RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 IP6K1Q92551 441 aa15.24■□□□□ 0.03
PTPN21-202ENST00000536337 TMEM2Q9UHN6 1383 aa15.24■□□□□ 0.03
PTPN21-202ENST00000536337 CDK11BP21127 795 aaKnown RBP15.24■□□□□ 0.03
PTPN21-202ENST00000536337 ANO6Q4KMQ2 910 aa15.24■□□□□ 0.03
PTPN21-202ENST00000536337 RUFY3Q7L099 469 aa15.24■□□□□ 0.03
PTPN21-202ENST00000536337 CCDC186Q7Z3E2 898 aa15.24■□□□□ 0.03
PTPN21-202ENST00000536337 FAM177A1Q8N128 213 aaPredicted RBP15.24■□□□□ 0.03
PTPN21-202ENST00000536337 SUCLG2Q96I99 432 aa15.24■□□□□ 0.03
PTPN21-202ENST00000536337 MAP7D2Q96T17 732 aa15.24■□□□□ 0.03
PTPN21-202ENST00000536337 LRRFIP1Q32MZ4 808 aaKnown RBP15.24■□□□□ 0.03
PTPN21-202ENST00000536337 HSP90AB3PQ58FF7 597 aa15.24■□□□□ 0.03
PTPN21-202ENST00000536337 Q6ZUG5 572 aa15.24■□□□□ 0.03
PTPN21-202ENST00000536337 PPP1R9BQ96SB3 815 aa15.24■□□□□ 0.03
PTPN21-202ENST00000536337 NEO1Q92859 1461 aa15.23■□□□□ 0.03
PTPN21-202ENST00000536337 PES1O00541 588 aaKnown RBP15.23■□□□□ 0.03
PTPN21-202ENST00000536337 RNMTO43148 476 aaKnown RBP15.23■□□□□ 0.03
PTPN21-202ENST00000536337 TIMM10P62072 90 aa15.23■□□□□ 0.03
PTPN21-202ENST00000536337 DNAJC25Q9H1X3 360 aa15.23■□□□□ 0.03
PTPN21-202ENST00000536337 CNNM1Q9NRU3 951 aa15.23■□□□□ 0.03
PTPN21-202ENST00000536337 SETD1BQ9UPS6 1966 aaKnown RBP15.23■□□□□ 0.03
PTPN21-202ENST00000536337 IBTKQ9P2D0 1353 aaPredicted RBP15.23■□□□□ 0.03
PTPN21-202ENST00000536337 CCDC171Q6TFL3 1326 aa15.23■□□□□ 0.03
PTPN21-202ENST00000536337 IDH1O75874 414 aaKnown RBP15.23■□□□□ 0.03
PTPN21-202ENST00000536337 TFCP2Q12800 502 aa15.23■□□□□ 0.03
PTPN21-202ENST00000536337 TBX22Q9Y458 520 aa15.23■□□□□ 0.03
PTPN21-202ENST00000536337 SPDYE4A6NLX3 237 aa15.23■□□□□ 0.03
PTPN21-202ENST00000536337 DDX17Q92841 729 aaKnown RBP15.23■□□□□ 0.03
PTPN21-202ENST00000536337 EAF2Q96CJ1 260 aaPredicted RBP15.23■□□□□ 0.03
PTPN21-202ENST00000536337 ME3Q16798 604 aa15.22■□□□□ 0.03
PTPN21-202ENST00000536337 ZNF771Q7L3S4 317 aaPredicted RBP15.22■□□□□ 0.03
PTPN21-202ENST00000536337 PDILTQ8N807 584 aa15.22■□□□□ 0.03
PTPN21-202ENST00000536337 OSBPL3Q9H4L5 887 aa15.22■□□□□ 0.03
PTPN21-202ENST00000536337 RASSF8Q8NHQ8 419 aa15.22■□□□□ 0.03
PTPN21-202ENST00000536337 ZNF396Q96N95 335 aaPredicted RBP15.22■□□□□ 0.03
PTPN21-202ENST00000536337 ALDH1L1O75891 902 aa15.22■□□□□ 0.03
PTPN21-202ENST00000536337 CLIP2Q9UDT6 1046 aa15.22■□□□□ 0.03
PTPN21-202ENST00000536337 HECW2Q9P2P5 1572 aa15.22■□□□□ 0.03
PTPN21-202ENST00000536337 GPTP24298 496 aa15.21■□□□□ 0.03
PTPN21-202ENST00000536337 BEND3Q5T5X7 828 aa15.21■□□□□ 0.03
PTPN21-202ENST00000536337 CCDC144CPQ8IYA2 1237 aa15.21■□□□□ 0.03
PTPN21-202ENST00000536337 TTC41PQ6P2S7 1318 aa15.21■□□□□ 0.03
PTPN21-202ENST00000536337 VPS53Q5VIR6 699 aa15.21■□□□□ 0.03
PTPN21-202ENST00000536337 CDC37L1Q7L3B6 337 aa15.21■□□□□ 0.03
PTPN21-202ENST00000536337 KIF24Q5T7B8 1368 aa15.21■□□□□ 0.03
PTPN21-202ENST00000536337 LARGE1O95461 756 aa15.21■□□□□ 0.02
PTPN21-202ENST00000536337 TPM3P06753 285 aa15.21■□□□□ 0.02
PTPN21-202ENST00000536337 PTGS1P23219 599 aa15.21■□□□□ 0.02
PTPN21-202ENST00000536337 CCDC112Q8NEF3 446 aa15.21■□□□□ 0.02
PTPN21-202ENST00000536337 NAT10Q9H0A0 1025 aaKnown RBP15.21■□□□□ 0.02
PTPN21-202ENST00000536337 MTMR7Q9Y216 660 aa15.21■□□□□ 0.02
PTPN21-202ENST00000536337 JAK2O60674 1132 aa15.2■□□□□ 0.02
PTPN21-202ENST00000536337 ATP7BP35670 1465 aa15.2■□□□□ 0.02
PTPN21-202ENST00000536337 ADGRB1O14514 1584 aa15.2■□□□□ 0.02
PTPN21-202ENST00000536337 MCM5P33992 734 aa15.2■□□□□ 0.02
PTPN21-202ENST00000536337 ERCC4Q92889 916 aaPredicted RBP15.2■□□□□ 0.02
PTPN21-202ENST00000536337 SEC62Q99442 399 aaKnown RBP15.2■□□□□ 0.02
PTPN21-202ENST00000536337 DBNDD2Q9BQY9 259 aa15.2■□□□□ 0.02
PTPN21-202ENST00000536337 SLC27A2O14975 620 aa15.2■□□□□ 0.02
PTPN21-202ENST00000536337 FSIP1Q8NA03 581 aa15.2■□□□□ 0.02
PTPN21-202ENST00000536337 TLR7Q9NYK1 1049 aaKnown RBP15.2■□□□□ 0.02
PTPN21-202ENST00000536337 ARAP3Q8WWN8 1544 aa15.2■□□□□ 0.02
PTPN21-202ENST00000536337 AKAP17AQ02040 695 aaKnown RBP15.19■□□□□ 0.02
PTPN21-202ENST00000536337 TYRO3Q06418 890 aa15.19■□□□□ 0.02
PTPN21-202ENST00000536337 A0A0D9SFI3 127 aa15.19■□□□□ 0.02
PTPN21-202ENST00000536337 APOBRQ0VD83 1088 aa15.19■□□□□ 0.02
PTPN21-202ENST00000536337 IL25Q9H293 177 aa15.19■□□□□ 0.02
PTPN21-202ENST00000536337 U3KPZ7 1027 aaPredicted RBP15.19■□□□□ 0.02
PTPN21-202ENST00000536337 CCAR1Q8IX12 1150 aaKnown RBP15.19■□□□□ 0.02
PTPN21-202ENST00000536337 NCOA5Q9HCD5 579 aaKnown RBP15.19■□□□□ 0.02
PTPN21-202ENST00000536337 NLRP1Q9C000 1473 aa15.19■□□□□ 0.02
PTPN21-202ENST00000536337 SNRPA1P09661 255 aaKnown RBP15.18■□□□□ 0.02
PTPN21-202ENST00000536337 UVSSAQ2YD98 709 aa15.18■□□□□ 0.02
PTPN21-202ENST00000536337 PDCL2Q8N4E4 241 aa15.18■□□□□ 0.02
PTPN21-202ENST00000536337 TPCN1Q9ULQ1 816 aa15.18■□□□□ 0.02
PTPN21-202ENST00000536337 PTPRMP28827 1452 aa15.18■□□□□ 0.02
PTPN21-202ENST00000536337 IGSF1Q8N6C5 1336 aa15.18■□□□□ 0.02
PTPN21-202ENST00000536337 TNNT1P13805 278 aa15.18■□□□□ 0.02
PTPN21-202ENST00000536337 MTERF4Q7Z6M4 381 aaKnown RBP15.18■□□□□ 0.02
PTPN21-202ENST00000536337 IFNL2Q8IZJ0 200 aa15.18■□□□□ 0.02
PTPN21-202ENST00000536337 DDX21Q9NR30 783 aaKnown RBP eCLIP15.18■□□□□ 0.02
PTPN21-202ENST00000536337 STAP2Q9UGK3 403 aa15.18■□□□□ 0.02
PTPN21-202ENST00000536337 SETBP1Q9Y6X0 1596 aa15.18■□□□□ 0.02
PTPN21-202ENST00000536337 HS1BP3Q53T59 392 aa15.18■□□□□ 0.02
PTPN21-202ENST00000536337 FAM200AQ8TCP9 573 aa15.18■□□□□ 0.02
PTPN21-202ENST00000536337 LSG1Q9H089 658 aaKnown RBP15.18■□□□□ 0.02
PTPN21-202ENST00000536337 GIGYF1O75420 1035 aaPredicted RBP15.17■□□□□ 0.02
PTPN21-202ENST00000536337 ALKQ9UM73 1620 aa15.17■□□□□ 0.02
PTPN21-202ENST00000536337 IGSF3O75054 1194 aa15.17■□□□□ 0.02
PTPN21-202ENST00000536337 HSP90AA4PQ58FG1 418 aa15.17■□□□□ 0.02
PTPN21-202ENST00000536337 CEP57L1Q8IYX8 460 aa15.17■□□□□ 0.02
PTPN21-202ENST00000536337 ARHGEF10O15013 1369 aa15.17■□□□□ 0.02
PTPN21-202ENST00000536337 CDK12Q9NYV4 1490 aaPredicted RBP15.17■□□□□ 0.02
PTPN21-202ENST00000536337 SERPINC1P01008 464 aa15.17■□□□□ 0.02
PTPN21-202ENST00000536337 LIG1P18858 919 aa15.17■□□□□ 0.02
PTPN21-202ENST00000536337 ZNF790Q6PG37 636 aa15.17■□□□□ 0.02
PTPN21-202ENST00000536337 ZNF496Q96IT1 587 aaPredicted RBP15.17■□□□□ 0.02
PTPN21-202ENST00000536337 ZNF594Q96JF6 807 aaPredicted RBP15.17■□□□□ 0.02
PTPN21-202ENST00000536337 USP16Q9Y5T5 823 aa15.17■□□□□ 0.02
PTPN21-202ENST00000536337 USP6P35125 1406 aa15.17■□□□□ 0.02
PTPN21-202ENST00000536337 KIDINS220Q9ULH0 1771 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms