RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 IDEP14735 1019 aa12.95□□□□□ -0.34
LINC00346-201ENST00000538077 CYP7A1P22680 504 aa12.95□□□□□ -0.34
LINC00346-201ENST00000538077 METAP2P50579 478 aaKnown RBP eCLIP12.95□□□□□ -0.34
LINC00346-201ENST00000538077 USP16Q9Y5T5 823 aa12.95□□□□□ -0.34
LINC00346-201ENST00000538077 ZRANB1Q9UGI0 708 aa12.95□□□□□ -0.34
LINC00346-201ENST00000538077 TERF1P54274 439 aa12.95□□□□□ -0.34
LINC00346-201ENST00000538077 HSPA2P54652 639 aa12.95□□□□□ -0.34
LINC00346-201ENST00000538077 CALML4Q96GE6 196 aa12.95□□□□□ -0.34
LINC00346-201ENST00000538077 STX8Q9UNK0 236 aa12.95□□□□□ -0.34
LINC00346-201ENST00000538077 DENND4BO75064 1496 aaPredicted RBP12.95□□□□□ -0.34
LINC00346-201ENST00000538077 DISP3Q9P2K9 1392 aa12.95□□□□□ -0.34
LINC00346-201ENST00000538077 HEATR3Q7Z4Q2 680 aa12.95□□□□□ -0.34
LINC00346-201ENST00000538077 PRC1O43663 620 aa12.95□□□□□ -0.34
LINC00346-201ENST00000538077 TRIM27P14373 513 aa12.95□□□□□ -0.34
LINC00346-201ENST00000538077 RAB34Q9BZG1 259 aa12.95□□□□□ -0.34
LINC00346-201ENST00000538077 XAGE3Q8WTP9 111 aa12.94□□□□□ -0.34
LINC00346-201ENST00000538077 CRNKL1Q9BZJ0 848 aaKnown RBP12.94□□□□□ -0.34
LINC00346-201ENST00000538077 KIAA0754O94854 1291 aa12.94□□□□□ -0.34
LINC00346-201ENST00000538077 MTIF2P46199 727 aaKnown RBP12.94□□□□□ -0.34
LINC00346-201ENST00000538077 CCDC40Q4G0X9 1142 aa12.94□□□□□ -0.34
LINC00346-201ENST00000538077 ZNF354CQ86Y25 554 aa12.94□□□□□ -0.34
LINC00346-201ENST00000538077 FSIP1Q8NA03 581 aa12.94□□□□□ -0.34
LINC00346-201ENST00000538077 ADAMTS12P58397 1594 aa12.94□□□□□ -0.34
LINC00346-201ENST00000538077 CTNNA2P26232 953 aa12.94□□□□□ -0.34
LINC00346-201ENST00000538077 SSFA2P28290 1259 aa12.94□□□□□ -0.34
LINC00346-201ENST00000538077 ERLIN1O75477 346 aa12.94□□□□□ -0.34
LINC00346-201ENST00000538077 COMMD10Q9Y6G5 202 aa12.94□□□□□ -0.34
LINC00346-201ENST00000538077 TNRQ92752 1358 aa12.94□□□□□ -0.34
LINC00346-201ENST00000538077 ERICH4A6NGS2 130 aa12.93□□□□□ -0.34
LINC00346-201ENST00000538077 HMGB2P26583 209 aaKnown RBP12.93□□□□□ -0.34
LINC00346-201ENST00000538077 HMGB1P09429 215 aaKnown RBP12.93□□□□□ -0.34
LINC00346-201ENST00000538077 DPH6Q7L8W6 267 aa12.93□□□□□ -0.34
LINC00346-201ENST00000538077 SIRT1Q96EB6 747 aa12.93□□□□□ -0.34
LINC00346-201ENST00000538077 TEX13AQ9BXU3 409 aaPredicted RBP12.93□□□□□ -0.34
LINC00346-201ENST00000538077 RAPGEF6Q8TEU7 1601 aa12.93□□□□□ -0.34
LINC00346-201ENST00000538077 IL27Q8NEV9 243 aa12.93□□□□□ -0.34
LINC00346-201ENST00000538077 GSTO1P78417 241 aa12.93□□□□□ -0.34
LINC00346-201ENST00000538077 ANKRD13DQ6ZTN6 518 aa12.93□□□□□ -0.34
LINC00346-201ENST00000538077 PHAXQ9H814 394 aaKnown RBP12.93□□□□□ -0.34
LINC00346-201ENST00000538077 TRMT1Q9NXH9 659 aaKnown RBP12.93□□□□□ -0.34
LINC00346-201ENST00000538077 TOP1P11387 765 aaKnown RBP12.93□□□□□ -0.34
LINC00346-201ENST00000538077 ZBTB21Q9ULJ3 1066 aa12.93□□□□□ -0.34
LINC00346-201ENST00000538077 PPIP5K1Q6PFW1 1433 aa12.93□□□□□ -0.34
LINC00346-201ENST00000538077 SBNO2Q9Y2G9 1366 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 EZRP15311 586 aaKnown RBP12.92□□□□□ -0.34
LINC00346-201ENST00000538077 PRPF4BQ13523 1007 aaKnown RBP12.92□□□□□ -0.34
LINC00346-201ENST00000538077 DYDC1Q8WWB3 177 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 PARP3Q9Y6F1 533 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 PTPRCP08575 1304 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 IARSP41252 1262 aaKnown RBP12.92□□□□□ -0.34
LINC00346-201ENST00000538077 HDAC9Q9UKV0 1011 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 GSTTP1A0A1W2PQM5 241 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 DDB1Q16531 1140 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 GJA3Q9Y6H8 435 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 TTC21BQ7Z4L5 1316 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 TOM1O60784 492 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 CALM1P0DP23 149 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 CALM2P0DP24 149 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 CALM3P0DP25 149 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 KIF5BP33176 963 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 AKNAD1Q5T1N1 836 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 RGS22Q8NE09 1264 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 HELBQ8NG08 1087 aaPredicted RBP12.92□□□□□ -0.34
LINC00346-201ENST00000538077 KIF20AO95235 890 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 LDHCP07864 332 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 HSP90AA4PQ58FG1 418 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 IFIT1BQ5T764 474 aaKnown RBP12.92□□□□□ -0.34
LINC00346-201ENST00000538077 COPS6Q7L5N1 327 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 CLIP2Q9UDT6 1046 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 PIK3R4Q99570 1358 aa12.92□□□□□ -0.34
LINC00346-201ENST00000538077 CETN2P41208 172 aa12.91□□□□□ -0.34
LINC00346-201ENST00000538077 UBE4AQ14139 1066 aa12.91□□□□□ -0.34
LINC00346-201ENST00000538077 NECAB1Q8N987 351 aa12.91□□□□□ -0.34
LINC00346-201ENST00000538077 FAM212AQ96EL1 285 aa12.91□□□□□ -0.34
LINC00346-201ENST00000538077 TMCO5BA8MYB1 307 aa12.91□□□□□ -0.34
LINC00346-201ENST00000538077 NCOA7Q8NI08 942 aa12.91□□□□□ -0.34
LINC00346-201ENST00000538077 ANO10Q9NW15 660 aa12.91□□□□□ -0.34
LINC00346-201ENST00000538077 CADPS2Q86UW7 1296 aa12.91□□□□□ -0.34
LINC00346-201ENST00000538077 MIGA1Q8NAN2 632 aa12.91□□□□□ -0.34
LINC00346-201ENST00000538077 THOC2Q8NI27 1593 aaKnown RBP12.91□□□□□ -0.34
LINC00346-201ENST00000538077 MCM4P33991 863 aa12.91□□□□□ -0.34
LINC00346-201ENST00000538077 UTP14AQ9BVJ6 771 aaKnown RBP12.91□□□□□ -0.34
LINC00346-201ENST00000538077 ECHDC1Q9NTX5 307 aa12.91□□□□□ -0.34
LINC00346-201ENST00000538077 TCP11L1Q9NUJ3 509 aa12.91□□□□□ -0.34
LINC00346-201ENST00000538077 LIMCH1Q9UPQ0 1083 aa12.91□□□□□ -0.34
LINC00346-201ENST00000538077 AFMP43652 599 aa12.9□□□□□ -0.34
LINC00346-201ENST00000538077 CCDC183Q5T5S1 534 aa12.9□□□□□ -0.34
LINC00346-201ENST00000538077 DZIP3Q86Y13 1208 aaKnown RBP12.9□□□□□ -0.34
LINC00346-201ENST00000538077 TCEANC2Q96MN5 208 aa12.9□□□□□ -0.34
LINC00346-201ENST00000538077 NEK1Q96PY6 1258 aa12.9□□□□□ -0.34
LINC00346-201ENST00000538077 EIF3JO75822 258 aaKnown RBP12.9□□□□□ -0.34
LINC00346-201ENST00000538077 RBM27Q9P2N5 1060 aaKnown RBP12.9□□□□□ -0.34
LINC00346-201ENST00000538077 SP4Q02446 784 aa12.9□□□□□ -0.34
LINC00346-201ENST00000538077 LUZP1Q86V48 1076 aa12.9□□□□□ -0.34
LINC00346-201ENST00000538077 PA2G4Q9UQ80 394 aaKnown RBP12.9□□□□□ -0.34
LINC00346-201ENST00000538077 CCDC12Q8WUD4 166 aaPredicted RBP12.9□□□□□ -0.34
LINC00346-201ENST00000538077 ZNF408Q9H9D4 720 aa12.9□□□□□ -0.34
LINC00346-201ENST00000538077 SAP30BPQ9UHR5 308 aaKnown RBP12.9□□□□□ -0.34
LINC00346-201ENST00000538077 WTAPQ15007 396 aa12.89□□□□□ -0.35
LINC00346-201ENST00000538077 TBC1D9Q6ZT07 1266 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms