RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 CCDC38Q502W7 563 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 DZIP1Q86YF9 867 aaKnown RBP6.48□□□□□ -1.37
CSMD1-215ENST00000537824 CEP120Q8N960 986 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 CAPN7Q9Y6W3 813 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 ERICH3Q5RHP9 1530 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 CIB2O75838 187 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 PAF1Q8N7H5 531 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 SMIM23A6NLE4 172 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 VGFO15240 615 aaPredicted RBP6.48□□□□□ -1.37
CSMD1-215ENST00000537824 FGFR1OPO95684 399 aaKnown RBP6.48□□□□□ -1.37
CSMD1-215ENST00000537824 SYT10Q6XYQ8 523 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 ZNF622Q969S3 477 aaKnown RBP eCLIP6.48□□□□□ -1.376e-7■■□□□ 11.7
CSMD1-215ENST00000537824 ANKRD18BA2A2Z9 1011 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 LARP1Q6PKG0 1096 aaKnown RBP6.48□□□□□ -1.37
CSMD1-215ENST00000537824 PNMA8AQ86V59 439 aaPredicted RBP6.48□□□□□ -1.37
CSMD1-215ENST00000537824 VEZTQ9HBM0 779 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 SAMD15Q9P1V8 674 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 PPARDQ03181 441 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 DNAJC25Q9H1X3 360 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 RAB3GAP1Q15042 981 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 DIXDC1Q155Q3 683 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 UTP14CQ5TAP6 766 aaKnown RBP6.48□□□□□ -1.37
CSMD1-215ENST00000537824 DDX27Q96GQ7 796 aaKnown RBP6.48□□□□□ -1.37
CSMD1-215ENST00000537824 MYO1BO43795 1136 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 MTHFSP49914 203 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 SLFN5Q08AF3 891 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 DDX46Q7L014 1031 aaKnown RBP6.48□□□□□ -1.37
CSMD1-215ENST00000537824 ZNF428Q96B54 188 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 INTS8Q75QN2 995 aaKnown RBP6.47□□□□□ -1.37
CSMD1-215ENST00000537824 LZTFL1Q9NQ48 299 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 CEP131Q9UPN4 1083 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 TOP2AP11388 1531 aaKnown RBP6.47□□□□□ -1.37
CSMD1-215ENST00000537824 RRBP1Q9P2E9 1410 aaKnown RBP6.47□□□□□ -1.37
CSMD1-215ENST00000537824 CCDC172P0C7W6 258 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 RPUSD2Q8IZ73 545 aaKnown RBP6.47□□□□□ -1.37
CSMD1-215ENST00000537824 CETN3O15182 167 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 HSP90AA4PQ58FG1 418 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 TRIM68Q6AZZ1 485 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 TTC5Q8N0Z6 440 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 STMN2Q93045 179 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 USH1CQ9Y6N9 552 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 SEC62Q99442 399 aaKnown RBP6.47□□□□□ -1.37
CSMD1-215ENST00000537824 TACO1Q9BSH4 297 aaKnown RBP6.47□□□□□ -1.37
CSMD1-215ENST00000537824 STMN4Q9H169 189 aaPredicted RBP6.47□□□□□ -1.37
CSMD1-215ENST00000537824 N4BP3O15049 544 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 RAB11FIP3O75154 756 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 MORC4Q8TE76 937 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 FGD6Q6ZV73 1430 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 TUBB4BP68371 445 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 IFNKQ9P0W0 207 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.47□□□□□ -1.37
CSMD1-215ENST00000537824 CHMP4BP1P59074 171 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 CACNA2D3Q8IZS8 1091 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 PIK3R5Q8WYR1 880 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 HOMER2Q9NSB8 354 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 LRPPRCP42704 1394 aaKnown RBP6.47□□□□□ -1.37
CSMD1-215ENST00000537824 TWISTNBQ3B726 338 aaPredicted RBP6.47□□□□□ -1.37
CSMD1-215ENST00000537824 CNPY4Q8N129 248 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 TSG101Q99816 390 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 BMP2KQ9NSY1 1161 aaPredicted RBP6.47□□□□□ -1.37
CSMD1-215ENST00000537824 CECR2Q9BXF3 1484 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 BRWD1Q9NSI6 2320 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 RTTNQ86VV8 2226 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 ANAPC4Q9UJX5 808 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 TTC39AQ5SRH9 613 aa6.47□□□□□ -1.37
CSMD1-215ENST00000537824 SPTY2D1Q68D10 685 aaPredicted RBP6.47□□□□□ -1.37
CSMD1-215ENST00000537824 ERBINQ96RT1 1412 aa6.46□□□□□ -1.37
CSMD1-215ENST00000537824 GOLGA8BA8MQT2 603 aa6.46□□□□□ -1.37
CSMD1-215ENST00000537824 TUBB4AP04350 444 aa6.46□□□□□ -1.37
CSMD1-215ENST00000537824 ARHGAP25P42331 645 aa6.46□□□□□ -1.37
CSMD1-215ENST00000537824 DBN1Q16643 649 aa6.46□□□□□ -1.37
CSMD1-215ENST00000537824 CCDC158Q5M9N0 1113 aa6.46□□□□□ -1.37
CSMD1-215ENST00000537824 SPATS2LQ9NUQ6 558 aaKnown RBP6.46□□□□□ -1.37
CSMD1-215ENST00000537824 GJB2P29033 226 aa6.46□□□□□ -1.37
CSMD1-215ENST00000537824 LMOD1P29536 600 aaPredicted RBP6.46□□□□□ -1.37
CSMD1-215ENST00000537824 CCT2P78371 535 aaKnown RBP6.46□□□□□ -1.37
CSMD1-215ENST00000537824 RRP15Q9Y3B9 282 aaKnown RBP6.46□□□□□ -1.37
CSMD1-215ENST00000537824 IKBKGQ9Y6K9 419 aa6.46□□□□□ -1.37
CSMD1-215ENST00000537824 AKR1B10O60218 316 aa6.46□□□□□ -1.37
CSMD1-215ENST00000537824 IKQ13123 557 aaPredicted RBP6.46□□□□□ -1.37
CSMD1-215ENST00000537824 MRFAP1L1Q96HT8 127 aa6.46□□□□□ -1.37
CSMD1-215ENST00000537824 TTC14Q96N46 770 aa6.46□□□□□ -1.37
CSMD1-215ENST00000537824 RASAL2Q9UJF2 1139 aa6.46□□□□□ -1.37
CSMD1-215ENST00000537824 CACNA1FO60840 1977 aa6.46□□□□□ -1.37
CSMD1-215ENST00000537824 GOLGA6CA6NDK9 693 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 GOLGA6DP0CG33 693 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 ZC3H6P61129 1189 aaKnown RBP6.46□□□□□ -1.38
CSMD1-215ENST00000537824 NUTM1Q86Y26 1132 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 WASF1Q92558 559 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 GOLGA6AQ9NYA3 693 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 E2F4Q16254 413 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 CNNM3Q8NE01 707 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 ZSCAN22P10073 491 aaPredicted RBP6.46□□□□□ -1.38
CSMD1-215ENST00000537824 HNRNPMP52272 730 aaKnown RBP eCLIP6.46□□□□□ -1.38
CSMD1-215ENST00000537824 ZNF569Q5MCW4 686 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 CCDC30Q5VVM6 783 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 SSH1Q8WYL5 1049 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 DDX23Q9BUQ8 820 aaKnown RBP6.46□□□□□ -1.38
CSMD1-215ENST00000537824 PFDN1O60925 122 aa6.46□□□□□ -1.38
CSMD1-215ENST00000537824 MAP3K9P80192 1104 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms