RNA–Protein interactions for RNA: ENST00000537488.1

ATN1-203, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 899 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-203ENST00000537488 IBTKQ9P2D0 1353 aaPredicted RBP21.29■■□□□ 1
ATN1-203ENST00000537488 CRY2Q49AN0 593 aa21.29■■□□□ 1
ATN1-203ENST00000537488 NLRP10Q86W26 655 aa21.29■■□□□ 1
ATN1-203ENST00000537488 WWC1Q8IX03 1113 aa21.29■■□□□ 1
ATN1-203ENST00000537488 PHAXQ9H814 394 aaKnown RBP21.29■■□□□ 1
ATN1-203ENST00000537488 TCIRG1Q13488 830 aa21.28■■□□□ 1
ATN1-203ENST00000537488 PARP10Q53GL7 1025 aa21.28■■□□□ 1
ATN1-203ENST00000537488 PPP1R42Q7Z4L9 355 aa21.28■■□□□ 1
ATN1-203ENST00000537488 UTP14AQ9BVJ6 771 aaKnown RBP21.28■■□□□ 1
ATN1-203ENST00000537488 DBF4Q9UBU7 674 aaPredicted RBP21.28■■□□□ 1
ATN1-203ENST00000537488 ATP5J2-PTCD1G3V325 749 aa21.27■■□□□ 1
ATN1-203ENST00000537488 TCERG1O14776 1098 aaKnown RBP21.27■■□□□ 1
ATN1-203ENST00000537488 CALD1Q05682 793 aaKnown RBP21.27■■□□□ 1
ATN1-203ENST00000537488 TAOK3Q9H2K8 898 aa21.27■■□□□ 1
ATN1-203ENST00000537488 HCLS1P14317 486 aaPredicted RBP21.26■□□□□ 0.99
ATN1-203ENST00000537488 ANKRD13DQ6ZTN6 518 aa21.26■□□□□ 0.99
ATN1-203ENST00000537488 FAM9BQ8IZU0 186 aa21.26■□□□□ 0.99
ATN1-203ENST00000537488 PLBD2Q8NHP8 589 aa21.26■□□□□ 0.99
ATN1-203ENST00000537488 RIC1Q4ADV7 1423 aa21.26■□□□□ 0.99
ATN1-203ENST00000537488 DDX60Q8IY21 1712 aaKnown RBP21.26■□□□□ 0.99
ATN1-203ENST00000537488 CCDC27Q2M243 656 aa21.25■□□□□ 0.99
ATN1-203ENST00000537488 CCDC93Q567U6 631 aa21.25■□□□□ 0.99
ATN1-203ENST00000537488 RPGRQ92834 1020 aaKnown RBP21.25■□□□□ 0.99
ATN1-203ENST00000537488 HYPKQ9NX55 129 aa21.25■□□□□ 0.99
ATN1-203ENST00000537488 LTBP3Q9NS15 1303 aa21.25■□□□□ 0.99
ATN1-203ENST00000537488 ALDH1B1P30837 517 aa21.24■□□□□ 0.99
ATN1-203ENST00000537488 HOXA10P31260 410 aaPredicted RBP21.24■□□□□ 0.99
ATN1-203ENST00000537488 HSP90AB3PQ58FF7 597 aa21.24■□□□□ 0.99
ATN1-203ENST00000537488 SLC10A5Q5PT55 438 aa21.24■□□□□ 0.99
ATN1-203ENST00000537488 ZNF277Q9NRM2 450 aaPredicted RBP21.24■□□□□ 0.99
ATN1-203ENST00000537488 TRMT112Q9UI30 125 aaKnown RBP21.24■□□□□ 0.99
ATN1-203ENST00000537488 KDM2BQ8NHM5 1336 aa21.24■□□□□ 0.99
ATN1-203ENST00000537488 SNED1Q8TER0 1413 aa21.23■□□□□ 0.99
ATN1-203ENST00000537488 GLTPD2A6NH11 291 aa21.23■□□□□ 0.99
ATN1-203ENST00000537488 ISCA1Q9BUE6 129 aa21.23■□□□□ 0.99
ATN1-203ENST00000537488 RTL5Q5HYW3 569 aaPredicted RBP21.22■□□□□ 0.99
ATN1-203ENST00000537488 SOGA3Q5TF21 947 aa21.22■□□□□ 0.99
ATN1-203ENST00000537488 NLRP3Q96P20 1036 aa21.22■□□□□ 0.99
ATN1-203ENST00000537488 POTECB2RU33 542 aa21.21■□□□□ 0.99
ATN1-203ENST00000537488 TOMM70O94826 608 aa21.21■□□□□ 0.99
ATN1-203ENST00000537488 FKBP4Q02790 459 aaKnown RBP eCLIP21.21■□□□□ 0.99
ATN1-203ENST00000537488 RBM17Q96I25 401 aaKnown RBP21.21■□□□□ 0.99
ATN1-203ENST00000537488 SPINK5Q9NQ38 1064 aaPredicted RBP21.21■□□□□ 0.99
ATN1-203ENST00000537488 COL4A1P02462 1669 aa21.21■□□□□ 0.99
ATN1-203ENST00000537488 FAM89AQ96GI7 184 aa21.2■□□□□ 0.98
ATN1-203ENST00000537488 CRAMP1Q96RY5 1269 aa21.2■□□□□ 0.98
ATN1-203ENST00000537488 ZC3H4Q9UPT8 1303 aaKnown RBP21.2■□□□□ 0.98
ATN1-203ENST00000537488 COL4A5P29400 1685 aa21.19■□□□□ 0.98
ATN1-203ENST00000537488 WDR90Q96KV7 1748 aa21.19■□□□□ 0.98
ATN1-203ENST00000537488 DDNO94850 711 aaPredicted RBP21.19■□□□□ 0.98
ATN1-203ENST00000537488 RIC3Q7Z5B4 369 aa21.19■□□□□ 0.98
ATN1-203ENST00000537488 JARID2Q92833 1246 aaPredicted RBP21.19■□□□□ 0.98
ATN1-203ENST00000537488 ABCC4O15439 1325 aa21.19■□□□□ 0.98
ATN1-203ENST00000537488 SH3TC1Q8TE82 1336 aa21.19■□□□□ 0.98
ATN1-203ENST00000537488 PPEF1O14829 653 aaPredicted RBP21.18■□□□□ 0.98
ATN1-203ENST00000537488 HSPA6P17066 643 aa21.18■□□□□ 0.98
ATN1-203ENST00000537488 CCDC30Q5VVM6 783 aa21.18■□□□□ 0.98
ATN1-203ENST00000537488 G2E3Q7L622 706 aa21.18■□□□□ 0.98
ATN1-203ENST00000537488 MYD88Q99836 296 aa21.18■□□□□ 0.98
ATN1-203ENST00000537488 TWISTNBQ3B726 338 aaPredicted RBP21.17■□□□□ 0.98
ATN1-203ENST00000537488 RTKN2Q8IZC4 609 aa21.17■□□□□ 0.98
ATN1-203ENST00000537488 IL16Q14005 1332 aa21.17■□□□□ 0.98
ATN1-203ENST00000537488 FANCIQ9NVI1 1328 aa21.17■□□□□ 0.98
ATN1-203ENST00000537488 ZNF541Q9H0D2 1346 aa21.16■□□□□ 0.98
ATN1-203ENST00000537488 GOLGA2Q08379 1002 aa21.16■□□□□ 0.98
ATN1-203ENST00000537488 C16orf71Q8IYS4 520 aaPredicted RBP21.16■□□□□ 0.98
ATN1-203ENST00000537488 RNF123Q5XPI4 1314 aa21.15■□□□□ 0.98
ATN1-203ENST00000537488 IARSP41252 1262 aaKnown RBP21.15■□□□□ 0.98
ATN1-203ENST00000537488 RBM46Q8TBY0 533 aaKnown RBP21.15■□□□□ 0.98
ATN1-203ENST00000537488 VEGFAP15692 232 aaPredicted RBP21.14■□□□□ 0.97
ATN1-203ENST00000537488 DPY19L2Q6NUT2 758 aa21.14■□□□□ 0.97
ATN1-203ENST00000537488 EXOSC9Q06265 439 aaKnown RBP21.13■□□□□ 0.97
ATN1-203ENST00000537488 TRIM28Q13263 835 aaKnown RBP21.13■□□□□ 0.97
ATN1-203ENST00000537488 NCBP3Q53F19 620 aaKnown RBP21.13■□□□□ 0.97
ATN1-203ENST00000537488 WDR63Q8IWG1 891 aa21.13■□□□□ 0.97
ATN1-203ENST00000537488 PSMD1Q99460 953 aa21.13■□□□□ 0.97
ATN1-203ENST00000537488 MAP3K2Q9Y2U5 619 aa21.13■□□□□ 0.97
ATN1-203ENST00000537488 HTRA3P83110 453 aa21.12■□□□□ 0.97
ATN1-203ENST00000537488 METTL22Q9BUU2 404 aaPredicted RBP21.12■□□□□ 0.97
ATN1-203ENST00000537488 ATP6V0A2Q9Y487 856 aa21.12■□□□□ 0.97
ATN1-203ENST00000537488 PI4KAP2A4QPH2 592 aa21.11■□□□□ 0.97
ATN1-203ENST00000537488 IRS4O14654 1257 aaPredicted RBP21.11■□□□□ 0.97
ATN1-203ENST00000537488 VAMP4O75379 141 aa21.11■□□□□ 0.97
ATN1-203ENST00000537488 SLC4A2P04920 1241 aa21.11■□□□□ 0.97
ATN1-203ENST00000537488 POTEIP0CG38 1075 aa21.11■□□□□ 0.97
ATN1-203ENST00000537488 POTEJP0CG39 1038 aa21.11■□□□□ 0.97
ATN1-203ENST00000537488 CC2D2BQ6DHV5 1058 aa21.11■□□□□ 0.97
ATN1-203ENST00000537488 DDX46Q7L014 1031 aaKnown RBP21.11■□□□□ 0.97
ATN1-203ENST00000537488 PI4KAP1Q8N8J0 262 aa21.11■□□□□ 0.97
ATN1-203ENST00000537488 GRAPQ13588 217 aa21.1■□□□□ 0.97
ATN1-203ENST00000537488 GRAPLQ8TC17 118 aaPredicted RBP21.1■□□□□ 0.97
ATN1-203ENST00000537488 CELF1Q92879 486 aaKnown RBP21.1■□□□□ 0.97
ATN1-203ENST00000537488 CACNA1FO60840 1977 aa21.09■□□□□ 0.97
ATN1-203ENST00000537488 FZD9O00144 591 aa21.09■□□□□ 0.97
ATN1-203ENST00000537488 IGKV5-2P06315 115 aa21.09■□□□□ 0.97
ATN1-203ENST00000537488 KSR2Q6VAB6 950 aa21.09■□□□□ 0.97
ATN1-203ENST00000537488 STK31Q9BXU1 1019 aa21.09■□□□□ 0.97
ATN1-203ENST00000537488 CEP350Q5VT06 3117 aa21.09■□□□□ 0.97
ATN1-203ENST00000537488 LRRC37AA6NMS7 1700 aa21.08■□□□□ 0.97
ATN1-203ENST00000537488 BBOX1O75936 387 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 169.2 ms