RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 PIP4K2AP48426 406 aaPredicted RBP11.29□□□□□ -0.6
UBE3B-207ENST00000537063 TTC14Q96N46 770 aa11.29□□□□□ -0.6
UBE3B-207ENST00000537063 SNX14Q9Y5W7 946 aa11.29□□□□□ -0.6
UBE3B-207ENST00000537063 RUFY2Q8WXA3 655 aa11.28□□□□□ -0.6
UBE3B-207ENST00000537063 TLR7Q9NYK1 1049 aaKnown RBP11.28□□□□□ -0.6
UBE3B-207ENST00000537063 ISY1Q9ULR0 285 aaKnown RBP11.28□□□□□ -0.6
UBE3B-207ENST00000537063 CICQ96RK0 1608 aaPredicted RBP11.28□□□□□ -0.6
UBE3B-207ENST00000537063 L1TD1Q5T7N2 865 aaKnown RBP11.28□□□□□ -0.6
UBE3B-207ENST00000537063 SPEF2Q9C093 1822 aa11.28□□□□□ -0.6
UBE3B-207ENST00000537063 MED23Q9ULK4 1368 aa11.28□□□□□ -0.6
UBE3B-207ENST00000537063 HIP1O00291 1037 aa11.28□□□□□ -0.6
UBE3B-207ENST00000537063 FOXO4P98177 505 aa11.28□□□□□ -0.6
UBE3B-207ENST00000537063 PKP1Q13835 747 aa11.27□□□□□ -0.6
UBE3B-207ENST00000537063 UBE3BQ7Z3V4 1068 aa11.27□□□□□ -0.6
UBE3B-207ENST00000537063 CWC27Q6UX04 472 aaKnown RBP11.27□□□□□ -0.61
UBE3B-207ENST00000537063 DIAPH3Q9NSV4 1193 aa11.27□□□□□ -0.61
UBE3B-207ENST00000537063 A0A087WZG4 1122 aa11.26□□□□□ -0.61
UBE3B-207ENST00000537063 VSIG10Q8N0Z9 540 aa11.26□□□□□ -0.61
UBE3B-207ENST00000537063 KLHDC4Q8TBB5 520 aa11.26□□□□□ -0.61
UBE3B-207ENST00000537063 TTLL7Q6ZT98 887 aa11.26□□□□□ -0.61
UBE3B-207ENST00000537063 RASEFQ8IZ41 740 aa11.26□□□□□ -0.61
UBE3B-207ENST00000537063 CCDC171Q6TFL3 1326 aa11.26□□□□□ -0.61
UBE3B-207ENST00000537063 RREB1Q92766 1687 aa11.26□□□□□ -0.61
UBE3B-207ENST00000537063 ATP5J2-PTCD1G3V325 749 aa11.26□□□□□ -0.61
UBE3B-207ENST00000537063 PTCD1O75127 700 aaKnown RBP11.26□□□□□ -0.61
UBE3B-207ENST00000537063 ATP5JP18859 108 aa11.26□□□□□ -0.61
UBE3B-207ENST00000537063 TNNI3KQ59H18 835 aa11.26□□□□□ -0.61
UBE3B-207ENST00000537063 TM6SF1Q9BZW5 370 aa11.26□□□□□ -0.61
UBE3B-207ENST00000537063 SIL1Q9H173 461 aa11.26□□□□□ -0.61
UBE3B-207ENST00000537063 FPGT-TNNI3KV9GXZ4 949 aa11.26□□□□□ -0.61
UBE3B-207ENST00000537063 RPAP1Q9BWH6 1393 aaPredicted RBP11.25□□□□□ -0.61
UBE3B-207ENST00000537063 BRD1O95696 1058 aa11.25□□□□□ -0.61
UBE3B-207ENST00000537063 PTH1RQ03431 593 aa11.25□□□□□ -0.61
UBE3B-207ENST00000537063 KLHL40Q2TBA0 621 aa11.25□□□□□ -0.61
UBE3B-207ENST00000537063 CCDC191Q8NCU4 936 aa11.25□□□□□ -0.61
UBE3B-207ENST00000537063 CCDC8Q9H0W5 538 aaPredicted RBP11.25□□□□□ -0.61
UBE3B-207ENST00000537063 CWC25Q9NXE8 425 aaPredicted RBP11.25□□□□□ -0.61
UBE3B-207ENST00000537063 DOT1LQ8TEK3 1739 aa11.25□□□□□ -0.61
UBE3B-207ENST00000537063 GOLGA6L22H0YM25 854 aa11.25□□□□□ -0.61
UBE3B-207ENST00000537063 NECTIN1Q15223 517 aa11.25□□□□□ -0.61
UBE3B-207ENST00000537063 KIAA1211Q6ZU35 1233 aa11.25□□□□□ -0.61
UBE3B-207ENST00000537063 DBNLQ9UJU6 430 aaKnown RBP11.25□□□□□ -0.61
UBE3B-207ENST00000537063 BRPF3Q9ULD4 1205 aa11.25□□□□□ -0.61
UBE3B-207ENST00000537063 BCL9O00512 1426 aa11.25□□□□□ -0.61
UBE3B-207ENST00000537063 GOLGA6L3A6NEY3 463 aa11.24□□□□□ -0.61
UBE3B-207ENST00000537063 A1BGP04217 495 aa11.24□□□□□ -0.61
UBE3B-207ENST00000537063 ISCA1Q9BUE6 129 aa11.24□□□□□ -0.61
UBE3B-207ENST00000537063 UPF3BQ9BZI7 483 aaKnown RBP11.24□□□□□ -0.61
UBE3B-207ENST00000537063 GPR108Q9NPR9 543 aa11.24□□□□□ -0.61
UBE3B-207ENST00000537063 STRN4Q9NRL3 753 aa11.24□□□□□ -0.61
UBE3B-207ENST00000537063 LTBP4Q8N2S1 1624 aa11.24□□□□□ -0.61
UBE3B-207ENST00000537063 ZNF609O15014 1411 aa11.24□□□□□ -0.61
UBE3B-207ENST00000537063 MAP4K1Q92918 833 aa11.24□□□□□ -0.61
UBE3B-207ENST00000537063 ATG3Q9NT62 314 aa11.24□□□□□ -0.61
UBE3B-207ENST00000537063 LMBRD1Q9NUN5 540 aa11.24□□□□□ -0.61
UBE3B-207ENST00000537063 EVA1CP58658 441 aa11.24□□□□□ -0.61
UBE3B-207ENST00000537063 TFCP2Q12800 502 aa11.24□□□□□ -0.61
UBE3B-207ENST00000537063 NMIQ13287 307 aaPredicted RBP11.24□□□□□ -0.61
UBE3B-207ENST00000537063 TICAM2Q86XR7 235 aa11.24□□□□□ -0.61
UBE3B-207ENST00000537063 TRIM28Q13263 835 aaKnown RBP11.23□□□□□ -0.61
UBE3B-207ENST00000537063 ATG9AQ7Z3C6 839 aa11.23□□□□□ -0.61
UBE3B-207ENST00000537063 DDX54Q8TDD1 881 aaKnown RBP11.23□□□□□ -0.61
UBE3B-207ENST00000537063 TMOD3Q9NYL9 352 aa11.23□□□□□ -0.61
UBE3B-207ENST00000537063 ZSWIM6Q9HCJ5 1215 aa11.23□□□□□ -0.61
UBE3B-207ENST00000537063 MYH3P11055 1940 aa11.23□□□□□ -0.61
UBE3B-207ENST00000537063 PHLPP1O60346 1717 aa11.23□□□□□ -0.61
UBE3B-207ENST00000537063 LMBR1LQ6UX01 489 aa11.23□□□□□ -0.61
UBE3B-207ENST00000537063 JARID2Q92833 1246 aaPredicted RBP11.23□□□□□ -0.61
UBE3B-207ENST00000537063 FAM227BQ96M60 508 aa11.23□□□□□ -0.61
UBE3B-207ENST00000537063 TEX13AQ9BXU3 409 aaPredicted RBP11.23□□□□□ -0.61
UBE3B-207ENST00000537063 GZF1Q9H116 711 aaPredicted RBP11.23□□□□□ -0.61
UBE3B-207ENST00000537063 A0A0D9SFI3 127 aa11.22□□□□□ -0.61
UBE3B-207ENST00000537063 XRCC6P12956 609 aaKnown RBP eCLIP11.22□□□□□ -0.61
UBE3B-207ENST00000537063 PIGBQ92521 554 aa11.22□□□□□ -0.61
UBE3B-207ENST00000537063 CIAO1O76071 339 aa11.22□□□□□ -0.61
UBE3B-207ENST00000537063 VPS53Q5VIR6 699 aa11.22□□□□□ -0.61
UBE3B-207ENST00000537063 RUFY3Q7L099 469 aa11.22□□□□□ -0.61
UBE3B-207ENST00000537063 BTG4Q9NY30 223 aa11.22□□□□□ -0.61
UBE3B-207ENST00000537063 PALLDQ8WX93 1383 aa11.22□□□□□ -0.61
UBE3B-207ENST00000537063 LRP5O75197 1615 aa11.22□□□□□ -0.61
UBE3B-207ENST00000537063 AK2P54819 239 aa11.22□□□□□ -0.61
UBE3B-207ENST00000537063 HAUS7Q99871 368 aa11.22□□□□□ -0.61
UBE3B-207ENST00000537063 PLA2G12BQ9BX93 195 aa11.22□□□□□ -0.61
UBE3B-207ENST00000537063 BOLA2Q9H3K6 86 aa11.22□□□□□ -0.61
UBE3B-207ENST00000537063 NUP98P52948 1817 aa11.21□□□□□ -0.61
UBE3B-207ENST00000537063 MRE11P49959 708 aa11.21□□□□□ -0.61
UBE3B-207ENST00000537063 TSGA10IPQ3SY00 556 aa11.21□□□□□ -0.61
UBE3B-207ENST00000537063 USPL1Q5W0Q7 1092 aa11.21□□□□□ -0.61
UBE3B-207ENST00000537063 NWD2Q9ULI1 1742 aa11.21□□□□□ -0.61
UBE3B-207ENST00000537063 TCIRG1Q13488 830 aa11.21□□□□□ -0.61
UBE3B-207ENST00000537063 ALDH8A1Q9H2A2 487 aaPredicted RBP11.21□□□□□ -0.61
UBE3B-207ENST00000537063 LIMCH1Q9UPQ0 1083 aa11.21□□□□□ -0.61
UBE3B-207ENST00000537063 RBM8AQ9Y5S9 174 aaKnown RBP11.21□□□□□ -0.61
UBE3B-207ENST00000537063 CREB3L3Q68CJ9 461 aa11.21□□□□□ -0.62
UBE3B-207ENST00000537063 MCTP1Q6DN14 999 aa11.21□□□□□ -0.62
UBE3B-207ENST00000537063 FSD1Q9BTV5 496 aa11.21□□□□□ -0.62
UBE3B-207ENST00000537063 PRPF40BQ6NWY9 871 aaKnown RBP11.2□□□□□ -0.62
UBE3B-207ENST00000537063 IL15P40933 162 aaPredicted RBP11.2□□□□□ -0.62
UBE3B-207ENST00000537063 ADCK5Q3MIX3 580 aa11.2□□□□□ -0.62
UBE3B-207ENST00000537063 DBNDD2Q9BQY9 259 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms