RNA–Protein interactions for RNA: ENST00000540209.5

RAP1B-221, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-221ENST00000540209 PPP1R42Q7Z4L9 355 aa25.18■■□□□ 1.62
RAP1B-221ENST00000540209 KDM2BQ8NHM5 1336 aa25.17■■□□□ 1.62
RAP1B-221ENST00000540209 LAMB2P55268 1798 aa25.17■■□□□ 1.62
RAP1B-221ENST00000540209 HSP90AB3PQ58FF7 597 aa25.16■■□□□ 1.62
RAP1B-221ENST00000540209 TAOK3Q9H2K8 898 aa25.16■■□□□ 1.62
RAP1B-221ENST00000540209 ALDH1B1P30837 517 aa25.15■■□□□ 1.62
RAP1B-221ENST00000540209 RNF123Q5XPI4 1314 aa25.14■■□□□ 1.62
RAP1B-221ENST00000540209 TCIRG1Q13488 830 aa25.14■■□□□ 1.62
RAP1B-221ENST00000540209 CCDC93Q567U6 631 aa25.14■■□□□ 1.62
RAP1B-221ENST00000540209 UTP14AQ9BVJ6 771 aaKnown RBP25.14■■□□□ 1.62
RAP1B-221ENST00000540209 HYPKQ9NX55 129 aa25.14■■□□□ 1.62
RAP1B-221ENST00000540209 NCBP3Q53F19 620 aaKnown RBP25.13■■□□□ 1.61
RAP1B-221ENST00000540209 NLRP10Q86W26 655 aa25.13■■□□□ 1.61
RAP1B-221ENST00000540209 WWC1Q8IX03 1113 aa25.13■■□□□ 1.61
RAP1B-221ENST00000540209 PLBD2Q8NHP8 589 aa25.13■■□□□ 1.61
RAP1B-221ENST00000540209 SNED1Q8TER0 1413 aa25.12■■□□□ 1.61
RAP1B-221ENST00000540209 HOXA10P31260 410 aaPredicted RBP25.12■■□□□ 1.61
RAP1B-221ENST00000540209 C8orf58Q8NAV2 365 aa25.12■■□□□ 1.61
RAP1B-221ENST00000540209 GLTPD2A6NH11 291 aa25.11■■□□□ 1.61
RAP1B-221ENST00000540209 ELL2O00472 640 aaPredicted RBP25.11■■□□□ 1.61
RAP1B-221ENST00000540209 TOMM70O94826 608 aa25.11■■□□□ 1.61
RAP1B-221ENST00000540209 SLC10A5Q5PT55 438 aa25.11■■□□□ 1.61
RAP1B-221ENST00000540209 OLFM4Q6UX06 510 aa25.11■■□□□ 1.61
RAP1B-221ENST00000540209 ANKRD13DQ6ZTN6 518 aa25.11■■□□□ 1.61
RAP1B-221ENST00000540209 C3orf67Q6ZVT6 689 aa25.11■■□□□ 1.61
RAP1B-221ENST00000540209 RPGRQ92834 1020 aaKnown RBP25.11■■□□□ 1.61
RAP1B-221ENST00000540209 DDX60Q8IY21 1712 aaKnown RBP25.11■■□□□ 1.61
RAP1B-221ENST00000540209 WDR90Q96KV7 1748 aa25.09■■□□□ 1.61
RAP1B-221ENST00000540209 TSR2Q969E8 191 aaKnown RBP25.09■■□□□ 1.61
RAP1B-221ENST00000540209 FKBP4Q02790 459 aaKnown RBP eCLIP25.08■■□□□ 1.61
RAP1B-221ENST00000540209 RTKN2Q8IZC4 609 aa25.08■■□□□ 1.61
RAP1B-221ENST00000540209 NLRP3Q96P20 1036 aa25.08■■□□□ 1.61
RAP1B-221ENST00000540209 RRAGCQ9HB90 399 aa25.08■■□□□ 1.61
RAP1B-221ENST00000540209 IL16Q14005 1332 aa25.08■■□□□ 1.6
RAP1B-221ENST00000540209 TSPYL6Q8N831 410 aa25.07■■□□□ 1.6
RAP1B-221ENST00000540209 RBM17Q96I25 401 aaKnown RBP25.07■■□□□ 1.6
RAP1B-221ENST00000540209 CRAMP1Q96RY5 1269 aa25.07■■□□□ 1.6
RAP1B-221ENST00000540209 ISCA1Q9BUE6 129 aa25.07■■□□□ 1.6
RAP1B-221ENST00000540209 PHAXQ9H814 394 aaKnown RBP25.06■■□□□ 1.6
RAP1B-221ENST00000540209 TRMT112Q9UI30 125 aaKnown RBP25.06■■□□□ 1.6
RAP1B-221ENST00000540209 SH3TC1Q8TE82 1336 aa25.06■■□□□ 1.6
RAP1B-221ENST00000540209 SYNE4Q8N205 404 aa25.05■■□□□ 1.6
RAP1B-221ENST00000540209 RBM46Q8TBY0 533 aaKnown RBP25.04■■□□□ 1.6
RAP1B-221ENST00000540209 CHMP4AQ9BY43 222 aa25.04■■□□□ 1.6
RAP1B-221ENST00000540209 HCLS1P14317 486 aaPredicted RBP25.03■■□□□ 1.6
RAP1B-221ENST00000540209 CCDC30Q5VVM6 783 aa25.03■■□□□ 1.6
RAP1B-221ENST00000540209 CC2D2BQ6DHV5 1058 aa25.03■■□□□ 1.6
RAP1B-221ENST00000540209 DPY19L2Q6NUT2 758 aa25.03■■□□□ 1.6
RAP1B-221ENST00000540209 C16orf71Q8IYS4 520 aaPredicted RBP25.03■■□□□ 1.6
RAP1B-221ENST00000540209 PSMD1Q99460 953 aa25.03■■□□□ 1.6
RAP1B-221ENST00000540209 TAF1P21675 1872 aa25.02■■□□□ 1.6
RAP1B-221ENST00000540209 ATP5J2-PTCD1G3V325 749 aa25.02■■□□□ 1.6
RAP1B-221ENST00000540209 PPEF1O14829 653 aaPredicted RBP25.02■■□□□ 1.6
RAP1B-221ENST00000540209 APLP1P51693 650 aa25.02■■□□□ 1.6
RAP1B-221ENST00000540209 GOLGA2Q08379 1002 aa25.02■■□□□ 1.6
RAP1B-221ENST00000540209 TRIM28Q13263 835 aaKnown RBP25.02■■□□□ 1.6
RAP1B-221ENST00000540209 ZNF277Q9NRM2 450 aaPredicted RBP25.02■■□□□ 1.6
RAP1B-221ENST00000540209 VEGFAP15692 232 aaPredicted RBP25.01■■□□□ 1.59
RAP1B-221ENST00000540209 RIC3Q7Z5B4 369 aa25.01■■□□□ 1.59
RAP1B-221ENST00000540209 DNAJC5GQ8N7S2 189 aa25.01■■□□□ 1.59
RAP1B-221ENST00000540209 ABCC4O15439 1325 aa25.01■■□□□ 1.59
RAP1B-221ENST00000540209 POTECB2RU33 542 aa25■■□□□ 1.59
RAP1B-221ENST00000540209 GRIPAP1Q4V328 841 aa25■■□□□ 1.59
RAP1B-221ENST00000540209 SLC51AQ86UW1 340 aa25■■□□□ 1.59
RAP1B-221ENST00000540209 WDR63Q8IWG1 891 aa25■■□□□ 1.59
RAP1B-221ENST00000540209 ZNF428Q96B54 188 aa25■■□□□ 1.59
RAP1B-221ENST00000540209 CACNA1FO60840 1977 aa24.99■■□□□ 1.59
RAP1B-221ENST00000540209 IARSP41252 1262 aaKnown RBP24.99■■□□□ 1.59
RAP1B-221ENST00000540209 TWISTNBQ3B726 338 aaPredicted RBP24.99■■□□□ 1.59
RAP1B-221ENST00000540209 FAM9BQ8IZU0 186 aa24.99■■□□□ 1.59
RAP1B-221ENST00000540209 FANCIQ9NVI1 1328 aa24.99■■□□□ 1.59
RAP1B-221ENST00000540209 LRRC37AA6NMS7 1700 aa24.98■■□□□ 1.59
RAP1B-221ENST00000540209 COL4A5P29400 1685 aa24.98■■□□□ 1.59
RAP1B-221ENST00000540209 FAM89AQ96GI7 184 aa24.98■■□□□ 1.59
RAP1B-221ENST00000540209 SALL2Q9Y467 1007 aaPredicted RBP24.98■■□□□ 1.59
RAP1B-221ENST00000540209 SCN4AP35499 1836 aa24.98■■□□□ 1.59
RAP1B-221ENST00000540209 FSTL1Q12841 308 aa24.97■■□□□ 1.59
RAP1B-221ENST00000540209 ATP6V0A2Q9Y487 856 aa24.97■■□□□ 1.59
RAP1B-221ENST00000540209 TCERG1O14776 1098 aaKnown RBP24.96■■□□□ 1.59
RAP1B-221ENST00000540209 DDNO94850 711 aaPredicted RBP24.96■■□□□ 1.59
RAP1B-221ENST00000540209 DDX58O95786 925 aaKnown RBP24.95■■□□□ 1.58
RAP1B-221ENST00000540209 MYD88Q99836 296 aa24.95■■□□□ 1.58
RAP1B-221ENST00000540209 STK31Q9BXU1 1019 aa24.95■■□□□ 1.58
RAP1B-221ENST00000540209 ZNF541Q9H0D2 1346 aa24.94■■□□□ 1.58
RAP1B-221ENST00000540209 FZD9O00144 591 aa24.94■■□□□ 1.58
RAP1B-221ENST00000540209 BBOX1O75936 387 aa24.94■■□□□ 1.58
RAP1B-221ENST00000540209 DDX46Q7L014 1031 aaKnown RBP24.94■■□□□ 1.58
RAP1B-221ENST00000540209 METTL22Q9BUU2 404 aaPredicted RBP24.94■■□□□ 1.58
RAP1B-221ENST00000540209 COL4A1P02462 1669 aa24.94■■□□□ 1.58
RAP1B-221ENST00000540209 GRAPQ13588 217 aa24.93■■□□□ 1.58
RAP1B-221ENST00000540209 SF3B3Q15393 1217 aaKnown RBP24.93■■□□□ 1.58
RAP1B-221ENST00000540209 ZBTB38Q8NAP3 1195 aaPredicted RBP24.93■■□□□ 1.58
RAP1B-221ENST00000540209 CCDC191Q8NCU4 936 aa24.93■■□□□ 1.58
RAP1B-221ENST00000540209 SMC1BQ8NDV3 1235 aa24.93■■□□□ 1.58
RAP1B-221ENST00000540209 GRAPLQ8TC17 118 aaPredicted RBP24.93■■□□□ 1.58
RAP1B-221ENST00000540209 L3MBTL3Q96JM7 780 aaPredicted RBP24.93■■□□□ 1.58
RAP1B-221ENST00000540209 IRS4O14654 1257 aaPredicted RBP24.92■■□□□ 1.58
RAP1B-221ENST00000540209 RTL5Q5HYW3 569 aaPredicted RBP24.92■■□□□ 1.58
RAP1B-221ENST00000540209 MAP3K2Q9Y2U5 619 aa24.92■■□□□ 1.58
RAP1B-221ENST00000540209 KSR2Q6VAB6 950 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms