RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 UTP14AQ9BVJ6 771 aaKnown RBP16.57■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 TCERG1O14776 1098 aaKnown RBP16.56■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 VEGFAP15692 232 aaPredicted RBP16.56■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 FKBP4Q02790 459 aaKnown RBP eCLIP16.56■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 CALD1Q05682 793 aaKnown RBP16.56■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 C3orf67Q6ZVT6 689 aa16.56■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 ZNF277Q9NRM2 450 aaPredicted RBP16.56■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 RIC1Q4ADV7 1423 aa16.55■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 DICER1Q9UPY3 1922 aaKnown RBP16.55■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 ELL2O00472 640 aaPredicted RBP16.55■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 HOXB7P09629 217 aa16.55■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 GNAI1P63096 354 aa16.55■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 HSP90AB3PQ58FF7 597 aa16.55■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 RTKN2Q8IZC4 609 aa16.55■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 RBM17Q96I25 401 aaKnown RBP16.55■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 IFT57Q9NWB7 429 aa16.55■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 DBF4Q9UBU7 674 aaPredicted RBP16.55■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 ANKRD36CQ5JPF3 1778 aa16.54■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 ANP32CO43423 234 aa16.54■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 DDNO94850 711 aaPredicted RBP16.54■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 ZNF853P0CG23 659 aa16.54■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 APLP1P51693 650 aa16.54■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 TCIRG1Q13488 830 aa16.54■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 SLC51AQ86UW1 340 aa16.54■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 NLRP10Q86W26 655 aa16.54■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 NLRP3Q96P20 1036 aa16.54■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 TRMT112Q9UI30 125 aaKnown RBP16.54■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 PPEF1O14829 653 aaPredicted RBP16.53■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 HCLS1P14317 486 aaPredicted RBP16.53■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 HOXA10P31260 410 aaPredicted RBP16.53■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 FSTL1Q12841 308 aa16.53■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 SYNE4Q8N205 404 aa16.53■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 SMC1BQ8NDV3 1235 aa16.53■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 MRS2Q9HD23 443 aa16.53■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 POTECB2RU33 542 aa16.52■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 ANKRD13DQ6ZTN6 518 aa16.52■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 PLBD2Q8NHP8 589 aa16.52■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 CRAMP1Q96RY5 1269 aa16.52■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 HYPKQ9NX55 129 aa16.52■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 WDR90Q96KV7 1748 aa16.52■□□□□ 0.24
TSPAN9-IT1-201ENST00000539784 ATP5J2-PTCD1G3V325 749 aa16.51■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 IARSP41252 1262 aaKnown RBP16.51■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 HTRA3P83110 453 aa16.51■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 RNF123Q5XPI4 1314 aa16.5■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 SH3TC1Q8TE82 1336 aa16.5■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 ZNF541Q9H0D2 1346 aa16.5■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 SLC10A5Q5PT55 438 aa16.5■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 C8orf58Q8NAV2 365 aa16.5■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 RTL5Q5HYW3 569 aaPredicted RBP16.49■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 CC2D2BQ6DHV5 1058 aa16.49■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 RIC3Q7Z5B4 369 aa16.49■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 TSR2Q969E8 191 aaKnown RBP16.49■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 PSMD1Q99460 953 aa16.49■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 TMX4Q9H1E5 349 aaPredicted RBP16.49■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 PHAXQ9H814 394 aaKnown RBP16.49■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 ABCC4O15439 1325 aa16.48■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 SNED1Q8TER0 1413 aa16.48■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 GOLGA2Q08379 1002 aa16.48■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 JDP2Q8WYK2 163 aa16.48■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 SALL2Q9Y467 1007 aaPredicted RBP16.48■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 LAMB2P55268 1798 aa16.48■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 CEP350Q5VT06 3117 aa16.47■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 DDX46Q7L014 1031 aaKnown RBP16.47■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 TSPYL6Q8N831 410 aa16.47■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 FAM89AQ96GI7 184 aa16.47■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 ISCA1Q9BUE6 129 aa16.47■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 POTEIP0CG38 1075 aa16.46■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 POTEJP0CG39 1038 aa16.46■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 WWC1Q8IX03 1113 aa16.46■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 LARGE2Q8N3Y3 721 aa16.46■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 ATP6V0A2Q9Y487 856 aa16.46■□□□□ 0.23
TSPAN9-IT1-201ENST00000539784 IQCA1LA6NCM1 817 aa16.45■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 FZD9O00144 591 aa16.45■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 GRIPAP1Q4V328 841 aa16.45■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 CCDC30Q5VVM6 783 aa16.45■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 MYD88Q99836 296 aa16.45■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 GJA3Q9Y6H8 435 aa16.45■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 COL4A5P29400 1685 aa16.44■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 EIF6P56537 245 aaKnown RBP16.44■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 CCDC27Q2M243 656 aa16.44■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 EAPPQ56P03 285 aaPredicted RBP16.44■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 DNAJC5GQ8N7S2 189 aa16.44■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 L3MBTL3Q96JM7 780 aaPredicted RBP16.44■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 DDX60Q8IY21 1712 aaKnown RBP16.43■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 PPIP5K2O43314 1243 aa16.43■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 BBOX1O75936 387 aa16.43■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 GRAPQ13588 217 aa16.43■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 AOC3Q16853 763 aa16.43■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 CHADLQ6NUI6 762 aa16.43■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 NIM1KQ8IY84 436 aa16.43■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 GRAPLQ8TC17 118 aaPredicted RBP16.43■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 TAF1DQ9H5J8 278 aaPredicted RBP16.43■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 HACL1Q9UJ83 578 aa16.43■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 IRS4O14654 1257 aaPredicted RBP16.42■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 DDX58O95786 925 aaKnown RBP16.42■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 DPP8Q6V1X1 898 aaPredicted RBP16.42■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 SP8Q8IXZ3 490 aa16.42■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 FAM9BQ8IZU0 186 aa16.42■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 STK31Q9BXU1 1019 aa16.42■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 CHMP4AQ9BY43 222 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms