RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 UTP14AQ9BVJ6 771 aaKnown RBP20.24■□□□□ 0.83
CIT-210ENST00000539413 GPBP1L1Q9HC44 474 aaPredicted RBP20.24■□□□□ 0.83
CIT-210ENST00000539413 FANCIQ9NVI1 1328 aa20.24■□□□□ 0.83
CIT-210ENST00000539413 CRY2Q49AN0 593 aa20.23■□□□□ 0.83
CIT-210ENST00000539413 CCDC30Q5VVM6 783 aa20.23■□□□□ 0.83
CIT-210ENST00000539413 TWISTNBQ3B726 338 aaPredicted RBP20.22■□□□□ 0.83
CIT-210ENST00000539413 C3orf67Q6ZVT6 689 aa20.22■□□□□ 0.83
CIT-210ENST00000539413 ZNF428Q96B54 188 aa20.22■□□□□ 0.83
CIT-210ENST00000539413 TCERG1O14776 1098 aaKnown RBP20.21■□□□□ 0.83
CIT-210ENST00000539413 ISCA1Q9BUE6 129 aa20.21■□□□□ 0.83
CIT-210ENST00000539413 SPINK5Q9NQ38 1064 aaPredicted RBP20.21■□□□□ 0.83
CIT-210ENST00000539413 SBF1O95248 1867 aa20.21■□□□□ 0.83
CIT-210ENST00000539413 ATP5J2-PTCD1G3V325 749 aa20.2■□□□□ 0.82
CIT-210ENST00000539413 LMNB1P20700 586 aa20.2■□□□□ 0.82
CIT-210ENST00000539413 GOLGA2Q08379 1002 aa20.2■□□□□ 0.82
CIT-210ENST00000539413 SLC10A5Q5PT55 438 aa20.2■□□□□ 0.82
CIT-210ENST00000539413 SYNE4Q8N205 404 aa20.2■□□□□ 0.82
CIT-210ENST00000539413 C7orf43Q8WVR3 580 aa20.2■□□□□ 0.82
CIT-210ENST00000539413 CHMP4AQ9BY43 222 aa20.2■□□□□ 0.82
CIT-210ENST00000539413 TRMT112Q9UI30 125 aaKnown RBP20.2■□□□□ 0.82
CIT-210ENST00000539413 RNF123Q5XPI4 1314 aa20.2■□□□□ 0.82
CIT-210ENST00000539413 ALDH1B1P30837 517 aa20.19■□□□□ 0.82
CIT-210ENST00000539413 RIC3Q7Z5B4 369 aa20.19■□□□□ 0.82
CIT-210ENST00000539413 RPGRQ92834 1020 aaKnown RBP20.19■□□□□ 0.82
CIT-210ENST00000539413 FER1L6Q2WGJ9 1857 aa20.19■□□□□ 0.82
CIT-210ENST00000539413 HOXA10P31260 410 aaPredicted RBP20.18■□□□□ 0.82
CIT-210ENST00000539413 SOGA3Q5TF21 947 aa20.18■□□□□ 0.82
CIT-210ENST00000539413 OLFM4Q6UX06 510 aa20.18■□□□□ 0.82
CIT-210ENST00000539413 NLRP3Q96P20 1036 aa20.18■□□□□ 0.82
CIT-210ENST00000539413 HCLS1P14317 486 aaPredicted RBP20.17■□□□□ 0.82
CIT-210ENST00000539413 EXOSC9Q06265 439 aaKnown RBP20.17■□□□□ 0.82
CIT-210ENST00000539413 CCDC93Q567U6 631 aa20.17■□□□□ 0.82
CIT-210ENST00000539413 STK31Q9BXU1 1019 aa20.17■□□□□ 0.82
CIT-210ENST00000539413 TAOK3Q9H2K8 898 aa20.17■□□□□ 0.82
CIT-210ENST00000539413 SH3TC1Q8TE82 1336 aa20.17■□□□□ 0.82
CIT-210ENST00000539413 LTBP3Q9NS15 1303 aa20.17■□□□□ 0.82
CIT-210ENST00000539413 ZNF521Q96K83 1311 aa20.16■□□□□ 0.82
CIT-210ENST00000539413 TIAM2Q8IVF5 1701 aa20.16■□□□□ 0.82
CIT-210ENST00000539413 CCER2I3L3R5 266 aa20.15■□□□□ 0.82
CIT-210ENST00000539413 C1QTNF8P60827 252 aa20.15■□□□□ 0.82
CIT-210ENST00000539413 RBM17Q96I25 401 aaKnown RBP20.15■□□□□ 0.82
CIT-210ENST00000539413 CRAMP1Q96RY5 1269 aa20.15■□□□□ 0.82
CIT-210ENST00000539413 MYD88Q99836 296 aa20.15■□□□□ 0.82
CIT-210ENST00000539413 LAMB2P55268 1798 aa20.14■□□□□ 0.81
CIT-210ENST00000539413 ZC3H4Q9UPT8 1303 aaKnown RBP20.14■□□□□ 0.81
CIT-210ENST00000539413 KIF3CO14782 793 aa20.14■□□□□ 0.81
CIT-210ENST00000539413 VAMP4O75379 141 aa20.14■□□□□ 0.81
CIT-210ENST00000539413 DDX58O95786 925 aaKnown RBP20.14■□□□□ 0.81
CIT-210ENST00000539413 TRIM28Q13263 835 aaKnown RBP20.14■□□□□ 0.81
CIT-210ENST00000539413 G2E3Q7L622 706 aa20.14■□□□□ 0.81
CIT-210ENST00000539413 FAM89AQ96GI7 184 aa20.14■□□□□ 0.81
CIT-210ENST00000539413 MYH16Q9H6N6 1097 aa20.14■□□□□ 0.81
CIT-210ENST00000539413 NMRK2Q9NPI5 230 aa20.14■□□□□ 0.81
CIT-210ENST00000539413 CCDC88AQ3V6T2 1871 aa20.13■□□□□ 0.81
CIT-210ENST00000539413 SLC4A2P04920 1241 aa20.13■□□□□ 0.81
CIT-210ENST00000539413 RTL5Q5HYW3 569 aaPredicted RBP20.13■□□□□ 0.81
CIT-210ENST00000539413 SLC51AQ86UW1 340 aa20.13■□□□□ 0.81
CIT-210ENST00000539413 MAP3K2Q9Y2U5 619 aa20.13■□□□□ 0.81
CIT-210ENST00000539413 DDX60Q8IY21 1712 aaKnown RBP20.13■□□□□ 0.81
CIT-210ENST00000539413 SNED1Q8TER0 1413 aa20.12■□□□□ 0.81
CIT-210ENST00000539413 FKBP4Q02790 459 aaKnown RBP eCLIP20.12■□□□□ 0.81
CIT-210ENST00000539413 METTL22Q9BUU2 404 aaPredicted RBP20.12■□□□□ 0.81
CIT-210ENST00000539413 ABCC4O15439 1325 aa20.11■□□□□ 0.81
CIT-210ENST00000539413 KDM2BQ8NHM5 1336 aa20.11■□□□□ 0.81
CIT-210ENST00000539413 PI4KAP2A4QPH2 592 aa20.11■□□□□ 0.81
CIT-210ENST00000539413 PPEF1O14829 653 aaPredicted RBP20.11■□□□□ 0.81
CIT-210ENST00000539413 KSR2Q6VAB6 950 aa20.11■□□□□ 0.81
CIT-210ENST00000539413 RTKN2Q8IZC4 609 aa20.11■□□□□ 0.81
CIT-210ENST00000539413 PI4KAP1Q8N8J0 262 aa20.11■□□□□ 0.81
CIT-210ENST00000539413 CC2D2BQ6DHV5 1058 aa20.09■□□□□ 0.81
CIT-210ENST00000539413 ZBTB38Q8NAP3 1195 aaPredicted RBP20.09■□□□□ 0.81
CIT-210ENST00000539413 CCDC191Q8NCU4 936 aa20.09■□□□□ 0.81
CIT-210ENST00000539413 ZNF277Q9NRM2 450 aaPredicted RBP20.09■□□□□ 0.81
CIT-210ENST00000539413 DICER1Q9UPY3 1922 aaKnown RBP20.08■□□□□ 0.81
CIT-210ENST00000539413 GLTPD2A6NH11 291 aa20.08■□□□□ 0.81
CIT-210ENST00000539413 IRS4O14654 1257 aaPredicted RBP20.08■□□□□ 0.81
CIT-210ENST00000539413 IGKV5-2P06315 115 aa20.08■□□□□ 0.81
CIT-210ENST00000539413 FLIIQ13045 1269 aa20.08■□□□□ 0.81
CIT-210ENST00000539413 DDX46Q7L014 1031 aaKnown RBP20.08■□□□□ 0.81
CIT-210ENST00000539413 CWC25Q9NXE8 425 aaPredicted RBP20.08■□□□□ 0.81
CIT-210ENST00000539413 SF3B3Q15393 1217 aaKnown RBP20.07■□□□□ 0.8
CIT-210ENST00000539413 DIEXFQ68CQ4 756 aaKnown RBP20.07■□□□□ 0.8
CIT-210ENST00000539413 JARID2Q92833 1246 aaPredicted RBP20.07■□□□□ 0.8
CIT-210ENST00000539413 RRAGCQ9HB90 399 aa20.07■□□□□ 0.8
CIT-210ENST00000539413 ATP6V0A2Q9Y487 856 aa20.07■□□□□ 0.8
CIT-210ENST00000539413 PCCAP05165 728 aaPredicted RBP20.06■□□□□ 0.8
CIT-210ENST00000539413 FKBP5Q13451 457 aaPredicted RBP20.06■□□□□ 0.8
CIT-210ENST00000539413 GRAPQ13588 217 aa20.06■□□□□ 0.8
CIT-210ENST00000539413 GRAPLQ8TC17 118 aaPredicted RBP20.06■□□□□ 0.8
CIT-210ENST00000539413 PSMD1Q99460 953 aa20.06■□□□□ 0.8
CIT-210ENST00000539413 BBOX1O75936 387 aa20.05■□□□□ 0.8
CIT-210ENST00000539413 IARSP41252 1262 aaKnown RBP20.05■□□□□ 0.8
CIT-210ENST00000539413 NEXNQ0ZGT2 675 aa20.05■□□□□ 0.8
CIT-210ENST00000539413 CWF19L2Q2TBE0 894 aaKnown RBP20.05■□□□□ 0.8
CIT-210ENST00000539413 COL4A1P02462 1669 aa20.04■□□□□ 0.8
CIT-210ENST00000539413 GRIPAP1Q4V328 841 aa20.04■□□□□ 0.8
CIT-210ENST00000539413 DPY19L2Q6NUT2 758 aa20.04■□□□□ 0.8
CIT-210ENST00000539413 MIER1Q8N108 512 aa20.04■□□□□ 0.8
CIT-210ENST00000539413 TAF1P21675 1872 aa20.03■□□□□ 0.8
CIT-210ENST00000539413 NEURL1BA8MQ27 555 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms