RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 KIF3BO15066 747 aa10.61□□□□□ -0.71
CCDC60-203ENST00000536742 ATG7O95352 703 aa10.61□□□□□ -0.71
CCDC60-203ENST00000536742 PDE4CQ08493 712 aa10.61□□□□□ -0.71
CCDC60-203ENST00000536742 ELOAQ14241 798 aaKnown RBP10.61□□□□□ -0.71
CCDC60-203ENST00000536742 CYP2U1Q7Z449 544 aa10.61□□□□□ -0.71
CCDC60-203ENST00000536742 DEPDC4Q8N2C3 294 aa10.61□□□□□ -0.71
CCDC60-203ENST00000536742 ARXQ96QS3 562 aa10.61□□□□□ -0.71
CCDC60-203ENST00000536742 CDCA7Q9BWT1 371 aaPredicted RBP10.61□□□□□ -0.71
CCDC60-203ENST00000536742 C19orf44Q9H6X5 657 aa10.61□□□□□ -0.71
CCDC60-203ENST00000536742 SYCP2Q9BX26 1530 aa10.61□□□□□ -0.71
CCDC60-203ENST00000536742 DHX29Q7Z478 1369 aaKnown RBP10.61□□□□□ -0.71
CCDC60-203ENST00000536742 PNPLA6Q8IY17 1366 aa10.61□□□□□ -0.71
CCDC60-203ENST00000536742 SPHKAPQ2M3C7 1700 aa10.61□□□□□ -0.71
CCDC60-203ENST00000536742 SOS2Q07890 1332 aaPredicted RBP10.6□□□□□ -0.71
CCDC60-203ENST00000536742 TTLL8A6PVC2 850 aa10.6□□□□□ -0.71
CCDC60-203ENST00000536742 LILRA1O75019 489 aa10.6□□□□□ -0.71
CCDC60-203ENST00000536742 RANGAP1P46060 587 aaPredicted RBP10.6□□□□□ -0.71
CCDC60-203ENST00000536742 LARP1Q6PKG0 1096 aaKnown RBP10.6□□□□□ -0.71
CCDC60-203ENST00000536742 LARGE2Q8N3Y3 721 aa10.6□□□□□ -0.71
CCDC60-203ENST00000536742 SLC26A8Q96RN1 970 aa10.6□□□□□ -0.71
CCDC60-203ENST00000536742 TMPRSS4Q9NRS4 437 aa10.6□□□□□ -0.71
CCDC60-203ENST00000536742 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.59□□□□□ -0.71
CCDC60-203ENST00000536742 PRELPP51888 382 aa10.59□□□□□ -0.71
CCDC60-203ENST00000536742 GTF2IP78347 998 aa10.59□□□□□ -0.71
CCDC60-203ENST00000536742 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.59□□□□□ -0.71
CCDC60-203ENST00000536742 CYLDQ9NQC7 956 aa10.59□□□□□ -0.71
CCDC60-203ENST00000536742 RALGAPBQ86X10 1494 aa10.59□□□□□ -0.71
CCDC60-203ENST00000536742 PTCH1Q13635 1447 aa10.58□□□□□ -0.72
CCDC60-203ENST00000536742 KIAA1107Q9UPP5 1409 aa10.58□□□□□ -0.72
CCDC60-203ENST00000536742 TET3O43151 1660 aa10.58□□□□□ -0.72
CCDC60-203ENST00000536742 DNAAF2Q9NVR5 837 aaKnown RBP10.58□□□□□ -0.72
CCDC60-203ENST00000536742 PLEKHH2Q8IVE3 1493 aa10.57□□□□□ -0.72
CCDC60-203ENST00000536742 CHD4Q14839 1912 aa10.57□□□□□ -0.72
CCDC60-203ENST00000536742 TMEM2Q9UHN6 1383 aa10.57□□□□□ -0.72
CCDC60-203ENST00000536742 GNRH1P01148 92 aa10.57□□□□□ -0.72
CCDC60-203ENST00000536742 RASA1P20936 1047 aa10.57□□□□□ -0.72
CCDC60-203ENST00000536742 GMPRP36959 345 aa10.57□□□□□ -0.72
CCDC60-203ENST00000536742 SCTRP47872 440 aa10.57□□□□□ -0.72
CCDC60-203ENST00000536742 RELBQ01201 579 aa10.57□□□□□ -0.72
CCDC60-203ENST00000536742 LCE2CQ5TA81 110 aa10.57□□□□□ -0.72
CCDC60-203ENST00000536742 SIX5Q8N196 739 aa10.57□□□□□ -0.72
CCDC60-203ENST00000536742 OGFOD1Q8N543 542 aa10.57□□□□□ -0.72
CCDC60-203ENST00000536742 AGBL1Q96MI9 1066 aa10.57□□□□□ -0.72
CCDC60-203ENST00000536742 OSBPL3Q9H4L5 887 aa10.57□□□□□ -0.72
CCDC60-203ENST00000536742 DNMT3LQ9UJW3 386 aa10.57□□□□□ -0.72
CCDC60-203ENST00000536742 RBM19Q9Y4C8 960 aaKnown RBP10.57□□□□□ -0.72
CCDC60-203ENST00000536742 ERVK-7P63135 1459 aa10.56□□□□□ -0.72
CCDC60-203ENST00000536742 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.56□□□□□ -0.72
CCDC60-203ENST00000536742 FIGNL2A6NMB9 653 aa10.56□□□□□ -0.72
CCDC60-203ENST00000536742 WASLO00401 505 aaPredicted RBP10.56□□□□□ -0.72
CCDC60-203ENST00000536742 SPINT1O43278 529 aa10.56□□□□□ -0.72
CCDC60-203ENST00000536742 ADH1AP07327 375 aa10.56□□□□□ -0.72
CCDC60-203ENST00000536742 PCDHGA11Q9Y5H2 935 aa10.56□□□□□ -0.72
CCDC60-203ENST00000536742 MAST1Q9Y2H9 1570 aa10.56□□□□□ -0.72
CCDC60-203ENST00000536742 CDC42BPAQ5VT25 1732 aa10.55□□□□□ -0.72
CCDC60-203ENST00000536742 ARHGAP35Q9NRY4 1499 aa10.55□□□□□ -0.72
CCDC60-203ENST00000536742 GPATCH8Q9UKJ3 1502 aaKnown RBP10.55□□□□□ -0.72
CCDC60-203ENST00000536742 USP17L15C9J2P7 530 aa10.55□□□□□ -0.72
CCDC60-203ENST00000536742 USP17L10C9JJH3 530 aa10.55□□□□□ -0.72
CCDC60-203ENST00000536742 USP17L13C9JLJ4 530 aa10.55□□□□□ -0.72
CCDC60-203ENST00000536742 USP17L12C9JPN9 530 aa10.55□□□□□ -0.72
CCDC60-203ENST00000536742 USP17L11C9JVI0 530 aa10.55□□□□□ -0.72
CCDC60-203ENST00000536742 USP17L21D6R901 530 aa10.55□□□□□ -0.72
CCDC60-203ENST00000536742 USP17L18D6R9N7 530 aa10.55□□□□□ -0.72
CCDC60-203ENST00000536742 USP17L22D6RA61 530 aa10.55□□□□□ -0.72
CCDC60-203ENST00000536742 USP17L17D6RBQ6 530 aa10.55□□□□□ -0.72
CCDC60-203ENST00000536742 USP17L19D6RCP7 530 aa10.55□□□□□ -0.72
CCDC60-203ENST00000536742 USP17L20D6RJB6 530 aa10.55□□□□□ -0.72
CCDC60-203ENST00000536742 USP17L24Q0WX57 530 aa10.55□□□□□ -0.72
CCDC60-203ENST00000536742 PTK7Q13308 1070 aa10.55□□□□□ -0.72
CCDC60-203ENST00000536742 ESCO1Q5FWF5 840 aa10.55□□□□□ -0.72
CCDC60-203ENST00000536742 SPON1Q9HCB6 807 aa10.55□□□□□ -0.72
CCDC60-203ENST00000536742 STK17AQ9UEE5 414 aa10.55□□□□□ -0.72
CCDC60-203ENST00000536742 ASXL1Q8IXJ9 1541 aa10.54□□□□□ -0.72
CCDC60-203ENST00000536742 CAMTA1Q9Y6Y1 1673 aa10.54□□□□□ -0.72
CCDC60-203ENST00000536742 ZNF395Q9H8N7 513 aaPredicted RBP10.54□□□□□ -0.72
CCDC60-203ENST00000536742 USTQ9Y2C2 406 aa10.54□□□□□ -0.72
CCDC60-203ENST00000536742 M0R2N6 131 aa10.53□□□□□ -0.72
CCDC60-203ENST00000536742 CSB-PGBD3P0DP91 1061 aa10.53□□□□□ -0.72
CCDC60-203ENST00000536742 CLDN10P78369 228 aa10.53□□□□□ -0.72
CCDC60-203ENST00000536742 POLMQ9NP87 494 aaPredicted RBP10.53□□□□□ -0.72
CCDC60-203ENST00000536742 BRWD3Q6RI45 1802 aa10.53□□□□□ -0.72
CCDC60-203ENST00000536742 ERBB4Q15303 1308 aa10.53□□□□□ -0.72
CCDC60-203ENST00000536742 CHD2O14647 1828 aaKnown RBP10.52□□□□□ -0.73
CCDC60-203ENST00000536742 PPFIA3O75145 1194 aa10.52□□□□□ -0.73
CCDC60-203ENST00000536742 ADD1P35611 737 aaKnown RBP10.52□□□□□ -0.73
CCDC60-203ENST00000536742 PSME1Q06323 249 aa10.52□□□□□ -0.73
CCDC60-203ENST00000536742 CRTC2Q53ET0 693 aaPredicted RBP10.52□□□□□ -0.73
CCDC60-203ENST00000536742 ANKMY2Q8IV38 441 aa10.52□□□□□ -0.73
CCDC60-203ENST00000536742 INSM2Q96T92 566 aaPredicted RBP10.52□□□□□ -0.73
CCDC60-203ENST00000536742 CAMSAP2Q08AD1 1489 aa10.52□□□□□ -0.73
CCDC60-203ENST00000536742 FMN1Q68DA7 1419 aa10.51□□□□□ -0.73
CCDC60-203ENST00000536742 ZBTB7BO15156 539 aaPredicted RBP10.51□□□□□ -0.73
CCDC60-203ENST00000536742 CCDC102BQ68D86 513 aa10.51□□□□□ -0.73
CCDC60-203ENST00000536742 KRT27Q7Z3Y8 459 aa10.51□□□□□ -0.73
CCDC60-203ENST00000536742 HOMEZQ8IX15 550 aa10.51□□□□□ -0.73
CCDC60-203ENST00000536742 NOVA2Q9UNW9 492 aaKnown RBP10.51□□□□□ -0.73
CCDC60-203ENST00000536742 BACH1O14867 736 aa10.5□□□□□ -0.73
CCDC60-203ENST00000536742 KCNQ2O43526 872 aa10.5□□□□□ -0.73
CCDC60-203ENST00000536742 PTGIRP43119 386 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms