RNA–Protein interactions for RNA: ENST00000540430.5

LDHA-218, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-218ENST00000540430 ATP6V1AP38606 617 aa11.33□□□□□ -0.6
LDHA-218ENST00000540430 UVSSAQ2YD98 709 aa11.33□□□□□ -0.6
LDHA-218ENST00000540430 PLEKHO1Q53GL0 409 aaPredicted RBP11.33□□□□□ -0.6
LDHA-218ENST00000540430 FAM184AQ8NB25 1140 aa11.33□□□□□ -0.6
LDHA-218ENST00000540430 DCAF5Q96JK2 942 aa11.33□□□□□ -0.6
LDHA-218ENST00000540430 ATG3Q9NT62 314 aa11.33□□□□□ -0.6
LDHA-218ENST00000540430 PTMAP06454 111 aaKnown RBP11.32□□□□□ -0.6
LDHA-218ENST00000540430 YBX3P16989 372 aaKnown RBP eCLIP11.32□□□□□ -0.61e-29■■□□□ 11.8
LDHA-218ENST00000540430 ITPK1Q13572 414 aa11.32□□□□□ -0.6
LDHA-218ENST00000540430 AMOTQ4VCS5 1084 aa11.32□□□□□ -0.6
LDHA-218ENST00000540430 DNTTIP2Q5QJE6 756 aaKnown RBP11.32□□□□□ -0.6
LDHA-218ENST00000540430 SYAP1Q96A49 352 aaPredicted RBP11.32□□□□□ -0.6
LDHA-218ENST00000540430 ZNF830Q96NB3 372 aaPredicted RBP11.32□□□□□ -0.6
LDHA-218ENST00000540430 ARID3AQ99856 593 aa11.32□□□□□ -0.6
LDHA-218ENST00000540430 ST18O60284 1047 aa11.32□□□□□ -0.6
LDHA-218ENST00000540430 MTHFSP49914 203 aa11.32□□□□□ -0.6
LDHA-218ENST00000540430 ANKRD45Q5TZF3 282 aa11.32□□□□□ -0.6
LDHA-218ENST00000540430 SPTLC3Q9NUV7 552 aa11.32□□□□□ -0.6
LDHA-218ENST00000540430 ZNF831Q5JPB2 1677 aa11.32□□□□□ -0.6
LDHA-218ENST00000540430 KDRP35968 1356 aa11.31□□□□□ -0.6
LDHA-218ENST00000540430 GNPATO15228 680 aa11.31□□□□□ -0.6
LDHA-218ENST00000540430 FKBP5Q13451 457 aaPredicted RBP11.31□□□□□ -0.6
LDHA-218ENST00000540430 NOLC1Q14978 699 aaKnown RBP eCLIP11.31□□□□□ -0.61e-17■■■□□ 17.3
LDHA-218ENST00000540430 TSPY26PQ9H489 355 aa11.31□□□□□ -0.6
LDHA-218ENST00000540430 RBM27Q9P2N5 1060 aaKnown RBP11.31□□□□□ -0.6
LDHA-218ENST00000540430 ZNF530Q6P9A1 599 aaPredicted RBP11.31□□□□□ -0.6
LDHA-218ENST00000540430 SMIM5Q71RC9 77 aa11.31□□□□□ -0.6
LDHA-218ENST00000540430 TSR2Q969E8 191 aaKnown RBP11.31□□□□□ -0.6
LDHA-218ENST00000540430 CBX1P83916 185 aa11.3□□□□□ -0.6
LDHA-218ENST00000540430 ZDHHC9Q9Y397 364 aa11.3□□□□□ -0.6
LDHA-218ENST00000540430 KDM6AO15550 1401 aaPredicted RBP11.3□□□□□ -0.6
LDHA-218ENST00000540430 PKP1Q13835 747 aa11.3□□□□□ -0.6
LDHA-218ENST00000540430 FEZ1Q99689 392 aa11.3□□□□□ -0.6
LDHA-218ENST00000540430 USP26Q9BXU7 913 aa11.3□□□□□ -0.6
LDHA-218ENST00000540430 ZBTB7BO15156 539 aaPredicted RBP11.29□□□□□ -0.6
LDHA-218ENST00000540430 ATP2B3Q16720 1220 aa11.29□□□□□ -0.6
LDHA-218ENST00000540430 PAXIP1Q6ZW49 1069 aaPredicted RBP11.29□□□□□ -0.6
LDHA-218ENST00000540430 AEBP1Q8IUX7 1158 aa11.29□□□□□ -0.6
LDHA-218ENST00000540430 ARHGAP45Q92619 1136 aa11.29□□□□□ -0.6
LDHA-218ENST00000540430 U2AF1L5P0DN76 240 aaPredicted RBP11.29□□□□□ -0.6
LDHA-218ENST00000540430 CABP4P57796 275 aa11.29□□□□□ -0.6
LDHA-218ENST00000540430 C1QTNF8P60827 252 aa11.29□□□□□ -0.6
LDHA-218ENST00000540430 U2AF1Q01081 240 aaKnown RBP eCLIP11.29□□□□□ -0.6
LDHA-218ENST00000540430 C1orf141Q5JVX7 400 aa11.29□□□□□ -0.6
LDHA-218ENST00000540430 SLC4A9Q96Q91 983 aa11.29□□□□□ -0.6
LDHA-218ENST00000540430 DIAPH3Q9NSV4 1193 aa11.29□□□□□ -0.6
LDHA-218ENST00000540430 RTCBQ9Y3I0 505 aaKnown RBP11.29□□□□□ -0.6
LDHA-218ENST00000540430 IL13P35225 146 aa11.28□□□□□ -0.6
LDHA-218ENST00000540430 TMPOP42166 694 aaKnown RBP11.28□□□□□ -0.6
LDHA-218ENST00000540430 RC3H1Q5TC82 1133 aaKnown RBP11.28□□□□□ -0.6
LDHA-218ENST00000540430 SULT6B1Q6IMI4 303 aa11.28□□□□□ -0.6
LDHA-218ENST00000540430 PDCL2Q8N4E4 241 aa11.28□□□□□ -0.6
LDHA-218ENST00000540430 ANKRD7Q92527 254 aa11.28□□□□□ -0.6
LDHA-218ENST00000540430 PLEKHF1Q96S99 279 aa11.28□□□□□ -0.6
LDHA-218ENST00000540430 TRIM35Q9UPQ4 493 aa11.28□□□□□ -0.6
LDHA-218ENST00000540430 COL5A3P25940 1745 aaPredicted RBP11.28□□□□□ -0.6
LDHA-218ENST00000540430 ADRA2BP18089 450 aa11.27□□□□□ -0.6
LDHA-218ENST00000540430 TRAPPC3LQ5T215 181 aa11.27□□□□□ -0.6
LDHA-218ENST00000540430 INTS3Q68E01 1043 aaKnown RBP11.27□□□□□ -0.6
LDHA-218ENST00000540430 BCL2L12Q9HB09 334 aa11.27□□□□□ -0.6
LDHA-218ENST00000540430 CNTNAP4Q9C0A0 1308 aa11.27□□□□□ -0.61
LDHA-218ENST00000540430 GIGYF1O75420 1035 aaPredicted RBP11.27□□□□□ -0.61
LDHA-218ENST00000540430 MMP10P09238 476 aa11.26□□□□□ -0.61
LDHA-218ENST00000540430 GSPT1P15170 499 aaKnown RBP11.26□□□□□ -0.61
LDHA-218ENST00000540430 RNF214Q8ND24 703 aa11.26□□□□□ -0.61
LDHA-218ENST00000540430 MCM2P49736 904 aa11.26□□□□□ -0.61
LDHA-218ENST00000540430 NLGN1Q8N2Q7 840 aa11.26□□□□□ -0.61
LDHA-218ENST00000540430 NSFL1CQ9UNZ2 370 aaKnown RBP11.26□□□□□ -0.61
LDHA-218ENST00000540430 CTIFO43310 598 aaKnown RBP11.25□□□□□ -0.61
LDHA-218ENST00000540430 RPS6KA4O75676 772 aa11.25□□□□□ -0.61
LDHA-218ENST00000540430 BRD1O95696 1058 aa11.25□□□□□ -0.61
LDHA-218ENST00000540430 TPM3P06753 285 aa11.25□□□□□ -0.61
LDHA-218ENST00000540430 CHAF1AQ13111 956 aaPredicted RBP11.25□□□□□ -0.61
LDHA-218ENST00000540430 SYCP1Q15431 976 aa11.25□□□□□ -0.61
LDHA-218ENST00000540430 TTC22Q5TAA0 569 aa11.25□□□□□ -0.61
LDHA-218ENST00000540430 CASC1Q6TDU7 716 aa11.25□□□□□ -0.61
LDHA-218ENST00000540430 ZGPATQ8N5A5 531 aaKnown RBP11.25□□□□□ -0.61
LDHA-218ENST00000540430 NFATC2IPQ8NCF5 419 aa11.25□□□□□ -0.61
LDHA-218ENST00000540430 VGLL3A8MV65 326 aa11.25□□□□□ -0.61
LDHA-218ENST00000540430 GABPB1Q06547 395 aaPredicted RBP11.25□□□□□ -0.61
LDHA-218ENST00000540430 PLEKHM2Q8IWE5 1019 aa11.25□□□□□ -0.61
LDHA-218ENST00000540430 ARHGEF1Q92888 912 aaKnown RBP11.25□□□□□ -0.61
LDHA-218ENST00000540430 MYH14Q7Z406 1995 aaKnown RBP11.25□□□□□ -0.61
LDHA-218ENST00000540430 SCN11AQ9UI33 1791 aa11.25□□□□□ -0.61
LDHA-218ENST00000540430 KIF13BQ9NQT8 1826 aa11.24□□□□□ -0.61
LDHA-218ENST00000540430 PTCD1O75127 700 aaKnown RBP11.24□□□□□ -0.61
LDHA-218ENST00000540430 SLC20A2Q08357 652 aa11.24□□□□□ -0.61
LDHA-218ENST00000540430 AKAP4Q5JQC9 854 aa11.24□□□□□ -0.61
LDHA-218ENST00000540430 OGFRQ9NZT2 677 aa11.24□□□□□ -0.61
LDHA-218ENST00000540430 CICQ96RK0 1608 aaPredicted RBP11.24□□□□□ -0.61
LDHA-218ENST00000540430 REC8O95072 547 aa11.24□□□□□ -0.61
LDHA-218ENST00000540430 RFC4P35249 363 aa11.24□□□□□ -0.61
LDHA-218ENST00000540430 SIRT2Q8IXJ6 389 aa11.24□□□□□ -0.61
LDHA-218ENST00000540430 ATP10DQ9P241 1426 aa11.24□□□□□ -0.61
LDHA-218ENST00000540430 COL3A1P02461 1466 aaPredicted RBP11.23□□□□□ -0.61
LDHA-218ENST00000540430 ADCY9O60503 1353 aa11.23□□□□□ -0.61
LDHA-218ENST00000540430 GYS1P13807 737 aa11.23□□□□□ -0.61
LDHA-218ENST00000540430 TSC1Q92574 1164 aa11.23□□□□□ -0.61
LDHA-218ENST00000540430 INTS4Q96HW7 963 aaKnown RBP11.23□□□□□ -0.61
LDHA-218ENST00000540430 CHRM1P11229 460 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms