RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 RAB44Q7Z6P3 723 aaPredicted RBP9.38□□□□□ -0.91
SSPN-206ENST00000539019 SUV39H2Q9H5I1 410 aa9.38□□□□□ -0.91
SSPN-206ENST00000539019 BCS1LQ9Y276 419 aa9.38□□□□□ -0.91
SSPN-206ENST00000539019 MROH2BQ7Z745 1585 aa9.38□□□□□ -0.91
SSPN-206ENST00000539019 ELOA3CA0A087WX78 387 aaPredicted RBP9.37□□□□□ -0.91
SSPN-206ENST00000539019 ELOA3DA6NLF2 546 aaPredicted RBP9.37□□□□□ -0.91
SSPN-206ENST00000539019 SIN3BO75182 1162 aa9.37□□□□□ -0.91
SSPN-206ENST00000539019 COL8A1P27658 744 aa9.37□□□□□ -0.91
SSPN-206ENST00000539019 ELOA3BQ3SY89 546 aa9.37□□□□□ -0.91
SSPN-206ENST00000539019 ELOA3Q8NG57 546 aa9.37□□□□□ -0.91
SSPN-206ENST00000539019 MDFIQ99750 246 aa9.37□□□□□ -0.91
SSPN-206ENST00000539019 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.37□□□□□ -0.91
SSPN-206ENST00000539019 FOXO3O43524 673 aa9.37□□□□□ -0.91
SSPN-206ENST00000539019 KLK14Q9P0G3 267 aa9.37□□□□□ -0.91
SSPN-206ENST00000539019 ZMIZ1Q9ULJ6 1067 aa9.37□□□□□ -0.91
SSPN-206ENST00000539019 ITGB2P05107 769 aa9.36□□□□□ -0.91
SSPN-206ENST00000539019 ALAS2P22557 587 aa9.36□□□□□ -0.91
SSPN-206ENST00000539019 ELOAQ14241 798 aaKnown RBP9.36□□□□□ -0.91
SSPN-206ENST00000539019 PLA2G4EQ3MJ16 856 aa9.36□□□□□ -0.91
SSPN-206ENST00000539019 DMGDHQ9UI17 866 aaKnown RBP9.36□□□□□ -0.91
SSPN-206ENST00000539019 CC2D2AQ9P2K1 1620 aa9.35□□□□□ -0.91
SSPN-206ENST00000539019 ADARB2-AS1A8MUL3 147 aa9.35□□□□□ -0.91
SSPN-206ENST00000539019 TGFBR3LH3BV60 316 aa9.35□□□□□ -0.91
SSPN-206ENST00000539019 GNB5O14775 395 aa9.35□□□□□ -0.91
SSPN-206ENST00000539019 IER5Q5VY09 327 aa9.35□□□□□ -0.91
SSPN-206ENST00000539019 VTI1AQ96AJ9 217 aa9.35□□□□□ -0.91
SSPN-206ENST00000539019 PRIMPOLQ96LW4 560 aa9.35□□□□□ -0.91
SSPN-206ENST00000539019 QTRT2Q9H974 415 aaKnown RBP9.35□□□□□ -0.91
SSPN-206ENST00000539019 RSF1Q96T23 1441 aaPredicted RBP9.34□□□□□ -0.91
SSPN-206ENST00000539019 SMARCA4P51532 1647 aa9.34□□□□□ -0.91
SSPN-206ENST00000539019 NCAPD3P42695 1498 aa9.34□□□□□ -0.91
SSPN-206ENST00000539019 ATAD2BQ9ULI0 1458 aa9.34□□□□□ -0.91
SSPN-206ENST00000539019 KRBA1A5PL33 1030 aa9.34□□□□□ -0.91
SSPN-206ENST00000539019 PIK3R2O00459 728 aa9.34□□□□□ -0.91
SSPN-206ENST00000539019 IGHA1P01876 353 aa9.34□□□□□ -0.91
SSPN-206ENST00000539019 NEUROD1Q13562 356 aa9.34□□□□□ -0.91
SSPN-206ENST00000539019 DGKZQ13574 1117 aa9.34□□□□□ -0.91
SSPN-206ENST00000539019 TNFRSF25Q93038 417 aa9.34□□□□□ -0.91
SSPN-206ENST00000539019 BHMTQ93088 406 aa9.34□□□□□ -0.91
SSPN-206ENST00000539019 ACIN1Q9UKV3 1341 aaKnown RBP9.33□□□□□ -0.92
SSPN-206ENST00000539019 PEG3Q9GZU2 1588 aa9.33□□□□□ -0.92
SSPN-206ENST00000539019 BAZ1AQ9NRL2 1556 aaPredicted RBP9.33□□□□□ -0.92
SSPN-206ENST00000539019 ARID3CA6NKF2 412 aa9.33□□□□□ -0.92
SSPN-206ENST00000539019 FAM69CQ0P6D2 419 aa9.33□□□□□ -0.92
SSPN-206ENST00000539019 STK32AQ8WU08 396 aa9.33□□□□□ -0.92
SSPN-206ENST00000539019 PRMT3O60678 531 aa9.32□□□□□ -0.92
SSPN-206ENST00000539019 ATG7O95352 703 aa9.32□□□□□ -0.92
SSPN-206ENST00000539019 FKBP5Q13451 457 aaPredicted RBP9.32□□□□□ -0.92
SSPN-206ENST00000539019 SWI5Q1ZZU3 235 aa9.32□□□□□ -0.92
SSPN-206ENST00000539019 GSX2Q9BZM3 304 aa9.32□□□□□ -0.92
SSPN-206ENST00000539019 C11orf91Q3C1V1 193 aa9.31□□□□□ -0.92
SSPN-206ENST00000539019 CCDC97Q96F63 343 aaPredicted RBP9.31□□□□□ -0.92
SSPN-206ENST00000539019 MYO19Q96H55 970 aa9.31□□□□□ -0.92
SSPN-206ENST00000539019 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.31□□□□□ -0.92
SSPN-206ENST00000539019 SERPINA10Q9UK55 444 aa9.31□□□□□ -0.92
SSPN-206ENST00000539019 LRFN2Q9ULH4 789 aa9.31□□□□□ -0.92
SSPN-206ENST00000539019 STARD13Q9Y3M8 1113 aa9.31□□□□□ -0.92
SSPN-206ENST00000539019 GRNP28799 593 aaKnown RBP9.3□□□□□ -0.92
SSPN-206ENST00000539019 INPP5BP32019 993 aa9.3□□□□□ -0.92
SSPN-206ENST00000539019 ADH7P40394 386 aa9.3□□□□□ -0.92
SSPN-206ENST00000539019 IDH3AP50213 366 aa9.3□□□□□ -0.92
SSPN-206ENST00000539019 ALYREFQ86V81 257 aaKnown RBP9.3□□□□□ -0.92
SSPN-206ENST00000539019 TRIM11Q96F44 468 aa9.3□□□□□ -0.92
SSPN-206ENST00000539019 MSTNO14793 375 aa9.29□□□□□ -0.92
SSPN-206ENST00000539019 MICAL2O94851 1124 aa9.29□□□□□ -0.92
SSPN-206ENST00000539019 CCINQ13939 588 aa9.29□□□□□ -0.92
SSPN-206ENST00000539019 OCLNQ16625 522 aa9.29□□□□□ -0.92
SSPN-206ENST00000539019 PLVAPQ9BX97 442 aa9.29□□□□□ -0.92
SSPN-206ENST00000539019 IGFLR1Q9H665 355 aa9.29□□□□□ -0.92
SSPN-206ENST00000539019 NOP53Q9NZM5 478 aaKnown RBP9.29□□□□□ -0.92
SSPN-206ENST00000539019 M0R082 166 aa9.28□□□□□ -0.92
SSPN-206ENST00000539019 COX20Q5RI15 118 aa9.28□□□□□ -0.92
SSPN-206ENST00000539019 TMEM164Q5U3C3 297 aa9.28□□□□□ -0.92
SSPN-206ENST00000539019 ZNF417Q8TAU3 575 aa9.28□□□□□ -0.92
SSPN-206ENST00000539019 PBXIP1Q96AQ6 731 aa9.28□□□□□ -0.92
SSPN-206ENST00000539019 IFT43Q96FT9 208 aa9.28□□□□□ -0.92
SSPN-206ENST00000539019 ZNF587Q96SQ5 575 aaPredicted RBP9.28□□□□□ -0.92
SSPN-206ENST00000539019 SPOCK3Q9BQ16 436 aa9.28□□□□□ -0.92
SSPN-206ENST00000539019 ALBP02768 609 aa9.27□□□□□ -0.93
SSPN-206ENST00000539019 TBC1D8BQ0IIM8 1120 aa9.27□□□□□ -0.93
SSPN-206ENST00000539019 C8orf86Q6ZUL3 223 aa9.27□□□□□ -0.93
SSPN-206ENST00000539019 MICALL1Q8N3F8 863 aa9.27□□□□□ -0.93
SSPN-206ENST00000539019 UBE2OQ9C0C9 1292 aaKnown RBP9.27□□□□□ -0.93
SSPN-206ENST00000539019 EFCC1Q9HA90 598 aa9.27□□□□□ -0.93
SSPN-206ENST00000539019 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.27□□□□□ -0.93
SSPN-206ENST00000539019 EPB42P16452 691 aa9.26□□□□□ -0.93
SSPN-206ENST00000539019 ARSDP51689 593 aa9.26□□□□□ -0.93
SSPN-206ENST00000539019 PNMA5Q96PV4 448 aa9.26□□□□□ -0.93
SSPN-206ENST00000539019 OPLAHO14841 1288 aa9.25□□□□□ -0.93
SSPN-206ENST00000539019 PROCP04070 461 aa9.25□□□□□ -0.93
SSPN-206ENST00000539019 NFKB1P19838 968 aa9.25□□□□□ -0.93
SSPN-206ENST00000539019 COL9A3Q14050 684 aaPredicted RBP9.25□□□□□ -0.93
SSPN-206ENST00000539019 C20orf204Q6ZNR8 217 aa9.25□□□□□ -0.93
SSPN-206ENST00000539019 SAP130Q9H0E3 1048 aa9.25□□□□□ -0.93
SSPN-206ENST00000539019 CAPN12Q6ZSI9 719 aa9.24□□□□□ -0.93
SSPN-206ENST00000539019 CXXC1Q9P0U4 656 aaPredicted RBP9.24□□□□□ -0.93
SSPN-206ENST00000539019 USP20Q9Y2K6 914 aa9.24□□□□□ -0.93
SSPN-206ENST00000539019 SUZ12Q15022 739 aaKnown RBP9.24□□□□□ -0.93
SSPN-206ENST00000539019 KRT25Q7Z3Z0 450 aa9.24□□□□□ -0.93
SSPN-206ENST00000539019 TREML1Q86YW5 311 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms