RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 BCAR3O75815 825 aa16.78■□□□□ 0.28
CHFR-216ENST00000538235 CWF19L2Q2TBE0 894 aaKnown RBP16.78■□□□□ 0.28
CHFR-216ENST00000538235 METTL22Q9BUU2 404 aaPredicted RBP16.78■□□□□ 0.28
CHFR-216ENST00000538235 CD2APQ9Y5K6 639 aa16.78■□□□□ 0.28
CHFR-216ENST00000538235 A0A1B0GUL6 1792 aa16.77■□□□□ 0.28
CHFR-216ENST00000538235 LRRC37AA6NMS7 1700 aa16.77■□□□□ 0.28
CHFR-216ENST00000538235 DPEP1P16444 411 aa16.77■□□□□ 0.28
CHFR-216ENST00000538235 FKBP5Q13451 457 aaPredicted RBP16.77■□□□□ 0.28
CHFR-216ENST00000538235 RIC3Q7Z5B4 369 aa16.77■□□□□ 0.28
CHFR-216ENST00000538235 NBPF5PQ86XG9 351 aaPredicted RBP16.77■□□□□ 0.28
CHFR-216ENST00000538235 CNBD1Q8NA66 436 aa16.77■□□□□ 0.28
CHFR-216ENST00000538235 JARID2Q92833 1246 aaPredicted RBP16.77■□□□□ 0.28
CHFR-216ENST00000538235 SMC4Q9NTJ3 1288 aa16.77■□□□□ 0.28
CHFR-216ENST00000538235 A0A0G2JLW4 131 aa16.76■□□□□ 0.27
CHFR-216ENST00000538235 ALDH1L2Q3SY69 923 aa16.76■□□□□ 0.27
CHFR-216ENST00000538235 UTRNP46939 3433 aa16.76■□□□□ 0.27
CHFR-216ENST00000538235 FER1L6Q2WGJ9 1857 aa16.76■□□□□ 0.27
CHFR-216ENST00000538235 CT47B1P0C2W7 299 aaPredicted RBP16.75■□□□□ 0.27
CHFR-216ENST00000538235 YBX3P16989 372 aaKnown RBP eCLIP16.75■□□□□ 0.27
CHFR-216ENST00000538235 DNAAF4Q8WXU2 420 aa16.75■□□□□ 0.27
CHFR-216ENST00000538235 CCDC88AQ3V6T2 1871 aa16.75■□□□□ 0.27
CHFR-216ENST00000538235 SBF1O95248 1867 aa16.74■□□□□ 0.27
CHFR-216ENST00000538235 NEURL1BA8MQ27 555 aa16.74■□□□□ 0.27
CHFR-216ENST00000538235 RTL5Q5HYW3 569 aaPredicted RBP16.74■□□□□ 0.27
CHFR-216ENST00000538235 BEND3Q5T5X7 828 aa16.74■□□□□ 0.27
CHFR-216ENST00000538235 BRPF1P55201 1214 aaPredicted RBP16.73■□□□□ 0.27
CHFR-216ENST00000538235 CASP7P55210 303 aa16.73■□□□□ 0.27
CHFR-216ENST00000538235 TRIM28Q13263 835 aaKnown RBP16.73■□□□□ 0.27
CHFR-216ENST00000538235 PARP10Q53GL7 1025 aa16.73■□□□□ 0.27
CHFR-216ENST00000538235 HSP90AB3PQ58FF7 597 aa16.73■□□□□ 0.27
CHFR-216ENST00000538235 FAM89AQ96GI7 184 aa16.73■□□□□ 0.27
CHFR-216ENST00000538235 NOB1Q9ULX3 412 aaKnown RBP16.73■□□□□ 0.27
CHFR-216ENST00000538235 LTBP1Q14766 1721 aa16.73■□□□□ 0.27
CHFR-216ENST00000538235 KLRG2A4D1S0 409 aaPredicted RBP16.72■□□□□ 0.27
CHFR-216ENST00000538235 HCLS1P14317 486 aaPredicted RBP16.72■□□□□ 0.27
CHFR-216ENST00000538235 UTP14AQ9BVJ6 771 aaKnown RBP16.72■□□□□ 0.27
CHFR-216ENST00000538235 SNED1Q8TER0 1413 aa16.71■□□□□ 0.27
CHFR-216ENST00000538235 DDX58O95786 925 aaKnown RBP16.71■□□□□ 0.27
CHFR-216ENST00000538235 BRIP1Q9BX63 1249 aa16.71■□□□□ 0.27
CHFR-216ENST00000538235 CHD4Q14839 1912 aa16.7■□□□□ 0.26
CHFR-216ENST00000538235 CRY2Q49AN0 593 aa16.7■□□□□ 0.26
CHFR-216ENST00000538235 C2CD5Q86YS7 1000 aa16.7■□□□□ 0.26
CHFR-216ENST00000538235 TRMT112Q9UI30 125 aaKnown RBP16.7■□□□□ 0.26
CHFR-216ENST00000538235 ABCC4O15439 1325 aa16.7■□□□□ 0.26
CHFR-216ENST00000538235 PTPRCP08575 1304 aa16.7■□□□□ 0.26
CHFR-216ENST00000538235 SRGNP10124 158 aa16.69■□□□□ 0.26
CHFR-216ENST00000538235 TRIM27P14373 513 aa16.69■□□□□ 0.26
CHFR-216ENST00000538235 TGFB2P61812 414 aa16.69■□□□□ 0.26
CHFR-216ENST00000538235 ST5P78524 1137 aa16.69■□□□□ 0.26
CHFR-216ENST00000538235 GCKRQ14397 625 aa16.69■□□□□ 0.26
CHFR-216ENST00000538235 SLC10A5Q5PT55 438 aa16.69■□□□□ 0.26
CHFR-216ENST00000538235 TPTE2Q6XPS3 522 aa16.69■□□□□ 0.26
CHFR-216ENST00000538235 CCDC191Q8NCU4 936 aa16.69■□□□□ 0.26
CHFR-216ENST00000538235 LINS1Q8NG48 757 aa16.69■□□□□ 0.26
CHFR-216ENST00000538235 CHMP4AQ9BY43 222 aa16.69■□□□□ 0.26
CHFR-216ENST00000538235 CWC25Q9NXE8 425 aaPredicted RBP16.69■□□□□ 0.26
CHFR-216ENST00000538235 SH3TC1Q8TE82 1336 aa16.69■□□□□ 0.26
CHFR-216ENST00000538235 DUOX1Q9NRD9 1551 aa16.68■□□□□ 0.26
CHFR-216ENST00000538235 PCCAP05165 728 aaPredicted RBP16.68■□□□□ 0.26
CHFR-216ENST00000538235 PPP1R42Q7Z4L9 355 aa16.68■□□□□ 0.26
CHFR-216ENST00000538235 NYXQ9GZU5 481 aa16.68■□□□□ 0.26
CHFR-216ENST00000538235 RNF123Q5XPI4 1314 aa16.68■□□□□ 0.26
CHFR-216ENST00000538235 TIAM2Q8IVF5 1701 aa16.67■□□□□ 0.26
CHFR-216ENST00000538235 H7C1W4 665 aa16.67■□□□□ 0.26
CHFR-216ENST00000538235 RLBP1P12271 317 aa16.67■□□□□ 0.26
CHFR-216ENST00000538235 SLC4A10Q6U841 1118 aa16.67■□□□□ 0.26
CHFR-216ENST00000538235 OLFM4Q6UX06 510 aa16.67■□□□□ 0.26
CHFR-216ENST00000538235 ZBTB38Q8NAP3 1195 aaPredicted RBP16.67■□□□□ 0.26
CHFR-216ENST00000538235 EPHA10Q5JZY3 1008 aa16.66■□□□□ 0.26
CHFR-216ENST00000538235 UBE3BQ7Z3V4 1068 aa16.66■□□□□ 0.26
CHFR-216ENST00000538235 KAZALD1Q96I82 304 aa16.66■□□□□ 0.26
CHFR-216ENST00000538235 DICER1Q9UPY3 1922 aaKnown RBP16.66■□□□□ 0.26
CHFR-216ENST00000538235 KIF16BQ96L93 1317 aa16.66■□□□□ 0.26
CHFR-216ENST00000538235 CDHR2Q9BYE9 1310 aa16.66■□□□□ 0.26
CHFR-216ENST00000538235 IRS4O14654 1257 aaPredicted RBP16.65■□□□□ 0.26
CHFR-216ENST00000538235 PRELPP51888 382 aa16.65■□□□□ 0.26
CHFR-216ENST00000538235 COL4A5P29400 1685 aa16.65■□□□□ 0.26
CHFR-216ENST00000538235 NPHP1O15259 732 aa16.64■□□□□ 0.25
CHFR-216ENST00000538235 NBPF7P0C2Y1 421 aaPredicted RBP16.64■□□□□ 0.25
CHFR-216ENST00000538235 PDE6BP35913 854 aa16.64■□□□□ 0.25
CHFR-216ENST00000538235 FRAT1Q92837 279 aaPredicted RBP16.64■□□□□ 0.25
CHFR-216ENST00000538235 H0YIN7 160 aa16.63■□□□□ 0.25
CHFR-216ENST00000538235 PLIN1O60240 522 aa16.63■□□□□ 0.25
CHFR-216ENST00000538235 GTF2E1P29083 439 aaPredicted RBP16.63■□□□□ 0.25
CHFR-216ENST00000538235 NEXNQ0ZGT2 675 aa16.63■□□□□ 0.25
CHFR-216ENST00000538235 STYK1Q6J9G0 422 aa16.63■□□□□ 0.25
CHFR-216ENST00000538235 PRPF40BQ6NWY9 871 aaKnown RBP16.63■□□□□ 0.25
CHFR-216ENST00000538235 PELP1Q8IZL8 1130 aaKnown RBP16.63■□□□□ 0.25
CHFR-216ENST00000538235 ZNF622Q969S3 477 aaKnown RBP eCLIP16.63■□□□□ 0.25
CHFR-216ENST00000538235 CLUAP1Q96AJ1 413 aa16.63■□□□□ 0.25
CHFR-216ENST00000538235 CCDC85AQ96PX6 553 aaPredicted RBP16.63■□□□□ 0.25
CHFR-216ENST00000538235 SRCIN1Q9C0H9 1055 aa16.63■□□□□ 0.25
CHFR-216ENST00000538235 RCAN3Q9UKA8 241 aa16.63■□□□□ 0.25
CHFR-216ENST00000538235 BCS1LQ9Y276 419 aa16.63■□□□□ 0.25
CHFR-216ENST00000538235 UTYO14607 1347 aa16.63■□□□□ 0.25
CHFR-216ENST00000538235 GRM8O00222 908 aa16.62■□□□□ 0.25
CHFR-216ENST00000538235 ALDH1L1O75891 902 aa16.62■□□□□ 0.25
CHFR-216ENST00000538235 HOXA10P31260 410 aaPredicted RBP16.62■□□□□ 0.25
CHFR-216ENST00000538235 FOXO4P98177 505 aa16.62■□□□□ 0.25
CHFR-216ENST00000538235 ATF7IPQ6VMQ6 1270 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms