RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 MTX1Q13505 466 aa12.18□□□□□ -0.46
GPD2-213ENST00000540309 IQCB1Q15051 598 aa12.18□□□□□ -0.46
GPD2-213ENST00000540309 TSHZ3Q63HK5 1081 aa12.18□□□□□ -0.46
GPD2-213ENST00000540309 NUDT16Q96DE0 195 aaKnown RBP12.18□□□□□ -0.46
GPD2-213ENST00000540309 OSBPL5Q9H0X9 879 aaPredicted RBP12.18□□□□□ -0.46
GPD2-213ENST00000540309 LRRFIP2Q9Y608 721 aaKnown RBP12.18□□□□□ -0.46
GPD2-213ENST00000540309 TPM1P09493 284 aa12.18□□□□□ -0.46
GPD2-213ENST00000540309 LIG1P18858 919 aa12.18□□□□□ -0.46
GPD2-213ENST00000540309 CDK11BP21127 795 aaKnown RBP12.18□□□□□ -0.46
GPD2-213ENST00000540309 CYP2C19P33261 490 aa12.18□□□□□ -0.46
GPD2-213ENST00000540309 LRMPQ12912 555 aa12.18□□□□□ -0.46
GPD2-213ENST00000540309 LEO1Q8WVC0 666 aaPredicted RBP12.18□□□□□ -0.46
GPD2-213ENST00000540309 GPATCH3Q96I76 525 aa12.18□□□□□ -0.46
GPD2-213ENST00000540309 SRRTQ9BXP5 876 aaKnown RBP12.18□□□□□ -0.46
GPD2-213ENST00000540309 HMG20BQ9P0W2 317 aa12.18□□□□□ -0.46
GPD2-213ENST00000540309 MYH15Q9Y2K3 1946 aa12.17□□□□□ -0.46
GPD2-213ENST00000540309 PEAK1Q9H792 1746 aa12.17□□□□□ -0.46
GPD2-213ENST00000540309 CEP170BQ9Y4F5 1589 aaPredicted RBP12.17□□□□□ -0.46
GPD2-213ENST00000540309 HOXB7P09629 217 aa12.17□□□□□ -0.46
GPD2-213ENST00000540309 RRS1Q15050 365 aaKnown RBP12.17□□□□□ -0.46
GPD2-213ENST00000540309 STX1AQ16623 288 aa12.17□□□□□ -0.46
GPD2-213ENST00000540309 ME3Q16798 604 aa12.17□□□□□ -0.46
GPD2-213ENST00000540309 ERC1Q8IUD2 1116 aa12.17□□□□□ -0.46
GPD2-213ENST00000540309 CCAR2Q8N163 923 aaKnown RBP12.17□□□□□ -0.46
GPD2-213ENST00000540309 IPO4Q8TEX9 1081 aaKnown RBP12.17□□□□□ -0.46
GPD2-213ENST00000540309 MAP4K1Q92918 833 aa12.17□□□□□ -0.46
GPD2-213ENST00000540309 EVI5LQ96CN4 794 aa12.17□□□□□ -0.46
GPD2-213ENST00000540309 ZNF215Q9UL58 517 aaPredicted RBP12.17□□□□□ -0.46
GPD2-213ENST00000540309 JCADQ9P266 1359 aa12.16□□□□□ -0.46
GPD2-213ENST00000540309 VPS37CA5D8V6 355 aaPredicted RBP12.16□□□□□ -0.46
GPD2-213ENST00000540309 NRDCO43847 1150 aa12.16□□□□□ -0.46
GPD2-213ENST00000540309 PLPPR3Q6T4P5 718 aa12.16□□□□□ -0.46
GPD2-213ENST00000540309 WAPLQ7Z5K2 1190 aa12.16□□□□□ -0.46
GPD2-213ENST00000540309 JAKMIP1Q96N16 626 aaKnown RBP12.16□□□□□ -0.46
GPD2-213ENST00000540309 V9GYY5 206 aaPredicted RBP12.16□□□□□ -0.46
GPD2-213ENST00000540309 NRXN3Q9Y4C0 1643 aa12.16□□□□□ -0.46
GPD2-213ENST00000540309 SURF6O75683 361 aaKnown RBP12.16□□□□□ -0.46
GPD2-213ENST00000540309 LARGE1O95461 756 aa12.16□□□□□ -0.46
GPD2-213ENST00000540309 SKILP12757 684 aa12.16□□□□□ -0.46
GPD2-213ENST00000540309 ST3GAL1Q11201 340 aa12.16□□□□□ -0.46
GPD2-213ENST00000540309 MUM1L1Q5H9M0 696 aa12.16□□□□□ -0.46
GPD2-213ENST00000540309 TEX35Q5T0J7 233 aa12.16□□□□□ -0.46
GPD2-213ENST00000540309 CHMP4CQ96CF2 233 aa12.16□□□□□ -0.46
GPD2-213ENST00000540309 NAT10Q9H0A0 1025 aaKnown RBP12.16□□□□□ -0.46
GPD2-213ENST00000540309 NRBP1Q9UHY1 535 aa12.16□□□□□ -0.46
GPD2-213ENST00000540309 ZBTB7CA1YPR0 619 aa12.15□□□□□ -0.46
GPD2-213ENST00000540309 IRX5P78411 483 aaPredicted RBP12.15□□□□□ -0.46
GPD2-213ENST00000540309 CCZ1BP86790 482 aa12.15□□□□□ -0.46
GPD2-213ENST00000540309 CCZ1P86791 482 aaPredicted RBP12.15□□□□□ -0.46
GPD2-213ENST00000540309 CCDC93Q567U6 631 aa12.15□□□□□ -0.46
GPD2-213ENST00000540309 FBXO38Q6PIJ6 1188 aa12.15□□□□□ -0.46
GPD2-213ENST00000540309 PPP1R42Q7Z4L9 355 aa12.15□□□□□ -0.46
GPD2-213ENST00000540309 FILIP1Q7Z7B0 1213 aa12.15□□□□□ -0.46
GPD2-213ENST00000540309 CCDC150Q8NCX0 1101 aa12.15□□□□□ -0.46
GPD2-213ENST00000540309 BPIFA3Q9BQP9 254 aa12.15□□□□□ -0.46
GPD2-213ENST00000540309 ANO10Q9NW15 660 aa12.15□□□□□ -0.46
GPD2-213ENST00000540309 ARGLU1Q9NWB6 273 aaPredicted RBP12.15□□□□□ -0.46
GPD2-213ENST00000540309 PLEKHG3A1L390 1219 aa12.14□□□□□ -0.47
GPD2-213ENST00000540309 TPM4P67936 248 aa12.14□□□□□ -0.47
GPD2-213ENST00000540309 KRT32Q14532 448 aa12.14□□□□□ -0.47
GPD2-213ENST00000540309 CWC27Q6UX04 472 aaKnown RBP12.14□□□□□ -0.47
GPD2-213ENST00000540309 TICAM2Q86XR7 235 aa12.14□□□□□ -0.47
GPD2-213ENST00000540309 NOL10Q9BSC4 688 aaKnown RBP12.14□□□□□ -0.47
GPD2-213ENST00000540309 ECHDC1Q9NTX5 307 aa12.14□□□□□ -0.47
GPD2-213ENST00000540309 KCNJ4P48050 445 aa12.14□□□□□ -0.47
GPD2-213ENST00000540309 CCDC144BQ3MJ40 725 aa12.14□□□□□ -0.47
GPD2-213ENST00000540309 CDC37L1Q7L3B6 337 aa12.14□□□□□ -0.47
GPD2-213ENST00000540309 CCDC144CPQ8IYA2 1237 aa12.14□□□□□ -0.47
GPD2-213ENST00000540309 LLPHQ9BRT6 129 aaKnown RBP12.14□□□□□ -0.47
GPD2-213ENST00000540309 TPCN1Q9ULQ1 816 aa12.14□□□□□ -0.47
GPD2-213ENST00000540309 PTPRUQ92729 1446 aa12.14□□□□□ -0.47
GPD2-213ENST00000540309 SBNO1A3KN83 1393 aa12.13□□□□□ -0.47
GPD2-213ENST00000540309 IGSF1Q8N6C5 1336 aa12.13□□□□□ -0.47
GPD2-213ENST00000540309 NPM1P06748 294 aaKnown RBP eCLIP12.13□□□□□ -0.47
GPD2-213ENST00000540309 CREB3L3Q68CJ9 461 aa12.13□□□□□ -0.47
GPD2-213ENST00000540309 NUTM1Q86Y26 1132 aa12.13□□□□□ -0.47
GPD2-213ENST00000540309 CLASRPQ8N2M8 674 aaKnown RBP12.13□□□□□ -0.47
GPD2-213ENST00000540309 TXLNBQ8N3L3 684 aa12.13□□□□□ -0.47
GPD2-213ENST00000540309 RCOR1Q9UKL0 485 aa12.13□□□□□ -0.47
GPD2-213ENST00000540309 FLT4P35916 1363 aa12.13□□□□□ -0.47
GPD2-213ENST00000540309 AGLP35573 1532 aa12.13□□□□□ -0.47
GPD2-213ENST00000540309 CCDC69A6NI79 296 aa12.12□□□□□ -0.47
GPD2-213ENST00000540309 PDE4CQ08493 712 aa12.12□□□□□ -0.47
GPD2-213ENST00000540309 CAMK4Q16566 473 aa12.12□□□□□ -0.47
GPD2-213ENST00000540309 MTHFSDQ2M296 383 aaKnown RBP12.12□□□□□ -0.47
GPD2-213ENST00000540309 PRPF40BQ6NWY9 871 aaKnown RBP12.12□□□□□ -0.47
GPD2-213ENST00000540309 BLOC1S2Q6QNY1 142 aa12.12□□□□□ -0.47
GPD2-213ENST00000540309 CKAP2LQ8IYA6 745 aa12.12□□□□□ -0.47
GPD2-213ENST00000540309 RGS22Q8NE09 1264 aa12.12□□□□□ -0.47
GPD2-213ENST00000540309 DNAJC25Q9H1X3 360 aa12.12□□□□□ -0.47
GPD2-213ENST00000540309 IL1RAPL2Q9NP60 686 aa12.12□□□□□ -0.47
GPD2-213ENST00000540309 RFX7Q2KHR2 1363 aa12.12□□□□□ -0.47
GPD2-213ENST00000540309 PHLPP2Q6ZVD8 1323 aa12.12□□□□□ -0.47
GPD2-213ENST00000540309 NR1I2O75469 434 aa12.12□□□□□ -0.47
GPD2-213ENST00000540309 RPS6KB1P23443 525 aa12.12□□□□□ -0.47
GPD2-213ENST00000540309 ADCK5Q3MIX3 580 aa12.12□□□□□ -0.47
GPD2-213ENST00000540309 PGBD1Q96JS3 809 aa12.12□□□□□ -0.47
GPD2-213ENST00000540309 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
GPD2-213ENST00000540309 USP6P35125 1406 aa12.11□□□□□ -0.47
GPD2-213ENST00000540309 BECN2A8MW95 431 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms