RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 BMS1Q14692 1282 aaKnown RBP4.49□□□□□ -1.69
MCF2-210ENST00000536274 ELF2Q15723 593 aa4.49□□□□□ -1.69
MCF2-210ENST00000536274 NCAPGQ9BPX3 1015 aa4.49□□□□□ -1.69
MCF2-210ENST00000536274 YY1AP1Q9H869 796 aa4.49□□□□□ -1.69
MCF2-210ENST00000536274 SH3BP1Q9Y3L3 701 aa4.49□□□□□ -1.69
MCF2-210ENST00000536274 TNS3Q68CZ2 1445 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 NPHP3Q7Z494 1330 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 CCDC172P0C7W6 258 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 HOXB1P14653 301 aaPredicted RBP4.48□□□□□ -1.69
MCF2-210ENST00000536274 IBSPP21815 317 aaPredicted RBP4.48□□□□□ -1.69
MCF2-210ENST00000536274 CYP2C19P33261 490 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 CHAF1AQ13111 956 aaPredicted RBP4.48□□□□□ -1.69
MCF2-210ENST00000536274 FOXR1Q6PIV2 292 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 CCDC191Q8NCU4 936 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 TSPY26PQ9H489 355 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 PLEKHA4Q9H4M7 779 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 EFCC1Q9HA90 598 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 PLSCR2Q9NRY7 297 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 NRBP1Q9UHY1 535 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 CASZ1Q86V15 1759 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 PTGS1P23219 599 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 SMARCE1Q969G3 411 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 CALR3Q96L12 384 aaKnown RBP4.48□□□□□ -1.69
MCF2-210ENST00000536274 SUFUQ9UMX1 484 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 LMO7Q8WWI1 1683 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 QRICH2Q9H0J4 1663 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 CDAN1Q8IWY9 1227 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 KIAA1524Q8TCG1 905 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.48□□□□□ -1.69
MCF2-210ENST00000536274 ZNF215Q9UL58 517 aaPredicted RBP4.48□□□□□ -1.69
MCF2-210ENST00000536274 TULP4Q9NRJ4 1543 aa4.48□□□□□ -1.69
MCF2-210ENST00000536274 PEAK1Q9H792 1746 aa4.47□□□□□ -1.69
MCF2-210ENST00000536274 CASQ1P31415 396 aa4.47□□□□□ -1.69
MCF2-210ENST00000536274 PPP2R5AQ15172 486 aa4.47□□□□□ -1.69
MCF2-210ENST00000536274 EPC1Q9H2F5 836 aa4.47□□□□□ -1.69
MCF2-210ENST00000536274 SPTLC3Q9NUV7 552 aa4.47□□□□□ -1.69
MCF2-210ENST00000536274 JRKLQ9Y4A0 524 aa4.47□□□□□ -1.69
MCF2-210ENST00000536274 USP27XA6NNY8 438 aa4.47□□□□□ -1.69
MCF2-210ENST00000536274 GUCY2CP25092 1073 aa4.47□□□□□ -1.69
MCF2-210ENST00000536274 MEX3CQ5U5Q3 659 aaKnown RBP4.47□□□□□ -1.69
MCF2-210ENST00000536274 CWC27Q6UX04 472 aaKnown RBP4.47□□□□□ -1.69
MCF2-210ENST00000536274 DIAPH3Q9NSV4 1193 aa4.47□□□□□ -1.69
MCF2-210ENST00000536274 IFT57Q9NWB7 429 aa4.47□□□□□ -1.69
MCF2-210ENST00000536274 LRRFIP2Q9Y608 721 aaKnown RBP4.47□□□□□ -1.69
MCF2-210ENST00000536274 SEC31AO94979 1220 aaKnown RBP4.47□□□□□ -1.69
MCF2-210ENST00000536274 OS9Q13438 667 aaPredicted RBP4.47□□□□□ -1.69
MCF2-210ENST00000536274 BIRC2Q13490 618 aa4.47□□□□□ -1.69
MCF2-210ENST00000536274 TTC19Q6DKK2 380 aaPredicted RBP4.47□□□□□ -1.69
MCF2-210ENST00000536274 CXorf56Q9H5V9 222 aa4.47□□□□□ -1.69
MCF2-210ENST00000536274 PHF8Q9UPP1 1060 aa4.47□□□□□ -1.69
MCF2-210ENST00000536274 AMOTL2Q9Y2J4 779 aa4.47□□□□□ -1.69
MCF2-210ENST00000536274 IBTKQ9P2D0 1353 aaPredicted RBP4.46□□□□□ -1.69
MCF2-210ENST00000536274 KIF16BQ96L93 1317 aa4.46□□□□□ -1.7
MCF2-210ENST00000536274 SCP2P22307 547 aa4.46□□□□□ -1.7
MCF2-210ENST00000536274 TDO2P48775 406 aa4.46□□□□□ -1.7
MCF2-210ENST00000536274 ARID5BQ14865 1188 aa4.46□□□□□ -1.7
MCF2-210ENST00000536274 AXDND1Q5T1B0 1012 aaPredicted RBP4.46□□□□□ -1.7
MCF2-210ENST00000536274 ARMC3Q5W041 872 aa4.46□□□□□ -1.7
MCF2-210ENST00000536274 SNX21Q969T3 373 aa4.46□□□□□ -1.7
MCF2-210ENST00000536274 SRRTQ9BXP5 876 aaKnown RBP4.46□□□□□ -1.7
MCF2-210ENST00000536274 METP08581 1390 aa4.46□□□□□ -1.7
MCF2-210ENST00000536274 PER1O15534 1290 aaPredicted RBP4.46□□□□□ -1.7
MCF2-210ENST00000536274 GRIPAP1Q4V328 841 aa4.46□□□□□ -1.7
MCF2-210ENST00000536274 TRMT1Q9NXH9 659 aaKnown RBP4.46□□□□□ -1.7
MCF2-210ENST00000536274 CHMP3Q9Y3E7 222 aa4.46□□□□□ -1.7
MCF2-210ENST00000536274 CGNL1Q0VF96 1302 aa4.46□□□□□ -1.7
MCF2-210ENST00000536274 FAM208AQ9UK61 1670 aaKnown RBP4.45□□□□□ -1.7
MCF2-210ENST00000536274 PLA2G4AP47712 749 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 PMFBP1Q8TBY8 1022 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 BORCS6Q96GS4 357 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 CCDC34Q96HJ3 373 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 SLC26A8Q96RN1 970 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 ATG3Q9NT62 314 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 NINLQ9Y2I6 1382 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 ARHGEF28Q8N1W1 1705 aaKnown RBP4.45□□□□□ -1.7
MCF2-210ENST00000536274 ADGRB1O14514 1584 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 ERBB3P21860 1342 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 CAMTA1Q9Y6Y1 1673 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 CCDC189A1A4V9 331 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 PBX2P40425 430 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 RBM5P52756 815 aaKnown RBP eCLIP4.45□□□□□ -1.7
MCF2-210ENST00000536274 DHX8Q14562 1220 aaKnown RBP4.45□□□□□ -1.7
MCF2-210ENST00000536274 ERCC6LQ2NKX8 1250 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 GORABQ5T7V8 394 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 GIMAP6Q6P9H5 292 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 CCDC112Q8NEF3 446 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 RRP15Q9Y3B9 282 aaKnown RBP4.45□□□□□ -1.7
MCF2-210ENST00000536274 AATKQ6ZMQ8 1374 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 ZNF521Q96K83 1311 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 HSP90B1P14625 803 aaKnown RBP4.45□□□□□ -1.7
MCF2-210ENST00000536274 VPS72Q15906 364 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 ZSCAN26Q16670 478 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 CCDC186Q7Z3E2 898 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 PIK3R5Q8WYR1 880 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 RWDD1Q9H446 243 aaPredicted RBP4.45□□□□□ -1.7
MCF2-210ENST00000536274 NRKQ7Z2Y5 1582 aa4.45□□□□□ -1.7
MCF2-210ENST00000536274 ROCK2O75116 1388 aaKnown RBP4.44□□□□□ -1.7
MCF2-210ENST00000536274 NUP155O75694 1391 aa4.44□□□□□ -1.7
MCF2-210ENST00000536274 SLC34A2O95436 690 aa4.44□□□□□ -1.7
MCF2-210ENST00000536274 CT47B1P0C2W7 299 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms