RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 HSP90AB3PQ58FF7 597 aa19.42■□□□□ 0.7
LRRK1-211ENST00000538064 HDGFL1Q5TGJ6 251 aa19.42■□□□□ 0.7
LRRK1-211ENST00000538064 COPS6Q7L5N1 327 aa19.42■□□□□ 0.7
LRRK1-211ENST00000538064 XAGE3Q8WTP9 111 aa19.42■□□□□ 0.7
LRRK1-211ENST00000538064 MBIPQ9NS73 344 aa19.42■□□□□ 0.7
LRRK1-211ENST00000538064 IFT57Q9NWB7 429 aa19.42■□□□□ 0.7
LRRK1-211ENST00000538064 CHPF2Q9P2E5 772 aa19.42■□□□□ 0.7
LRRK1-211ENST00000538064 SCN4AP35499 1836 aa19.41■□□□□ 0.7
LRRK1-211ENST00000538064 HOXA10P31260 410 aaPredicted RBP19.41■□□□□ 0.7
LRRK1-211ENST00000538064 FKBP4Q02790 459 aaKnown RBP eCLIP19.41■□□□□ 0.7
LRRK1-211ENST00000538064 FSTL1Q12841 308 aa19.41■□□□□ 0.7
LRRK1-211ENST00000538064 APLP1P51693 650 aa19.4■□□□□ 0.7
LRRK1-211ENST00000538064 AIMP1Q12904 312 aaKnown RBP19.4■□□□□ 0.7
LRRK1-211ENST00000538064 RTKN2Q8IZC4 609 aa19.4■□□□□ 0.7
LRRK1-211ENST00000538064 RPGRQ92834 1020 aaKnown RBP19.4■□□□□ 0.7
LRRK1-211ENST00000538064 UTP14AQ9BVJ6 771 aaKnown RBP19.4■□□□□ 0.7
LRRK1-211ENST00000538064 VEGFAP15692 232 aaPredicted RBP19.39■□□□□ 0.69
LRRK1-211ENST00000538064 DPY19L2Q6NUT2 758 aa19.39■□□□□ 0.69
LRRK1-211ENST00000538064 OLFM4Q6UX06 510 aa19.39■□□□□ 0.69
LRRK1-211ENST00000538064 DBF4Q9UBU7 674 aaPredicted RBP19.39■□□□□ 0.69
LRRK1-211ENST00000538064 GNAI1P63096 354 aa19.38■□□□□ 0.69
LRRK1-211ENST00000538064 CCDC184Q52MB2 194 aa19.38■□□□□ 0.69
LRRK1-211ENST00000538064 DUSP27Q5VZP5 1158 aa19.38■□□□□ 0.69
LRRK1-211ENST00000538064 NLRP10Q86W26 655 aa19.38■□□□□ 0.69
LRRK1-211ENST00000538064 CC2D2BQ6DHV5 1058 aa19.37■□□□□ 0.69
LRRK1-211ENST00000538064 C3orf67Q6ZVT6 689 aa19.37■□□□□ 0.69
LRRK1-211ENST00000538064 SMC1BQ8NDV3 1235 aa19.37■□□□□ 0.69
LRRK1-211ENST00000538064 RBM17Q96I25 401 aaKnown RBP19.37■□□□□ 0.69
LRRK1-211ENST00000538064 CRAMP1Q96RY5 1269 aa19.37■□□□□ 0.69
LRRK1-211ENST00000538064 TCIRG1Q13488 830 aa19.36■□□□□ 0.69
LRRK1-211ENST00000538064 SLC10A5Q5PT55 438 aa19.36■□□□□ 0.69
LRRK1-211ENST00000538064 PLBD2Q8NHP8 589 aa19.36■□□□□ 0.69
LRRK1-211ENST00000538064 NLRP3Q96P20 1036 aa19.36■□□□□ 0.69
LRRK1-211ENST00000538064 PSMD1Q99460 953 aa19.36■□□□□ 0.69
LRRK1-211ENST00000538064 ZNF277Q9NRM2 450 aaPredicted RBP19.36■□□□□ 0.69
LRRK1-211ENST00000538064 HYPKQ9NX55 129 aa19.36■□□□□ 0.69
LRRK1-211ENST00000538064 LRRC37AA6NMS7 1700 aa19.36■□□□□ 0.69
LRRK1-211ENST00000538064 POTECB2RU33 542 aa19.35■□□□□ 0.69
LRRK1-211ENST00000538064 TAF1P21675 1872 aa19.35■□□□□ 0.69
LRRK1-211ENST00000538064 PPEF1O14829 653 aaPredicted RBP19.34■□□□□ 0.69
LRRK1-211ENST00000538064 IARSP41252 1262 aaKnown RBP19.34■□□□□ 0.69
LRRK1-211ENST00000538064 GRIPAP1Q4V328 841 aa19.34■□□□□ 0.69
LRRK1-211ENST00000538064 COL4A5P29400 1685 aa19.33■□□□□ 0.69
LRRK1-211ENST00000538064 ABCC4O15439 1325 aa19.33■□□□□ 0.69
LRRK1-211ENST00000538064 SH3TC1Q8TE82 1336 aa19.33■□□□□ 0.69
LRRK1-211ENST00000538064 ANKRD13DQ6ZTN6 518 aa19.33■□□□□ 0.68
LRRK1-211ENST00000538064 SYNE4Q8N205 404 aa19.33■□□□□ 0.68
LRRK1-211ENST00000538064 ZNF541Q9H0D2 1346 aa19.32■□□□□ 0.68
LRRK1-211ENST00000538064 ANP32CO43423 234 aa19.32■□□□□ 0.68
LRRK1-211ENST00000538064 DDNO94850 711 aaPredicted RBP19.32■□□□□ 0.68
LRRK1-211ENST00000538064 CCDC27Q2M243 656 aa19.32■□□□□ 0.68
LRRK1-211ENST00000538064 L3MBTL3Q96JM7 780 aaPredicted RBP19.32■□□□□ 0.68
LRRK1-211ENST00000538064 ISCA1Q9BUE6 129 aa19.32■□□□□ 0.68
LRRK1-211ENST00000538064 TRMT112Q9UI30 125 aaKnown RBP19.32■□□□□ 0.68
LRRK1-211ENST00000538064 ADAMTSL1Q8N6G6 1762 aa19.32■□□□□ 0.68
LRRK1-211ENST00000538064 MRS2Q9HD23 443 aa19.31■□□□□ 0.68
LRRK1-211ENST00000538064 CACNA1FO60840 1977 aa19.3■□□□□ 0.68
LRRK1-211ENST00000538064 SLC51AQ86UW1 340 aa19.3■□□□□ 0.68
LRRK1-211ENST00000538064 IQCA1LA6NCM1 817 aa19.29■□□□□ 0.68
LRRK1-211ENST00000538064 FZD9O00144 591 aa19.29■□□□□ 0.68
LRRK1-211ENST00000538064 HCLS1P14317 486 aaPredicted RBP19.29■□□□□ 0.68
LRRK1-211ENST00000538064 GOLGA2Q08379 1002 aa19.29■□□□□ 0.68
LRRK1-211ENST00000538064 NCBP3Q53F19 620 aaKnown RBP19.29■□□□□ 0.68
LRRK1-211ENST00000538064 C8orf58Q8NAV2 365 aa19.29■□□□□ 0.68
LRRK1-211ENST00000538064 ATP6V0A2Q9Y487 856 aa19.29■□□□□ 0.68
LRRK1-211ENST00000538064 ELL2O00472 640 aaPredicted RBP19.28■□□□□ 0.68
LRRK1-211ENST00000538064 CHMP4AQ9BY43 222 aa19.28■□□□□ 0.68
LRRK1-211ENST00000538064 DUOX1Q9NRD9 1551 aa19.27■□□□□ 0.68
LRRK1-211ENST00000538064 TRIM28Q13263 835 aaKnown RBP19.27■□□□□ 0.68
LRRK1-211ENST00000538064 WWC1Q8IX03 1113 aa19.27■□□□□ 0.68
LRRK1-211ENST00000538064 DNAJC5GQ8N7S2 189 aa19.27■□□□□ 0.68
LRRK1-211ENST00000538064 JDP2Q8WYK2 163 aa19.27■□□□□ 0.68
LRRK1-211ENST00000538064 TMX4Q9H1E5 349 aaPredicted RBP19.27■□□□□ 0.68
LRRK1-211ENST00000538064 LTBP1Q14766 1721 aa19.27■□□□□ 0.68
LRRK1-211ENST00000538064 IL16Q14005 1332 aa19.26■□□□□ 0.67
LRRK1-211ENST00000538064 MYH3P11055 1940 aa19.26■□□□□ 0.67
LRRK1-211ENST00000538064 ATP5J2-PTCD1G3V325 749 aa19.26■□□□□ 0.67
LRRK1-211ENST00000538064 TCERG1O14776 1098 aaKnown RBP19.26■□□□□ 0.67
LRRK1-211ENST00000538064 GRAPQ13588 217 aa19.26■□□□□ 0.67
LRRK1-211ENST00000538064 CCDC30Q5VVM6 783 aa19.26■□□□□ 0.67
LRRK1-211ENST00000538064 DDX46Q7L014 1031 aaKnown RBP19.26■□□□□ 0.67
LRRK1-211ENST00000538064 GRAPLQ8TC17 118 aaPredicted RBP19.26■□□□□ 0.67
LRRK1-211ENST00000538064 PHAXQ9H814 394 aaKnown RBP19.26■□□□□ 0.67
LRRK1-211ENST00000538064 COL4A1P02462 1669 aa19.26■□□□□ 0.67
LRRK1-211ENST00000538064 BBOX1O75936 387 aa19.25■□□□□ 0.67
LRRK1-211ENST00000538064 HTRA3P83110 453 aa19.25■□□□□ 0.67
LRRK1-211ENST00000538064 CHADLQ6NUI6 762 aa19.25■□□□□ 0.67
LRRK1-211ENST00000538064 RIC3Q7Z5B4 369 aa19.25■□□□□ 0.67
LRRK1-211ENST00000538064 GPC2Q8N158 579 aa19.25■□□□□ 0.67
LRRK1-211ENST00000538064 LARGE2Q8N3Y3 721 aa19.25■□□□□ 0.67
LRRK1-211ENST00000538064 TSR2Q969E8 191 aaKnown RBP19.25■□□□□ 0.67
LRRK1-211ENST00000538064 FAM89AQ96GI7 184 aa19.25■□□□□ 0.67
LRRK1-211ENST00000538064 TAF1DQ9H5J8 278 aaPredicted RBP19.25■□□□□ 0.67
LRRK1-211ENST00000538064 SP8Q8IXZ3 490 aa19.24■□□□□ 0.67
LRRK1-211ENST00000538064 TSPYL6Q8N831 410 aa19.24■□□□□ 0.67
LRRK1-211ENST00000538064 RTFDC1Q9BY42 306 aaPredicted RBP19.24■□□□□ 0.67
LRRK1-211ENST00000538064 POTEIP0CG38 1075 aa19.23■□□□□ 0.67
LRRK1-211ENST00000538064 POTEJP0CG39 1038 aa19.23■□□□□ 0.67
LRRK1-211ENST00000538064 EIF6P56537 245 aaKnown RBP19.23■□□□□ 0.67
LRRK1-211ENST00000538064 TMC4Q7Z404 712 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms