RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 C3orf67Q6ZVT6 689 aa23.36■■□□□ 1.33
LTBR-206ENST00000536876 CNTROBQ8N137 903 aa23.36■■□□□ 1.33
LTBR-206ENST00000536876 ERVV-1B6SEH8 477 aa23.35■■□□□ 1.33
LTBR-206ENST00000536876 CTCFP49711 727 aaPredicted RBP23.35■■□□□ 1.33
LTBR-206ENST00000536876 CLEC11AQ9Y240 323 aa23.35■■□□□ 1.33
LTBR-206ENST00000536876 HOXA10P31260 410 aaPredicted RBP23.34■■□□□ 1.33
LTBR-206ENST00000536876 SCNN1DP51172 638 aa23.34■■□□□ 1.33
LTBR-206ENST00000536876 FMR1Q06787 632 aaKnown RBP eCLIP23.34■■□□□ 1.33
LTBR-206ENST00000536876 PNMA8AQ86V59 439 aaPredicted RBP23.34■■□□□ 1.33
LTBR-206ENST00000536876 NGEFQ8N5V2 710 aa23.34■■□□□ 1.33
LTBR-206ENST00000536876 HSPA8P11142 646 aaKnown RBP23.33■■□□□ 1.33
LTBR-206ENST00000536876 EIF4A1P60842 406 aaKnown RBP23.33■■□□□ 1.33
LTBR-206ENST00000536876 THUMPD2Q9BTF0 503 aaKnown RBP23.33■■□□□ 1.33
LTBR-206ENST00000536876 NYXQ9GZU5 481 aa23.33■■□□□ 1.33
LTBR-206ENST00000536876 NTSR2O95665 410 aa23.32■■□□□ 1.32
LTBR-206ENST00000536876 GPTP24298 496 aa23.32■■□□□ 1.32
LTBR-206ENST00000536876 LBX1P52954 281 aa23.32■■□□□ 1.32
LTBR-206ENST00000536876 SUSD4Q5VX71 490 aa23.32■■□□□ 1.32
LTBR-206ENST00000536876 PLEKHF1Q96S99 279 aa23.32■■□□□ 1.32
LTBR-206ENST00000536876 TAF1P21675 1872 aa23.32■■□□□ 1.32
LTBR-206ENST00000536876 GTF2E1P29083 439 aaPredicted RBP23.31■■□□□ 1.32
LTBR-206ENST00000536876 ZNF34Q8IZ26 560 aa23.31■■□□□ 1.32
LTBR-206ENST00000536876 AIDAQ96BJ3 306 aa23.31■■□□□ 1.32
LTBR-206ENST00000536876 ZBTB3Q9H5J0 574 aa23.31■■□□□ 1.32
LTBR-206ENST00000536876 EPS15P42566 896 aa23.3■■□□□ 1.32
LTBR-206ENST00000536876 LRP10Q7Z4F1 713 aa23.3■■□□□ 1.32
LTBR-206ENST00000536876 DDX21Q9NR30 783 aaKnown RBP eCLIP23.3■■□□□ 1.32
LTBR-206ENST00000536876 GJA3Q9Y6H8 435 aa23.3■■□□□ 1.32
LTBR-206ENST00000536876 WDR33Q9C0J8 1336 aaKnown RBP23.3■■□□□ 1.32
LTBR-206ENST00000536876 LRRC37AA6NMS7 1700 aa23.29■■□□□ 1.32
LTBR-206ENST00000536876 DEFB115Q30KQ5 88 aa23.29■■□□□ 1.32
LTBR-206ENST00000536876 CC2D2BQ6DHV5 1058 aa23.29■■□□□ 1.32
LTBR-206ENST00000536876 JDP2Q8WYK2 163 aa23.29■■□□□ 1.32
LTBR-206ENST00000536876 RRP7AQ9Y3A4 280 aaKnown RBP23.29■■□□□ 1.32
LTBR-206ENST00000536876 DUOX1Q9NRD9 1551 aa23.28■■□□□ 1.32
LTBR-206ENST00000536876 PPEF1O14829 653 aaPredicted RBP23.28■■□□□ 1.32
LTBR-206ENST00000536876 MYL6BP14649 208 aa23.28■■□□□ 1.32
LTBR-206ENST00000536876 KIF6Q6ZMV9 814 aa23.28■■□□□ 1.32
LTBR-206ENST00000536876 RPGRQ92834 1020 aaKnown RBP23.28■■□□□ 1.32
LTBR-206ENST00000536876 EIF6P56537 245 aaKnown RBP23.27■■□□□ 1.32
LTBR-206ENST00000536876 CRAMP1Q96RY5 1269 aa23.27■■□□□ 1.32
LTBR-206ENST00000536876 DDX60Q8IY21 1712 aaKnown RBP23.27■■□□□ 1.32
LTBR-206ENST00000536876 LARGE2Q8N3Y3 721 aa23.26■■□□□ 1.31
LTBR-206ENST00000536876 PNISRQ8TF01 805 aaKnown RBP23.26■■□□□ 1.31
LTBR-206ENST00000536876 ABT1Q9ULW3 272 aaKnown RBP23.26■■□□□ 1.31
LTBR-206ENST00000536876 TRAF5O00463 557 aa23.25■■□□□ 1.31
LTBR-206ENST00000536876 NFE2L2Q16236 605 aa23.25■■□□□ 1.31
LTBR-206ENST00000536876 GIGYF2Q6Y7W6 1299 aaKnown RBP23.25■■□□□ 1.31
LTBR-206ENST00000536876 PDIA6Q15084 440 aa23.24■■□□□ 1.31
LTBR-206ENST00000536876 CST9Q5W186 159 aa23.24■■□□□ 1.31
LTBR-206ENST00000536876 COL4A1P02462 1669 aa23.24■■□□□ 1.31
LTBR-206ENST00000536876 ERBB4Q15303 1308 aa23.24■■□□□ 1.31
LTBR-206ENST00000536876 TCERG1O14776 1098 aaKnown RBP23.23■■□□□ 1.31
LTBR-206ENST00000536876 LMOD1P29536 600 aaPredicted RBP23.23■■□□□ 1.31
LTBR-206ENST00000536876 PROSER3Q2NL68 480 aa23.23■■□□□ 1.31
LTBR-206ENST00000536876 RBM17Q96I25 401 aaKnown RBP23.23■■□□□ 1.31
LTBR-206ENST00000536876 ABCC4O15439 1325 aa23.23■■□□□ 1.31
LTBR-206ENST00000536876 AOC3Q16853 763 aa23.22■■□□□ 1.31
LTBR-206ENST00000536876 CAPNS2Q96L46 248 aa23.22■■□□□ 1.31
LTBR-206ENST00000536876 PPIP5K2O43314 1243 aa23.21■■□□□ 1.31
LTBR-206ENST00000536876 GRIPAP1Q4V328 841 aa23.21■■□□□ 1.31
LTBR-206ENST00000536876 CYP4F22Q6NT55 531 aa23.21■■□□□ 1.31
LTBR-206ENST00000536876 USP50Q70EL3 339 aaPredicted RBP23.21■■□□□ 1.31
LTBR-206ENST00000536876 NIM1KQ8IY84 436 aa23.21■■□□□ 1.31
LTBR-206ENST00000536876 ABHD8Q96I13 439 aa23.21■■□□□ 1.31
LTBR-206ENST00000536876 ANXA1P04083 346 aa23.2■■□□□ 1.3
LTBR-206ENST00000536876 MAP2K1Q02750 393 aaPredicted RBP23.2■■□□□ 1.3
LTBR-206ENST00000536876 GPRC5DQ9NZD1 345 aa23.2■■□□□ 1.3
LTBR-206ENST00000536876 ATP6V0A2Q9Y487 856 aa23.2■■□□□ 1.3
LTBR-206ENST00000536876 RTFDC1Q9BY42 306 aaPredicted RBP23.19■■□□□ 1.3
LTBR-206ENST00000536876 TLL2Q9Y6L7 1015 aa23.19■■□□□ 1.3
LTBR-206ENST00000536876 CXCL9Q07325 125 aa23.18■■□□□ 1.3
LTBR-206ENST00000536876 PARP10Q53GL7 1025 aa23.18■■□□□ 1.3
LTBR-206ENST00000536876 SLC10A5Q5PT55 438 aa23.18■■□□□ 1.3
LTBR-206ENST00000536876 PPP1R42Q7Z4L9 355 aa23.17■■□□□ 1.3
LTBR-206ENST00000536876 AOC2O75106 756 aa23.16■■□□□ 1.3
LTBR-206ENST00000536876 ADARB2Q9NS39 739 aaKnown RBP23.16■■□□□ 1.3
LTBR-206ENST00000536876 CASP8AP2Q9UKL3 1982 aa23.16■■□□□ 1.3
LTBR-206ENST00000536876 GMPSP49915 693 aaPredicted RBP23.15■■□□□ 1.3
LTBR-206ENST00000536876 NLRP3Q96P20 1036 aa23.15■■□□□ 1.3
LTBR-206ENST00000536876 GPR101Q96P66 508 aaPredicted RBP23.15■■□□□ 1.3
LTBR-206ENST00000536876 UTP14AQ9BVJ6 771 aaKnown RBP23.15■■□□□ 1.3
LTBR-206ENST00000536876 TSPYL4Q9UJ04 414 aa23.15■■□□□ 1.3
LTBR-206ENST00000536876 GRM1Q13255 1194 aa23.14■■□□□ 1.29
LTBR-206ENST00000536876 PAXIP1Q6ZW49 1069 aaPredicted RBP23.14■■□□□ 1.29
LTBR-206ENST00000536876 GLIS2Q9BZE0 524 aaPredicted RBP23.14■■□□□ 1.29
LTBR-206ENST00000536876 VPS33BQ9H267 617 aa23.14■■□□□ 1.29
LTBR-206ENST00000536876 TSKSQ9UJT2 592 aa23.14■■□□□ 1.29
LTBR-206ENST00000536876 ZNRF3Q9ULT6 936 aa23.14■■□□□ 1.29
LTBR-206ENST00000536876 SHTN1A0MZ66 631 aa23.13■■□□□ 1.29
LTBR-206ENST00000536876 NEFMP07197 916 aa23.13■■□□□ 1.29
LTBR-206ENST00000536876 ECE1P42892 770 aa23.13■■□□□ 1.29
LTBR-206ENST00000536876 HIRAP54198 1017 aaPredicted RBP23.13■■□□□ 1.29
LTBR-206ENST00000536876 PGAP2Q9UHJ9 254 aa23.13■■□□□ 1.29
LTBR-206ENST00000536876 POLR2AP24928 1970 aaKnown RBP23.12■■□□□ 1.29
LTBR-206ENST00000536876 MAPK8IP3Q9UPT6 1336 aa23.12■■□□□ 1.29
LTBR-206ENST00000536876 YDJCA8MPS7 323 aa23.12■■□□□ 1.29
LTBR-206ENST00000536876 HCLS1P14317 486 aaPredicted RBP23.12■■□□□ 1.29
LTBR-206ENST00000536876 EIF2S2P20042 333 aaKnown RBP23.12■■□□□ 1.29
LTBR-206ENST00000536876 KIAA2012Q0VF49 1180 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms