RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 TFIP11Q9UBB9 837 aaKnown RBP16.37■□□□□ 0.21
BNIP3-202ENST00000540159 AOX1Q06278 1338 aa16.37■□□□□ 0.21
BNIP3-202ENST00000540159 F13A1P00488 732 aa16.37■□□□□ 0.21
BNIP3-202ENST00000540159 ST3GAL1Q11201 340 aa16.37■□□□□ 0.21
BNIP3-202ENST00000540159 CREB3L3Q68CJ9 461 aa16.37■□□□□ 0.21
BNIP3-202ENST00000540159 RUFY2Q8WXA3 655 aa16.37■□□□□ 0.21
BNIP3-202ENST00000540159 ZKSCAN1P17029 563 aaPredicted RBP16.37■□□□□ 0.21
BNIP3-202ENST00000540159 LINS1Q8NG48 757 aa16.37■□□□□ 0.21
BNIP3-202ENST00000540159 NAP1L2Q9ULW6 460 aaPredicted RBP16.37■□□□□ 0.21
BNIP3-202ENST00000540159 CCDC171Q6TFL3 1326 aa16.36■□□□□ 0.21
BNIP3-202ENST00000540159 HSP90AA2PQ14568 343 aaPredicted RBP16.36■□□□□ 0.21
BNIP3-202ENST00000540159 PDIA6Q15084 440 aa16.36■□□□□ 0.21
BNIP3-202ENST00000540159 CCDC85AQ96PX6 553 aaPredicted RBP16.36■□□□□ 0.21
BNIP3-202ENST00000540159 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.36■□□□□ 0.21
BNIP3-202ENST00000540159 DDX46Q7L014 1031 aaKnown RBP16.36■□□□□ 0.21
BNIP3-202ENST00000540159 DDX11Q96FC9 970 aa16.36■□□□□ 0.21
BNIP3-202ENST00000540159 DDX58O95786 925 aaKnown RBP16.35■□□□□ 0.21
BNIP3-202ENST00000540159 NEXNQ0ZGT2 675 aa16.35■□□□□ 0.21
BNIP3-202ENST00000540159 TTC41PQ6P2S7 1318 aa16.35■□□□□ 0.21
BNIP3-202ENST00000540159 CEBPZQ03701 1054 aaKnown RBP16.35■□□□□ 0.21
BNIP3-202ENST00000540159 CDC37L1Q7L3B6 337 aa16.35■□□□□ 0.21
BNIP3-202ENST00000540159 SYAP1Q96A49 352 aaPredicted RBP16.35■□□□□ 0.21
BNIP3-202ENST00000540159 EVI5LQ96CN4 794 aa16.35■□□□□ 0.21
BNIP3-202ENST00000540159 TTC12Q9H892 705 aaPredicted RBP16.35■□□□□ 0.21
BNIP3-202ENST00000540159 DDX21Q9NR30 783 aaKnown RBP eCLIP16.35■□□□□ 0.21
BNIP3-202ENST00000540159 DNTTIP2Q5QJE6 756 aaKnown RBP16.34■□□□□ 0.21
BNIP3-202ENST00000540159 LARP1BQ659C4 914 aaKnown RBP16.34■□□□□ 0.21
BNIP3-202ENST00000540159 PXDNLA1KZ92 1463 aa16.34■□□□□ 0.21
BNIP3-202ENST00000540159 HOXB7P09629 217 aa16.34■□□□□ 0.21
BNIP3-202ENST00000540159 TFCP2Q12800 502 aa16.34■□□□□ 0.21
BNIP3-202ENST00000540159 PDLIM2Q96JY6 352 aa16.34■□□□□ 0.21
BNIP3-202ENST00000540159 TUBGCP6Q96RT7 1819 aa16.34■□□□□ 0.21
BNIP3-202ENST00000540159 SLC27A2O14975 620 aa16.34■□□□□ 0.21
BNIP3-202ENST00000540159 ALDH1L1O75891 902 aa16.34■□□□□ 0.21
BNIP3-202ENST00000540159 NEUROD6Q96NK8 337 aa16.34■□□□□ 0.21
BNIP3-202ENST00000540159 FAM13BQ9NYF5 915 aa16.34■□□□□ 0.21
BNIP3-202ENST00000540159 NEURL1BA8MQ27 555 aa16.33■□□□□ 0.21
BNIP3-202ENST00000540159 TTC5Q8N0Z6 440 aa16.33■□□□□ 0.21
BNIP3-202ENST00000540159 SPC24Q8NBT2 197 aa16.33■□□□□ 0.21
BNIP3-202ENST00000540159 MTMR6Q9Y217 621 aa16.33■□□□□ 0.21
BNIP3-202ENST00000540159 NFAT5O94916 1531 aa16.33■□□□□ 0.2
BNIP3-202ENST00000540159 CACNA1FO60840 1977 aa16.33■□□□□ 0.2
BNIP3-202ENST00000540159 NECTIN1Q15223 517 aa16.33■□□□□ 0.2
BNIP3-202ENST00000540159 NOL7Q9UMY1 257 aaKnown RBP16.33■□□□□ 0.2
BNIP3-202ENST00000540159 ERBB3P21860 1342 aa16.33■□□□□ 0.2
BNIP3-202ENST00000540159 CKAP2LQ8IYA6 745 aa16.32■□□□□ 0.2
BNIP3-202ENST00000540159 GCKRQ14397 625 aa16.32■□□□□ 0.2
BNIP3-202ENST00000540159 ANKRD13DQ6ZTN6 518 aa16.32■□□□□ 0.2
BNIP3-202ENST00000540159 DBNDD2Q9BQY9 259 aa16.32■□□□□ 0.2
BNIP3-202ENST00000540159 ZKSCAN5Q9Y2L8 839 aa16.32■□□□□ 0.2
BNIP3-202ENST00000540159 A0A087WZG4 1122 aa16.32■□□□□ 0.2
BNIP3-202ENST00000540159 JAK2O60674 1132 aa16.32■□□□□ 0.2
BNIP3-202ENST00000540159 HSP90B1P14625 803 aaKnown RBP16.32■□□□□ 0.2
BNIP3-202ENST00000540159 BLOC1S2Q6QNY1 142 aa16.32■□□□□ 0.2
BNIP3-202ENST00000540159 ERC1Q8IUD2 1116 aa16.32■□□□□ 0.2
BNIP3-202ENST00000540159 DBNLQ9UJU6 430 aaKnown RBP16.32■□□□□ 0.2
BNIP3-202ENST00000540159 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.32■□□□□ 0.26e-6■■□□□ 14.4
BNIP3-202ENST00000540159 FAM177BA6PVY3 158 aa16.31■□□□□ 0.2
BNIP3-202ENST00000540159 MTX1Q13505 466 aa16.31■□□□□ 0.2
BNIP3-202ENST00000540159 TSC1Q92574 1164 aa16.31■□□□□ 0.2
BNIP3-202ENST00000540159 ADCY5O95622 1261 aa16.31■□□□□ 0.2
BNIP3-202ENST00000540159 FGD1P98174 961 aa16.31■□□□□ 0.2
BNIP3-202ENST00000540159 CHST3Q7LGC8 479 aa16.31■□□□□ 0.2
BNIP3-202ENST00000540159 SLC52A2Q9HAB3 445 aa16.31■□□□□ 0.2
BNIP3-202ENST00000540159 ZSWIM6Q9HCJ5 1215 aa16.31■□□□□ 0.2
BNIP3-202ENST00000540159 A0A0G2JLW4 131 aa16.3■□□□□ 0.2
BNIP3-202ENST00000540159 TATP17735 454 aaPredicted RBP16.3■□□□□ 0.2
BNIP3-202ENST00000540159 LARP1Q6PKG0 1096 aaKnown RBP16.3■□□□□ 0.2
BNIP3-202ENST00000540159 BCL11BQ9C0K0 894 aaPredicted RBP16.3■□□□□ 0.2
BNIP3-202ENST00000540159 NPHP3Q7Z494 1330 aa16.3■□□□□ 0.2
BNIP3-202ENST00000540159 CCDC183Q5T5S1 534 aa16.3■□□□□ 0.2
BNIP3-202ENST00000540159 OFD1O75665 1012 aa16.3■□□□□ 0.2
BNIP3-202ENST00000540159 TIMM10P62072 90 aa16.3■□□□□ 0.2
BNIP3-202ENST00000540159 VPS53Q5VIR6 699 aa16.3■□□□□ 0.2
BNIP3-202ENST00000540159 ZNF594Q96JF6 807 aaPredicted RBP16.3■□□□□ 0.2
BNIP3-202ENST00000540159 UBE2HP62256 183 aa16.29■□□□□ 0.2
BNIP3-202ENST00000540159 ZBTB3Q9H5J0 574 aa16.29■□□□□ 0.2
BNIP3-202ENST00000540159 CYP27B1O15528 508 aa16.29■□□□□ 0.2
BNIP3-202ENST00000540159 PHKG2P15735 406 aa16.29■□□□□ 0.2
BNIP3-202ENST00000540159 LMBR1LQ6UX01 489 aa16.29■□□□□ 0.2
BNIP3-202ENST00000540159 TTC6Q86TZ1 520 aa16.29■□□□□ 0.2
BNIP3-202ENST00000540159 MAP4K1Q92918 833 aa16.29■□□□□ 0.2
BNIP3-202ENST00000540159 ADGRL3Q9HAR2 1447 aa16.29■□□□□ 0.2
BNIP3-202ENST00000540159 PHF14O94880 888 aa16.28■□□□□ 0.2
BNIP3-202ENST00000540159 LIG1P18858 919 aa16.28■□□□□ 0.2
BNIP3-202ENST00000540159 HSP90AB3PQ58FF7 597 aa16.28■□□□□ 0.2
BNIP3-202ENST00000540159 FBXW7Q969H0 707 aa16.28■□□□□ 0.2
BNIP3-202ENST00000540159 CCDC39Q9UFE4 941 aa16.28■□□□□ 0.2
BNIP3-202ENST00000540159 KAT6BQ8WYB5 2073 aa16.28■□□□□ 0.2
BNIP3-202ENST00000540159 A0A087WWV3 80 aa16.27■□□□□ 0.2
BNIP3-202ENST00000540159 UQCRHLA0A096LP55 91 aa16.27■□□□□ 0.2
BNIP3-202ENST00000540159 UQCRHP07919 91 aa16.27■□□□□ 0.2
BNIP3-202ENST00000540159 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.27■□□□□ 0.2
BNIP3-202ENST00000540159 AP5Z1O43299 807 aa16.27■□□□□ 0.19
BNIP3-202ENST00000540159 CABP4P57796 275 aa16.27■□□□□ 0.19
BNIP3-202ENST00000540159 GUCY1B3Q02153 619 aa16.27■□□□□ 0.19
BNIP3-202ENST00000540159 PTPN12Q05209 780 aaKnown RBP16.27■□□□□ 0.19
BNIP3-202ENST00000540159 RAB11FIP4Q86YS3 637 aa16.27■□□□□ 0.19
BNIP3-202ENST00000540159 METTL22Q9BUU2 404 aaPredicted RBP16.27■□□□□ 0.19
BNIP3-202ENST00000540159 USP42Q9H9J4 1324 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms