM1-211ENST00000540476 MAP3K15Q6ZN16 1313 aa12.82□□□□□ -0.36
MDM1-211ENST00000540476 IBTKQ9P2D0 1353 aaPredicted RBP12.81□□□□□ -0.36
MDM1-211ENST00000540476 PPIP5K2O43314 1243 aa12.81□□□□□ -0.36
MDM1-211ENST00000540476 EPS15P42566 896 aa12.81□□□□□ -0.36
MDM1-211ENST00000540476 CYP4F22Q6NT55 531 aa12.81□□□□□ -0.36
MDM1-211ENST00000540476 TLL2Q9Y6L7 1015 aa12.81□□□□□ -0.36
MDM1-211ENST00000540476 RIC1Q4ADV7 1423 aa12.8□□□□□ -0.36
MDM1-211ENST00000540476 SIPA1L3O60292 1781 aaPredicted RBP12.8□□□□□ -0.36
MDM1-211ENST00000540476 ADAMTSL1Q8N6G6 1762 aa12.8□□□□□ -0.36
MDM1-211ENST00000540476 DCTN1Q14203 1278 aa12.8□□□□□ -0.36
MDM1-211ENST00000540476 PPP1R42Q7Z4L9 355 aa12.8□□□□□ -0.36
MDM1-211ENST00000540476 NLRP3Q96P20 1036 aa12.8□□□□□ -0.36
MDM1-211ENST00000540476 RRP7AQ9Y3A4 280 aaKnown RBP12.8□□□□□ -0.36
MDM1-211ENST00000540476 VIRMAQ69YN4 1812 aaKnown RBP12.8□□□□□ -0.36
MDM1-211ENST00000540476 ABCC12Q96J65 1359 aa12.8□□□□□ -0.36
MDM1-211ENST00000540476 GPTP24298 496 aa12.79□□□□□ -0.36
MDM1-211ENST00000540476 PARP10Q53GL7 1025 aa12.79□□□□□ -0.36
MDM1-211ENST00000540476 HHIPL1Q96JK4 782 aa12.79□□□□□ -0.36
MDM1-211ENST00000540476 GPRC5DQ9NZD1 345 aa12.79□□□□□ -0.36
MDM1-211ENST00000540476 SNED1Q8TER0 1413 aa12.79□□□□□ -0.36
MDM1-211ENST00000540476 TRAF5O00463 557 aa12.78□□□□□ -0.36
MDM1-211ENST00000540476 TCERG1O14776 1098 aaKnown RBP12.78□□□□□ -0.36
MDM1-211ENST00000540476 CELF2O95319 508 aaKnown RBP12.78□□□□□ -0.36
MDM1-211ENST00000540476 MYL6BP14649 208 aa12.78□□□□□ -0.36
MDM1-211ENST00000540476 RGS19P49795 217 aa12.78□□□□□ -0.36
MDM1-211ENST00000540476 CST9Q5W186 159 aa12.78□□□□□ -0.36
MDM1-211ENST00000540476 SAPCD2Q86UD0 394 aa12.78□□□□□ -0.36
MDM1-211ENST00000540476 ZC3H15Q8WU90 426 aaKnown RBP12.78□□□□□ -0.36
MDM1-211ENST00000540476 CFAP44Q96MT7 982 aa12.78□□□□□ -0.36
MDM1-211ENST00000540476 ZBTB3Q9H5J0 574 aa12.78□□□□□ -0.36
MDM1-211ENST00000540476 MIS18AQ9NYP9 233 aa12.78□□□□□ -0.36
MDM1-211ENST00000540476 ZNRF3Q9ULT6 936 aa12.78□□□□□ -0.36
MDM1-211ENST00000540476 CDHR2Q9BYE9 1310 aa12.78□□□□□ -0.36
MDM1-211ENST00000540476 BRPF1P55201 1214 aaPredicted RBP12.77□□□□□ -0.37
MDM1-211ENST00000540476 TNIP1Q15025 636 aa12.77□□□□□ -0.37
MDM1-211ENST00000540476 AOC3Q16853 763 aa12.77□□□□□ -0.37
MDM1-211ENST00000540476 SUSD4Q5VX71 490 aa12.77□□□□□ -0.37
MDM1-211ENST00000540476 GIGYF2Q6Y7W6 1299 aaKnown RBP12.77□□□□□ -0.37
MDM1-211ENST00000540476 BCL2L13Q9BXK5 485 aa12.77□□□□□ -0.37
MDM1-211ENST00000540476 ATP6V0A2Q9Y487 856 aa12.77□□□□□ -0.37
MDM1-211ENST00000540476 ERBB4Q15303 1308 aa12.77□□□□□ -0.37
MDM1-211ENST00000540476 CACNA1SQ13698 1873 aa12.76□□□□□ -0.37
MDM1-211ENST00000540476 BBOX1O75936 387 aa12.76□□□□□ -0.37
MDM1-211ENST00000540476 NTSR2O95665 410 aa12.76□□□□□ -0.37
MDM1-211ENST00000540476 PPP2R1AP30153 589 aa12.76□□□□□ -0.37
MDM1-211ENST00000540476 FMR1Q06787 632 aaKnown RBP eCLIP12.76□□□□□ -0.37
MDM1-211ENST00000540476 CIAPIN1Q6FI81 312 aa12.76□□□□□ -0.37
MDM1-211ENST00000540476 DPP8Q6V1X1 898 aaPredicted RBP12.76□□□□□ -0.37
MDM1-211ENST00000540476 TTLL7Q6ZT98 887 aa12.76□□□□□ -0.37
MDM1-211ENST00000540476 CDC37L1Q7L3B6 337 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms