RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 E9PSI1 815 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 TNFRSF10AO00220 468 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 PRPF40AO75400 957 aaKnown RBP1.72□□□□□ -2.13
HIF1A-204ENST00000539097 INHAP05111 366 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 PCSK2P16519 638 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 SOX18P35713 384 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 TXLNAP40222 546 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 GDF10P55107 478 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 USPL1Q5W0Q7 1092 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 TMC4Q7Z404 712 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 MAP4K3Q8IVH8 894 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 RSRP1Q9BUV0 290 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 C2orf49Q9BVC5 232 aaPredicted RBP1.72□□□□□ -2.13
HIF1A-204ENST00000539097 KRTAP9-8Q9BYQ0 159 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 ZNF395Q9H8N7 513 aaPredicted RBP1.72□□□□□ -2.13
HIF1A-204ENST00000539097 FNDC3AQ9Y2H6 1198 aaKnown RBP1.72□□□□□ -2.13
HIF1A-204ENST00000539097 SHROOM4Q9ULL8 1493 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 ADH1CP00326 375 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 SMTNP53814 917 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 PSMA6P60900 246 aaKnown RBP1.72□□□□□ -2.13
HIF1A-204ENST00000539097 PSME1Q06323 249 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 MRPL58Q14197 206 aaKnown RBP1.72□□□□□ -2.13
HIF1A-204ENST00000539097 RC3H1Q5TC82 1133 aaKnown RBP1.72□□□□□ -2.13
HIF1A-204ENST00000539097 ILDR2Q71H61 639 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 METTL16Q86W50 562 aaKnown RBP1.72□□□□□ -2.13
HIF1A-204ENST00000539097 NANOS1Q8WY41 292 aaKnown RBP1.72□□□□□ -2.13
HIF1A-204ENST00000539097 SLC10A4Q96EP9 437 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 TGIF2Q9GZN2 237 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 SCHIP1Q9P0W5 487 aaPredicted RBP1.72□□□□□ -2.13
HIF1A-204ENST00000539097 TRAK1Q9UPV9 953 aa1.72□□□□□ -2.13
HIF1A-204ENST00000539097 ADH1AP07327 375 aa1.71□□□□□ -2.14
HIF1A-204ENST00000539097 BMP1P13497 986 aa1.71□□□□□ -2.14
HIF1A-204ENST00000539097 BRD2P25440 801 aaKnown RBP1.71□□□□□ -2.14
HIF1A-204ENST00000539097 PTGIRP43119 386 aa1.71□□□□□ -2.14
HIF1A-204ENST00000539097 EIF1AXP47813 144 aaKnown RBP1.71□□□□□ -2.14
HIF1A-204ENST00000539097 HP1BP3Q5SSJ5 553 aaPredicted RBP1.71□□□□□ -2.14
HIF1A-204ENST00000539097 NOC4LQ9BVI4 516 aaKnown RBP1.71□□□□□ -2.14
HIF1A-204ENST00000539097 BCL2L13Q9BXK5 485 aa1.71□□□□□ -2.14
HIF1A-204ENST00000539097 FHDC1Q9C0D6 1143 aaPredicted RBP1.71□□□□□ -2.14
HIF1A-204ENST00000539097 BIN2Q9UBW5 565 aaPredicted RBP1.71□□□□□ -2.14
HIF1A-204ENST00000539097 RGS17Q9UGC6 210 aaPredicted RBP1.71□□□□□ -2.14
HIF1A-204ENST00000539097 PCDHGB7Q9Y5F8 929 aa1.71□□□□□ -2.14
HIF1A-204ENST00000539097 CCDC163A0A0D9SF12 145 aa1.71□□□□□ -2.14
HIF1A-204ENST00000539097 ZBTB24O43167 697 aaPredicted RBP1.71□□□□□ -2.14
HIF1A-204ENST00000539097 GTF2E1P29083 439 aaPredicted RBP1.71□□□□□ -2.14
HIF1A-204ENST00000539097 DAB2P98082 770 aa1.71□□□□□ -2.14
HIF1A-204ENST00000539097 RBL2Q08999 1139 aa1.71□□□□□ -2.14
HIF1A-204ENST00000539097 PDE12Q6L8Q7 609 aaKnown RBP1.71□□□□□ -2.14
HIF1A-204ENST00000539097 VASH1Q7L8A9 365 aaPredicted RBP1.71□□□□□ -2.14
HIF1A-204ENST00000539097 SLC9A9Q8IVB4 645 aa1.71□□□□□ -2.14
HIF1A-204ENST00000539097 RASGRP4Q8TDF6 673 aa1.71□□□□□ -2.14
HIF1A-204ENST00000539097 KRTAP4-11Q9BYQ6 195 aa1.71□□□□□ -2.14
HIF1A-204ENST00000539097 FRRS1LQ9P0K9 344 aa1.71□□□□□ -2.14
HIF1A-204ENST00000539097 LONRF2Q1L5Z9 754 aa1.71□□□□□ -2.14
HIF1A-204ENST00000539097 FIGNL1Q6PIW4 674 aa1.71□□□□□ -2.14
HIF1A-204ENST00000539097 RBBP8NLQ8NC74 664 aaPredicted RBP1.71□□□□□ -2.14
HIF1A-204ENST00000539097 CNKSR1Q969H4 720 aa1.71□□□□□ -2.14
HIF1A-204ENST00000539097 HSH2DQ96JZ2 352 aa1.71□□□□□ -2.14
HIF1A-204ENST00000539097 LRRC3Q9BY71 257 aa1.71□□□□□ -2.14
HIF1A-204ENST00000539097 MUC3BQ9H195 1237 aa1.71□□□□□ -2.14
HIF1A-204ENST00000539097 GGNBP2Q9H3C7 697 aa1.71□□□□□ -2.14
HIF1A-204ENST00000539097 TREHO43280 583 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 ATP4AP20648 1035 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 RACK1P63244 317 aaKnown RBP1.7□□□□□ -2.14
HIF1A-204ENST00000539097 CLN3Q13286 438 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 TSNAXIP1Q2TAA8 658 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 ZNF394Q53GI3 561 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 ESYT1Q9BSJ8 1104 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 USP31Q70CQ4 1352 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 PIK3R2O00459 728 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 OPLAHO14841 1288 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 EPB42P16452 691 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 MAPK1P28482 360 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 CTSOP43234 321 aaPredicted RBP1.7□□□□□ -2.14
HIF1A-204ENST00000539097 VEGFBP49765 207 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 ZNF143P52747 638 aaPredicted RBP1.7□□□□□ -2.14
HIF1A-204ENST00000539097 HDLBPQ00341 1268 aaKnown RBP1.7□□□□□ -2.14
HIF1A-204ENST00000539097 NFX1Q12986 1120 aaKnown RBP1.7□□□□□ -2.14
HIF1A-204ENST00000539097 ENOX2Q16206 610 aaKnown RBP1.7□□□□□ -2.14
HIF1A-204ENST00000539097 MEI1Q5TIA1 1274 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 Q6ZNB5 142 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 EHBP1Q8NDI1 1231 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 HPS1Q92902 700 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 SENP2Q9HC62 589 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 PPP4R2Q9NY27 417 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 CACNA2D2Q9NY47 1150 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 DACH1Q9UI36 760 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 SOBPA7XYQ1 873 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 SCAMP3O14828 347 aaKnown RBP1.7□□□□□ -2.14
HIF1A-204ENST00000539097 NDUFB5O43674 189 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 KIF4AO95239 1232 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 FAM157BP0CG42 384 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 ACPPP15309 386 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 TIMP2P16035 220 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 PLCB3Q01970 1234 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 HLTFQ14527 1009 aaKnown RBP eCLIP1.7□□□□□ -2.14
HIF1A-204ENST00000539097 GLYCTKQ8IVS8 523 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 GALNT12Q8IXK2 581 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 NGLY1Q96IV0 654 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 SEC16BQ96JE7 1060 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms