RNA–Protein interactions for RNA: ENST00000538454.2

MDM1-208, Transcript of Mdm1 nuclear protein, humanhuman

TSL 3

Gene MDM1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-208ENST00000538454 TNFRSF25Q93038 417 aa9.76□□□□□ -0.85
MDM1-208ENST00000538454 TRIM11Q96F44 468 aa9.76□□□□□ -0.85
MDM1-208ENST00000538454 RTN1Q16799 776 aa9.75□□□□□ -0.85
MDM1-208ENST00000538454 ADH7P40394 386 aa9.74□□□□□ -0.85
MDM1-208ENST00000538454 BHMTQ93088 406 aa9.74□□□□□ -0.85
MDM1-208ENST00000538454 ARXQ96QS3 562 aa9.74□□□□□ -0.85
MDM1-208ENST00000538454 PLVAPQ9BX97 442 aa9.74□□□□□ -0.85
MDM1-208ENST00000538454 LOC100996750A0A140TA64 210 aa9.73□□□□□ -0.85
MDM1-208ENST00000538454 CDCA8Q53HL2 280 aa9.73□□□□□ -0.85
MDM1-208ENST00000538454 KRTAP4-6Q9BYQ5 205 aa9.73□□□□□ -0.85
MDM1-208ENST00000538454 C1QTNF9BB2RNN3 333 aa9.72□□□□□ -0.85
MDM1-208ENST00000538454 TGFBR3LH3BV60 316 aa9.72□□□□□ -0.85
MDM1-208ENST00000538454 M0R082 166 aa9.72□□□□□ -0.85
MDM1-208ENST00000538454 IER5Q5VY09 327 aa9.72□□□□□ -0.85
MDM1-208ENST00000538454 ZNF417Q8TAU3 575 aa9.72□□□□□ -0.85
MDM1-208ENST00000538454 ZNF587Q96SQ5 575 aaPredicted RBP9.72□□□□□ -0.85
MDM1-208ENST00000538454 ALBP02768 609 aa9.71□□□□□ -0.86
MDM1-208ENST00000538454 RFX1P22670 979 aa9.71□□□□□ -0.86
MDM1-208ENST00000538454 CHRNA4P43681 627 aa9.71□□□□□ -0.86
MDM1-208ENST00000538454 BAG6P46379 1132 aa9.71□□□□□ -0.86
MDM1-208ENST00000538454 TBC1D8BQ0IIM8 1120 aa9.71□□□□□ -0.86
MDM1-208ENST00000538454 STARD13Q9Y3M8 1113 aa9.71□□□□□ -0.86
MDM1-208ENST00000538454 CD163Q86VB7 1156 aa9.7□□□□□ -0.86
MDM1-208ENST00000538454 FAM200AQ8TCP9 573 aa9.7□□□□□ -0.86
MDM1-208ENST00000538454 VTI1AQ96AJ9 217 aa9.7□□□□□ -0.86
MDM1-208ENST00000538454 BCS1LQ9Y276 419 aa9.7□□□□□ -0.86
MDM1-208ENST00000538454 FOXO3O43524 673 aa9.69□□□□□ -0.86
MDM1-208ENST00000538454 ADAM23O75077 832 aa9.69□□□□□ -0.86
MDM1-208ENST00000538454 WEE1P30291 646 aa9.69□□□□□ -0.86
MDM1-208ENST00000538454 UBE2OQ9C0C9 1292 aaKnown RBP9.69□□□□□ -0.86
MDM1-208ENST00000538454 IGFLR1Q9H665 355 aa9.69□□□□□ -0.86
MDM1-208ENST00000538454 KLK14Q9P0G3 267 aa9.69□□□□□ -0.86
MDM1-208ENST00000538454 SPDYE3A6NKU9 549 aa9.68□□□□□ -0.86
MDM1-208ENST00000538454 SPATA31C1P0DKV0 1188 aa9.68□□□□□ -0.86
MDM1-208ENST00000538454 DGKZQ13574 1117 aa9.68□□□□□ -0.86
MDM1-208ENST00000538454 C8orf86Q6ZUL3 223 aa9.68□□□□□ -0.86
MDM1-208ENST00000538454 MICALL1Q8N3F8 863 aa9.68□□□□□ -0.86
MDM1-208ENST00000538454 PNMA5Q96PV4 448 aa9.68□□□□□ -0.86
MDM1-208ENST00000538454 QTRT2Q9H974 415 aaKnown RBP9.67□□□□□ -0.86
MDM1-208ENST00000538454 PRDM6Q9NQX0 595 aa9.67□□□□□ -0.86
MDM1-208ENST00000538454 DMGDHQ9UI17 866 aaKnown RBP9.67□□□□□ -0.86
MDM1-208ENST00000538454 NOVA2Q9UNW9 492 aaKnown RBP9.67□□□□□ -0.86
MDM1-208ENST00000538454 EPB42P16452 691 aa9.66□□□□□ -0.86
MDM1-208ENST00000538454 IDH3AP50213 366 aa9.66□□□□□ -0.86
MDM1-208ENST00000538454 PRRT3Q5FWE3 981 aa9.66□□□□□ -0.86
MDM1-208ENST00000538454 GSX2Q9BZM3 304 aa9.66□□□□□ -0.86
MDM1-208ENST00000538454 K7ELQ4 463 aaPredicted RBP9.65□□□□□ -0.86
MDM1-208ENST00000538454 FURINP09958 794 aa9.65□□□□□ -0.86
MDM1-208ENST00000538454 NFKB1P19838 968 aa9.65□□□□□ -0.86
MDM1-208ENST00000538454 CCINQ13939 588 aa9.65□□□□□ -0.86
MDM1-208ENST00000538454 COL9A3Q14050 684 aaPredicted RBP9.65□□□□□ -0.86
MDM1-208ENST00000538454 EFCC1Q9HA90 598 aa9.65□□□□□ -0.86
MDM1-208ENST00000538454 SLC6A14Q9UN76 642 aa9.65□□□□□ -0.86
MDM1-208ENST00000538454 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.65□□□□□ -0.86
MDM1-208ENST00000538454 FAM229AH3BQW9 127 aa9.64□□□□□ -0.87
MDM1-208ENST00000538454 C20orf204Q6ZNR8 217 aa9.64□□□□□ -0.87
MDM1-208ENST00000538454 NID1P14543 1247 aa9.63□□□□□ -0.87
MDM1-208ENST00000538454 GRNP28799 593 aaKnown RBP9.63□□□□□ -0.87
MDM1-208ENST00000538454 INPP5BP32019 993 aa9.63□□□□□ -0.87
MDM1-208ENST00000538454 ARSDP51689 593 aa9.63□□□□□ -0.87
MDM1-208ENST00000538454 MYO19Q96H55 970 aa9.63□□□□□ -0.87
MDM1-208ENST00000538454 DNAJB12Q9NXW2 375 aaKnown RBP9.63□□□□□ -0.87
MDM1-208ENST00000538454 LILRB5O75023 590 aa9.62□□□□□ -0.87
MDM1-208ENST00000538454 C11orf91Q3C1V1 193 aa9.62□□□□□ -0.87
MDM1-208ENST00000538454 PRIMPOLQ96LW4 560 aa9.62□□□□□ -0.87
MDM1-208ENST00000538454 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.62□□□□□ -0.87
MDM1-208ENST00000538454 MICAL2O94851 1124 aa9.61□□□□□ -0.87
MDM1-208ENST00000538454 APBA3O96018 575 aa9.61□□□□□ -0.87
MDM1-208ENST00000538454 TRIM28Q13263 835 aaKnown RBP9.61□□□□□ -0.87
MDM1-208ENST00000538454 FKBP5Q13451 457 aaPredicted RBP9.61□□□□□ -0.87
MDM1-208ENST00000538454 KRT25Q7Z3Z0 450 aa9.61□□□□□ -0.87
MDM1-208ENST00000538454 NUDT8Q8WV74 236 aa9.61□□□□□ -0.87
MDM1-208ENST00000538454 JPH1Q9HDC5 661 aaPredicted RBP9.61□□□□□ -0.87
MDM1-208ENST00000538454 ZMIZ1Q9ULJ6 1067 aa9.61□□□□□ -0.87
MDM1-208ENST00000538454 ACIN1Q9UKV3 1341 aaKnown RBP9.6□□□□□ -0.87
MDM1-208ENST00000538454 PRMT3O60678 531 aa9.6□□□□□ -0.87
MDM1-208ENST00000538454 GATA4P43694 442 aa9.6□□□□□ -0.87
MDM1-208ENST00000538454 SWI5Q1ZZU3 235 aa9.6□□□□□ -0.87
MDM1-208ENST00000538454 TRAPPC3LQ5T215 181 aa9.6□□□□□ -0.87
MDM1-208ENST00000538454 NAGPAQ9UK23 515 aa9.6□□□□□ -0.87
MDM1-208ENST00000538454 LRFN2Q9ULH4 789 aa9.6□□□□□ -0.87
MDM1-208ENST00000538454 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.59□□□□□ -0.87
MDM1-208ENST00000538454 DOC2BQ14184 412 aa9.59□□□□□ -0.87
MDM1-208ENST00000538454 PSAPL1Q6NUJ1 521 aa9.59□□□□□ -0.87
MDM1-208ENST00000538454 STK32AQ8WU08 396 aa9.59□□□□□ -0.87
MDM1-208ENST00000538454 IFT43Q96FT9 208 aa9.59□□□□□ -0.87
MDM1-208ENST00000538454 ELOAQ14241 798 aaKnown RBP9.58□□□□□ -0.88
MDM1-208ENST00000538454 GRIK4Q16099 956 aa9.57□□□□□ -0.88
MDM1-208ENST00000538454 NACC1Q96RE7 527 aa9.57□□□□□ -0.88
MDM1-208ENST00000538454 ZFATQ9P243 1243 aa9.57□□□□□ -0.88
MDM1-208ENST00000538454 USP20Q9Y2K6 914 aa9.57□□□□□ -0.88
MDM1-208ENST00000538454 RGS9O75916 674 aaPredicted RBP9.56□□□□□ -0.88
MDM1-208ENST00000538454 SASH3O75995 380 aa9.56□□□□□ -0.88
MDM1-208ENST00000538454 MAP3K6O95382 1288 aa9.56□□□□□ -0.88
MDM1-208ENST00000538454 RARAP10276 462 aa9.56□□□□□ -0.88
MDM1-208ENST00000538454 CPB1P15086 417 aa9.56□□□□□ -0.88
MDM1-208ENST00000538454 TARSP26639 723 aaKnown RBP9.56□□□□□ -0.88
MDM1-208ENST00000538454 COX20Q5RI15 118 aa9.56□□□□□ -0.88
MDM1-208ENST00000538454 DHX32Q7L7V1 743 aaKnown RBP9.56□□□□□ -0.88
MDM1-208ENST00000538454 FAM35AQ86V20 835 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms